BLASTX nr result

ID: Atractylodes21_contig00005761 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00005761
         (850 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282478.1| PREDICTED: protein DCL, chloroplastic [Vitis...   243   4e-62
ref|XP_002284778.1| PREDICTED: protein DCL, chloroplastic-like i...   231   2e-58
ref|XP_004141259.1| PREDICTED: protein DCL, chloroplastic-like [...   226   5e-57
ref|NP_001233874.1| protein DCL, chloroplastic [Solanum lycopers...   224   2e-56
ref|XP_002326941.1| predicted protein [Populus trichocarpa] gi|2...   224   2e-56

>ref|XP_002282478.1| PREDICTED: protein DCL, chloroplastic [Vitis vinifera]
           gi|147773590|emb|CAN69898.1| hypothetical protein
           VITISV_032063 [Vitis vinifera]
          Length = 205

 Score =  243 bits (620), Expect = 4e-62
 Identities = 127/201 (63%), Positives = 145/201 (72%), Gaps = 3/201 (1%)
 Frame = +3

Query: 69  SPPLRFHLSSTNPSVF--SFPYCCTTPSQQRS-SALKTTTSGGAGYSAADLLRKPRTEGK 239
           SPPL+ H   TNP     S P       +  S  ALKT + G       DLLRKP     
Sbjct: 8   SPPLQIHHLHTNPISLHPSHPILHFATHRTPSVPALKTASDGSQEVYGPDLLRKPHVSAP 67

Query: 240 DYDRGSSKGVEDDGGKTSWVDWEDQILEDTVPLVGFVRMILHSGKYESGERLSSEHENII 419
           D D G  K  +  GG+  WVDWEDQILEDTVPLVGFVRMILHSGKY SGERLS EHE II
Sbjct: 68  D-DEGDRKRTKRKGGE--WVDWEDQILEDTVPLVGFVRMILHSGKYRSGERLSPEHEKII 124

Query: 420 LQRLLAHHPETEKKIGCGIKYIMVGHHPDFESSRCLFIVRKNGDMVDFSYWKCIKGFIRK 599
           L+RLL +HP  E+KIG GI YI VG+HP+FESSRCLFIVRK+G++VDFSYWKCIKGFIRK
Sbjct: 125 LERLLPYHPGYERKIGSGIDYITVGYHPEFESSRCLFIVRKDGELVDFSYWKCIKGFIRK 184

Query: 600 KYPLHADSFILQHFRRHRLAD 662
            YPL+ADSFIL+HFR+HR ++
Sbjct: 185 NYPLYADSFILRHFRQHRRSE 205


>ref|XP_002284778.1| PREDICTED: protein DCL, chloroplastic-like isoform 1 [Vitis
           vinifera]
          Length = 215

 Score =  231 bits (588), Expect = 2e-58
 Identities = 125/207 (60%), Positives = 147/207 (71%), Gaps = 10/207 (4%)
 Frame = +3

Query: 57  RNPLSPPLRFHLSSTNPSVFSFPYCCTTPSQQRSSALKTTTSGGAGYS----AADLLRKP 224
           RNP+S     HLS   PS+ SFP   TT  +    A K  + GG   S    A+D LRKP
Sbjct: 17  RNPIS----LHLS---PSLRSFPSRQTTSLRPVLCARKPRSPGGKLGSQDARASDFLRKP 69

Query: 225 RTEGKDYDRGSS------KGVEDDGGKTSWVDWEDQILEDTVPLVGFVRMILHSGKYESG 386
                D   GSS      KG E++     WVDWEDQILEDTVPLVG+VRMI+HSGKYE+G
Sbjct: 70  TISPGDDGGGSSVREKSYKGREEE----EWVDWEDQILEDTVPLVGYVRMIIHSGKYENG 125

Query: 387 ERLSSEHENIILQRLLAHHPETEKKIGCGIKYIMVGHHPDFESSRCLFIVRKNGDMVDFS 566
           +RLS EHE  +L++LLA+HPE EKKIGCGI YI VG+HPDFE SRCLFIVR +G++VDFS
Sbjct: 126 DRLSLEHEKFVLEKLLAYHPECEKKIGCGIDYITVGYHPDFEGSRCLFIVRNDGELVDFS 185

Query: 567 YWKCIKGFIRKKYPLHADSFILQHFRR 647
           YWKCIKG IRKKYP +ADSFIL+HF+R
Sbjct: 186 YWKCIKGLIRKKYPQYADSFILRHFQR 212


>ref|XP_004141259.1| PREDICTED: protein DCL, chloroplastic-like [Cucumis sativus]
           gi|449519344|ref|XP_004166695.1| PREDICTED: protein DCL,
           chloroplastic-like [Cucumis sativus]
          Length = 225

 Score =  226 bits (576), Expect = 5e-57
 Identities = 123/215 (57%), Positives = 146/215 (67%), Gaps = 19/215 (8%)
 Frame = +3

Query: 66  LSPPLRFHLSSTNPSVF-SFPYCCTTPSQQRSS------ALKTTTSGGAGYS----AADL 212
           L PP      S NP+ F S P     P+   +S      ALKT   G    S    ++DL
Sbjct: 7   LKPPPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGIRLRSHQEYSSDL 66

