BLASTX nr result

ID: Atractylodes21_contig00005776 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00005776
         (568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313372.1| f-box family protein [Populus trichocarpa] g...    67   2e-09
ref|XP_002279458.1| PREDICTED: F-box protein At4g18380-like [Vit...    64   2e-08
gb|ADE76154.1| unknown [Picea sitchensis]                              57   2e-06
ref|XP_002531125.1| conserved hypothetical protein [Ricinus comm...    56   5e-06
ref|XP_003542943.1| PREDICTED: F-box protein At5g46170-like [Gly...    55   8e-06

>ref|XP_002313372.1| f-box family protein [Populus trichocarpa]
           gi|222849780|gb|EEE87327.1| f-box family protein
           [Populus trichocarpa]
          Length = 361

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 5/154 (3%)
 Frame = -3

Query: 470 HSPGFLQISKMDGDADYATSLT-----RLPDEIILQILSKLIDLKTLCCCHLVSRRFSAI 306
           HSP F    K   + D  +S+      RLPD ++L I +K+ D K+L  C  VS+RF+++
Sbjct: 4   HSPHFNTSEKFP-NTDPMSSMEEDCFDRLPDALLLVIFNKVGDAKSLTRCISVSKRFASL 62

Query: 305 VLQVDTISFTAPLLIPPKNTSGDVDGGGFPKKLFWFLINGVVFKPLHVLRRMVVASTRPL 126
           V + DT+     L IPP+  +   D     + LF  LI+ ++ KPLH   R +   +   
Sbjct: 63  VFEADTVF----LSIPPRKHNPKADNRSLRRNLFKILISTLIAKPLHFFHRFIADRSDTD 118

Query: 125 PPIISSFYGESFRSAVSFLSKFRGVKSLCIELPS 24
              +      SF S    L  F+  K++ +ELPS
Sbjct: 119 RKTV------SFYSPKEVLKHFQQAKTMHMELPS 146


>ref|XP_002279458.1| PREDICTED: F-box protein At4g18380-like [Vitis vinifera]
          Length = 341

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 39/126 (30%), Positives = 65/126 (51%)
 Frame = -3

Query: 404 RLPDEIILQILSKLIDLKTLCCCHLVSRRFSAIVLQVDTISFTAPLLIPPKNTSGDVDGG 225
           RL DE++  I +K++D K+LC C +VS+RF++++ Q D +S     LI P + +     G
Sbjct: 13  RLSDELVTLIFNKVLDAKSLCRCSVVSKRFASLIPQTDNVS-----LIVPSSNNSKPKRG 67

Query: 224 GFPKKLFWFLINGVVFKPLHVLRRMVVASTRPLPPIISSFYGESFRSAVSFLSKFRGVKS 45
            F      +L+   + KPL  L + VV         ++S   E+++     L  F  +K 
Sbjct: 68  TFFIVFLKYLVGKFITKPLQFLYQTVVPKLS-----VNSDEDETYQFTTEVLRNFINIKR 122

Query: 44  LCIELP 27
           L I+LP
Sbjct: 123 LSIQLP 128


>gb|ADE76154.1| unknown [Picea sitchensis]
          Length = 348

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 40/128 (31%), Positives = 64/128 (50%)
 Frame = -3

Query: 410 LTRLPDEIILQILSKLIDLKTLCCCHLVSRRFSAIVLQVDTISFTAPLLIPPKNTSGDVD 231
           L R+PD ++L I +K+ D+K L  C  VS+RF+ +V QV+ +      +I  ++   +  
Sbjct: 7   LDRIPDSLLLLIFNKVADIKALGRCCAVSKRFNFLVPQVENVVVKVDCVISGEDGGLNAK 66

Query: 230 GGGFPKKLFWFLINGVVFKPLHVLRRMVVASTRPLPPIISSFYGESFRSAVSFLSKFRGV 51
           G G    L  F+I  +V KPL  L+  +     P   I++     S  S    L  F+ +
Sbjct: 67  GKGIIGHLVRFMIGSIV-KPLQALQHFI----GPRKAILAEV---SHHSPAEVLKNFKEI 118

Query: 50  KSLCIELP 27
           + L IELP
Sbjct: 119 QHLRIELP 126


>ref|XP_002531125.1| conserved hypothetical protein [Ricinus communis]
           gi|223529289|gb|EEF31259.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 356

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 42/125 (33%), Positives = 60/125 (48%)
 Frame = -3

Query: 401 LPDEIILQILSKLIDLKTLCCCHLVSRRFSAIVLQVDTISFTAPLLIPPKNTSGDVDGGG 222
           LPD ++L I +KL D ++L  C LVS+RFS++V Q D +  + P    PK  S       
Sbjct: 18  LPDSLLLLIFNKLCDSRSLAQCLLVSKRFSSLVFQADNVFLSIP---TPKPKSASSHRNR 74

Query: 221 FPKKLFWFLINGVVFKPLHVLRRMVVASTRPLPPIISSFYGESFRSAVSFLSKFRGVKSL 42
             + L   L++  + KPL      V A   P      S+Y     S    L  F+ VKSL
Sbjct: 75  ASRNLLRTLVHKFIAKPLQFF-PCVAAPKSPGNSGCISYY-----SPNEVLKHFKNVKSL 128

Query: 41  CIELP 27
            I++P
Sbjct: 129 HIKVP 133


>ref|XP_003542943.1| PREDICTED: F-box protein At5g46170-like [Glycine max]
          Length = 387

 Score = 55.1 bits (131), Expect = 8e-06
 Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 20/156 (12%)
 Frame = -3

Query: 431 DADYATSLTRLPDEIILQILSKLIDLKTLCCCHLVSRRFSAIVLQVDTISFTAPLLIPPK 252
           DA       RLPD ++L + +K+ D+K L  C +VSRRF ++V QV+ +      +I   
Sbjct: 17  DASEIDHFDRLPDSLLLLVFNKIGDVKALGRCCVVSRRFHSLVPQVENVVVRVDCVISDD 76

Query: 251 NTSGDVDGGGFPKKLFWFLIN---GVVFKPLHVLRRMV------------VASTRPLPPI 117
           ++S         +  FW L+    G + KP+  L + +             +ST    P+
Sbjct: 77  DSSSSAAASDKSRGPFWNLLRLVFGGIVKPIQTLGQFLGPKRPSSSSVTSPSSTTSSSPL 136

Query: 116 I-----SSFYGESFRSAVSFLSKFRGVKSLCIELPS 24
                  S  G +  S    L  F  ++ L IELPS
Sbjct: 137 AVGTDDDSDAGVTHHSPTQVLKNFNEIRLLRIELPS 172


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