BLASTX nr result

ID: Atractylodes21_contig00005671 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00005671
         (901 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279785.1| PREDICTED: 60S ribosome subunit biogenesis p...   307   2e-81
ref|XP_002273010.1| PREDICTED: 60S ribosome subunit biogenesis p...   300   2e-79
ref|XP_004134205.1| PREDICTED: 60S ribosome subunit biogenesis p...   295   8e-78
ref|XP_004159812.1| PREDICTED: 60S ribosome subunit biogenesis p...   294   2e-77
ref|XP_002870210.1| At4g15770 [Arabidopsis lyrata subsp. lyrata]...   290   4e-76

>ref|XP_002279785.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Vitis vinifera] gi|147783622|emb|CAN68143.1|
           hypothetical protein VITISV_035660 [Vitis vinifera]
          Length = 187

 Score =  307 bits (787), Expect = 2e-81
 Identities = 150/187 (80%), Positives = 163/187 (87%)
 Frame = +2

Query: 197 MRPLDEAETTQVFEKLFKFTGNNLKNIVESPSHEGPDQNPGRYCFRLHKNRVYYVSESLV 376
           MRPLDE ETT VFEKLFKFTGNNLKNIVE+PSHEGPD NPGRYCFRL KNRVYYVSESLV
Sbjct: 1   MRPLDENETTAVFEKLFKFTGNNLKNIVENPSHEGPDPNPGRYCFRLQKNRVYYVSESLV 60

Query: 377 KRATNIKRENLVALGTNIGKFTKSGKFHLTIQXXXXXXXXXKHKVWLKPTSEMSFLYGND 556
           KRATNI R  LV+LGT IGKFTK GKFHLT+Q         KHKVWLKPTSEMSFLYGN 
Sbjct: 61  KRATNIGRAQLVSLGTCIGKFTKGGKFHLTVQSVNLLAANAKHKVWLKPTSEMSFLYGNH 120

Query: 557 VVKGGLGRITDNINAYDGVVVFSMSDLPLGFGIAAKSTQDCRKMDPNGLVVIRQADTGEY 736
           V+KGGLGRIT+NI A DG+VVFSMSD+PLGFGIAAKSTQDCRK+DPNG+VV+ QAD GEY
Sbjct: 121 VLKGGLGRITENIVAGDGIVVFSMSDVPLGFGIAAKSTQDCRKLDPNGIVVLHQADIGEY 180

Query: 737 LRNQEDL 757
           LR +++L
Sbjct: 181 LRMEDEL 187


>ref|XP_002273010.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Vitis vinifera]
          Length = 187

 Score =  300 bits (769), Expect = 2e-79
 Identities = 147/187 (78%), Positives = 162/187 (86%)
 Frame = +2

Query: 197 MRPLDEAETTQVFEKLFKFTGNNLKNIVESPSHEGPDQNPGRYCFRLHKNRVYYVSESLV 376
           MRPLDE ETT VFEKLFKFTGNNLKNIVE+PS+EGPD N GRYCFRL KNRVYYVSES+V
Sbjct: 1   MRPLDENETTAVFEKLFKFTGNNLKNIVENPSYEGPDPNAGRYCFRLQKNRVYYVSESMV 60

Query: 377 KRATNIKRENLVALGTNIGKFTKSGKFHLTIQXXXXXXXXXKHKVWLKPTSEMSFLYGND 556
           KRATNI R  LV+LGT IGKFTK GKFHLT+Q         KHKVWLKPTSEMSFLYGN 
Sbjct: 61  KRATNIGRAQLVSLGTCIGKFTKGGKFHLTVQSVNLLAANAKHKVWLKPTSEMSFLYGNH 120

Query: 557 VVKGGLGRITDNINAYDGVVVFSMSDLPLGFGIAAKSTQDCRKMDPNGLVVIRQADTGEY 736
           V+KGGLGRIT+NI A DGVVVFSMSD+PLGFGIAAKSTQDCRK+DPNG+VV+ Q+D GEY
Sbjct: 121 VLKGGLGRITENIVAGDGVVVFSMSDVPLGFGIAAKSTQDCRKLDPNGIVVLHQSDIGEY 180

Query: 737 LRNQEDL 757
           LR +++L
Sbjct: 181 LRMEDEL 187


>ref|XP_004134205.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Cucumis sativus]
          Length = 187

 Score =  295 bits (756), Expect = 8e-78
 Identities = 142/187 (75%), Positives = 160/187 (85%)
 Frame = +2

Query: 197 MRPLDEAETTQVFEKLFKFTGNNLKNIVESPSHEGPDQNPGRYCFRLHKNRVYYVSESLV 376
           MRPLDE ETT VFEKL KFTGNNLKNIVE+PSHEG + NPGRYCFRLHKN+VYYVS+SLV
Sbjct: 1   MRPLDEQETTVVFEKLHKFTGNNLKNIVENPSHEGTEPNPGRYCFRLHKNKVYYVSDSLV 60