Query: 213 LRKP--------RTEGKDYDRGSSKGVEDDGGKTSWVDWEDQILEDTVPLVGFVRMILHS 368
           LRKP            +D D     G ED+  +  WVDWED+ILEDTVPLVGFVRM+LH+
Sbjct: 67  LRKPVGPSAKDLAGPSEDDDSSEESGNEDEE-EVEWVDWEDKILEDTVPLVGFVRMVLHT 125

Query: 369 GKYESGERLSSEHENIILQRLLAHHPETEKKIGCGIKYIMVGHHPDFESSRCLFIVRKNG 548
           GKYE+G+RL  EHE  IL+RLL +HPE+EKKIGCG+ YI VG+HPDFESSRCLFIVRK+G
Sbjct: 126 GKYENGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDG 185

Query: 549 DMVDFSYWKCIKGFIRKKYPLHADSFILQHFRRHR 653
           +MVDFSYWKCIKG IRK YPL+A+SFIL+HFRR R
Sbjct: 186 EMVDFSYWKCIKGLIRKNYPLYAESFILRHFRRRR 220


>ref|NP_001233874.1| protein DCL, chloroplastic [Solanum lycopersicum]
           gi|6014934|sp|Q42463.1|DCL_SOLLC RecName: Full=Protein
           DCL, chloroplastic; AltName: Full=Defective chloroplasts
           and leaves protein; Flags: Precursor
           gi|1305531|gb|AAC49433.1| defective chloroplasts and
           leaves; required for chloroplast development and
           palisade cell differentiation in leaves [Solanum
           lycopersicum] gi|1323698|gb|AAC49434.1| DCL [Solanum
           lycopersicum]
          Length = 224

 Score =  224 bits (571), Expect = 2e-56
 Identities = 127/228 (55%), Positives = 153/228 (67%), Gaps = 11/228 (4%)
 Frame = +3

Query: 12  MESISCSSSHIYLNQRNPLSPPLRFHLSSTNPSVFSFPYCCTTPSQQRSSALKTTTSGGA 191
           M SI  S+ H    + N  S P+  HL   +PS  SF  C       R +A+KT + GG 
Sbjct: 1   MASICTSNFHFLCRKNN--SSPISHHLL-LSPSSLSFSRCGGL-RLCRCAAVKTGSEGGG 56

Query: 192 GYSA-ADLLRKPRTEGKDYDRGSSKGV-----EDDGGKTS-----WVDWEDQILEDTVPL 338
             S  A+LLRKP    +      S+ +     +D+ GK S     WVDWEDQILEDTVPL
Sbjct: 57  IRSDNAELLRKPVISTELETTSESEELVKEESDDEVGKKSGDGEGWVDWEDQILEDTVPL 116

Query: 339 VGFVRMILHSGKYESGERLSSEHENIILQRLLAHHPETEKKIGCGIKYIMVGHHPDFESS 518
           VGFVRMILHSGKY  G+RLS +H+  ILQRLL +HPE +KKIG G+ YI VG+HPDFE+S
Sbjct: 117 VGFVRMILHSGKYAIGDRLSPDHQRTILQRLLPYHPECDKKIGPGVDYITVGYHPDFENS 176

Query: 519 RCLFIVRKNGDMVDFSYWKCIKGFIRKKYPLHADSFILQHFRRHRLAD 662
           RCLFIVRK+G+ VDFSYWKCIKG IRK YPL+ADSFIL+HFR+ R  D
Sbjct: 177 RCLFIVRKDGETVDFSYWKCIKGLIRKNYPLYADSFILRHFRKRRRND 224


>ref|XP_002326941.1| predicted protein [Populus trichocarpa] gi|222835256|gb|EEE73691.1|
           predicted protein [Populus trichocarpa]
          Length = 209

 Score =  224 bits (570), Expect = 2e-56
 Identities = 118/200 (59%), Positives = 143/200 (71%), Gaps = 2/200 (1%)
 Frame = +3

Query: 60  NPLSPPLRFHLSSTNPSVFSFPYCCTTPSQQRSSALKTTTSGGAGYSAADLLRKPRTEGK 239
           NP+S      L S+   V SFP+  T  +  R  A+KT + G      +DLLRKP    +
Sbjct: 20  NPIS------LFSSPAVVLSFPFNRTAFASPRLFAIKTGSDG------SDLLRKPIVPSE 67

Query: 240 DYDRGSSKGVED--DGGKTSWVDWEDQILEDTVPLVGFVRMILHSGKYESGERLSSEHEN 413
               G S+ VED  +  +  +VDWED+ILEDTVPLVGFVRMILHSGKYESG+RLS +HE 
Sbjct: 68  KDLVGISEEVEDSEEEKEEGFVDWEDRILEDTVPLVGFVRMILHSGKYESGDRLSPDHER 127

Query: 414 IILQRLLAHHPETEKKIGCGIKYIMVGHHPDFESSRCLFIVRKNGDMVDFSYWKCIKGFI 593
            I+ RLLA+HP+ + KIGCGI YI VG+HPDF  SRCLFIVRK+G +VDFSYWKCIKG I
Sbjct: 128 TIVDRLLAYHPDCDSKIGCGIDYITVGYHPDFVESRCLFIVRKDGQLVDFSYWKCIKGLI 187

Query: 594 RKKYPLHADSFILQHFRRHR 653
           +K YPL+ADSFIL+HFRR R
Sbjct: 188 KKNYPLYADSFILRHFRRRR 207


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