Query: 377 KRATNIKRENLVALGTNIGKFTKSGKFHLTIQXXXXXXXXXKHKVWLKPTSEMSFLYGND 556
           KRATN+ R NLV+LGT IGKFT  G FHLT+Q         KHKVWLKPTSEMSFLYGN 
Sbjct: 61  KRATNVARSNLVSLGTCIGKFTHGGSFHLTVQSLGLLSPNAKHKVWLKPTSEMSFLYGNH 120

Query: 557 VVKGGLGRITDNINAYDGVVVFSMSDLPLGFGIAAKSTQDCRKMDPNGLVVIRQADTGEY 736
           V+KGGLGRIT+NI   DGVVV+SMSD+PLGFGIAAKSTQDCRK+DPNG+VV+ Q+D GEY
Sbjct: 121 VLKGGLGRITENIVPGDGVVVYSMSDVPLGFGIAAKSTQDCRKLDPNGIVVLHQSDIGEY 180

Query: 737 LRNQEDL 757
           LR +++L
Sbjct: 181 LRMEDEL 187


>ref|XP_004159812.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Cucumis sativus]
          Length = 187

 Score =  294 bits (753), Expect = 2e-77
 Identities = 141/187 (75%), Positives = 160/187 (85%)
 Frame = +2

Query: 197 MRPLDEAETTQVFEKLFKFTGNNLKNIVESPSHEGPDQNPGRYCFRLHKNRVYYVSESLV 376
           MRPLDE ETT VFEKL KFTGNNLKNIV++PSHEG + NPGRYCFRLHKN+VYYVS+SLV
Sbjct: 1   MRPLDEQETTVVFEKLHKFTGNNLKNIVDNPSHEGTEPNPGRYCFRLHKNKVYYVSDSLV 60

Query: 377 KRATNIKRENLVALGTNIGKFTKSGKFHLTIQXXXXXXXXXKHKVWLKPTSEMSFLYGND 556
           KRATN+ R NLV+LGT IGKFT  G FHLT+Q         KHKVWLKPTSEMSFLYGN 
Sbjct: 61  KRATNVARSNLVSLGTCIGKFTHGGSFHLTVQSLGLLSPNAKHKVWLKPTSEMSFLYGNH 120

Query: 557 VVKGGLGRITDNINAYDGVVVFSMSDLPLGFGIAAKSTQDCRKMDPNGLVVIRQADTGEY 736
           V+KGGLGRIT+NI   DGVVV+SMSD+PLGFGIAAKSTQDCRK+DPNG+VV+ Q+D GEY
Sbjct: 121 VLKGGLGRITENIVPGDGVVVYSMSDVPLGFGIAAKSTQDCRKLDPNGIVVLHQSDIGEY 180

Query: 737 LRNQEDL 757
           LR +++L
Sbjct: 181 LRMEDEL 187


>ref|XP_002870210.1| At4g15770 [Arabidopsis lyrata subsp. lyrata]
           gi|297316046|gb|EFH46469.1| At4g15770 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 187

 Score =  290 bits (741), Expect = 4e-76
 Identities = 141/187 (75%), Positives = 157/187 (83%)
 Frame = +2

Query: 197 MRPLDEAETTQVFEKLFKFTGNNLKNIVESPSHEGPDQNPGRYCFRLHKNRVYYVSESLV 376
           MRPLDE ETT VFEKLFKF GNNLK IVE+PS EGP+  PG YCFRL KNRVYYVSE+LV
Sbjct: 1   MRPLDETETTVVFEKLFKFVGNNLKKIVENPSDEGPESTPGSYCFRLQKNRVYYVSEALV 60

Query: 377 KRATNIKRENLVALGTNIGKFTKSGKFHLTIQXXXXXXXXXKHKVWLKPTSEMSFLYGND 556
           KRATNI R+NLV+ GT IGK+T +G FHLTI          KHKVWLKPTSEMSFLYGN 
Sbjct: 61  KRATNISRKNLVSFGTCIGKYTHAGSFHLTIMSLNILAANAKHKVWLKPTSEMSFLYGNH 120

Query: 557 VVKGGLGRITDNINAYDGVVVFSMSDLPLGFGIAAKSTQDCRKMDPNGLVVIRQADTGEY 736
           V+KGGLGRITD+I   DGVVVFSMSD+PLGFGIAAKSTQDCRK+DPNG+VV+ QAD GEY
Sbjct: 121 VLKGGLGRITDSIVPGDGVVVFSMSDVPLGFGIAAKSTQDCRKLDPNGIVVLHQADIGEY 180

Query: 737 LRNQEDL 757
           LR+++DL
Sbjct: 181 LRDEDDL 187


Top