BLASTX nr result

ID: Atractylodes21_contig00005670 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00005670
         (850 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279785.1| PREDICTED: 60S ribosome subunit biogenesis p...   306   5e-81
ref|XP_002273010.1| PREDICTED: 60S ribosome subunit biogenesis p...   299   6e-79
ref|XP_004134205.1| PREDICTED: 60S ribosome subunit biogenesis p...   294   2e-77
ref|XP_004159812.1| PREDICTED: 60S ribosome subunit biogenesis p...   293   4e-77
ref|XP_002870210.1| At4g15770 [Arabidopsis lyrata subsp. lyrata]...   288   1e-75

>ref|XP_002279785.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Vitis vinifera] gi|147783622|emb|CAN68143.1|
           hypothetical protein VITISV_035660 [Vitis vinifera]
          Length = 187

 Score =  306 bits (783), Expect = 5e-81
 Identities = 149/186 (80%), Positives = 162/186 (87%)
 Frame = +2

Query: 68  MRPLDEAETTQVFEKLFKFTGNNLKNIVESPSHEGPDQNPGRYCFRLHKNRVYYVSESLV 247
           MRPLDE ETT VFEKLFKFTGNNLKNIVE+PSHEGPD NPGRYCFRL KNRVYYVSESLV
Sbjct: 1   MRPLDENETTAVFEKLFKFTGNNLKNIVENPSHEGPDPNPGRYCFRLQKNRVYYVSESLV 60

Query: 248 KRATNIKRENLVALGTNIGKFTKSGKFHLTIQXXXXXXXXXKHKVWLKPTSEMSFLYGND 427
           KRATNI R  LV+LGT IGKFTK GKFHLT+Q         KHKVWLKPTSEMSFLYGN 
Sbjct: 61  KRATNIGRAQLVSLGTCIGKFTKGGKFHLTVQSVNLLAANAKHKVWLKPTSEMSFLYGNH 120

Query: 428 VVKGGLGRITDNINAYDGVVVFSMSDLPLGFGIAAKSTQDCRKMDPNGLVVIRQADTGEY 607
           V+KGGLGRIT+NI A DG+VVFSMSD+PLGFGIAAKSTQDCRK+DPNG+VV+ QAD GEY
Sbjct: 121 VLKGGLGRITENIVAGDGIVVFSMSDVPLGFGIAAKSTQDCRKLDPNGIVVLHQADIGEY 180

Query: 608 LRNQED 625
           LR +++
Sbjct: 181 LRMEDE 186


>ref|XP_002273010.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Vitis vinifera]
          Length = 187

 Score =  299 bits (765), Expect = 6e-79
 Identities = 146/186 (78%), Positives = 161/186 (86%)
 Frame = +2

Query: 68  MRPLDEAETTQVFEKLFKFTGNNLKNIVESPSHEGPDQNPGRYCFRLHKNRVYYVSESLV 247
           MRPLDE ETT VFEKLFKFTGNNLKNIVE+PS+EGPD N GRYCFRL KNRVYYVSES+V
Sbjct: 1   MRPLDENETTAVFEKLFKFTGNNLKNIVENPSYEGPDPNAGRYCFRLQKNRVYYVSESMV 60

Query: 248 KRATNIKRENLVALGTNIGKFTKSGKFHLTIQXXXXXXXXXKHKVWLKPTSEMSFLYGND 427
           KRATNI R  LV+LGT IGKFTK GKFHLT+Q         KHKVWLKPTSEMSFLYGN 
Sbjct: 61  KRATNIGRAQLVSLGTCIGKFTKGGKFHLTVQSVNLLAANAKHKVWLKPTSEMSFLYGNH 120

Query: 428 VVKGGLGRITDNINAYDGVVVFSMSDLPLGFGIAAKSTQDCRKMDPNGLVVIRQADTGEY 607
           V+KGGLGRIT+NI A DGVVVFSMSD+PLGFGIAAKSTQDCRK+DPNG+VV+ Q+D GEY
Sbjct: 121 VLKGGLGRITENIVAGDGVVVFSMSDVPLGFGIAAKSTQDCRKLDPNGIVVLHQSDIGEY 180

Query: 608 LRNQED 625
           LR +++
Sbjct: 181 LRMEDE 186


>ref|XP_004134205.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Cucumis sativus]
          Length = 187

 Score =  294 bits (752), Expect = 2e-77
 Identities = 141/186 (75%), Positives = 159/186 (85%)
 Frame = +2

Query: 68  MRPLDEAETTQVFEKLFKFTGNNLKNIVESPSHEGPDQNPGRYCFRLHKNRVYYVSESLV 247
           MRPLDE ETT VFEKL KFTGNNLKNIVE+PSHEG + NPGRYCFRLHKN+VYYVS+SLV
Sbjct: 1   MRPLDEQETTVVFEKLHKFTGNNLKNIVENPSHEGTEPNPGRYCFRLHKNKVYYVSDSLV 60

Query: 248 KRATNIKRENLVALGTNIGKFTKSGKFHLTIQXXXXXXXXXKHKVWLKPTSEMSFLYGND 427
           KRATN+ R NLV+LGT IGKFT  G FHLT+Q         KHKVWLKPTSEMSFLYGN 
Sbjct: 61  KRATNVARSNLVSLGTCIGKFTHGGSFHLTVQSLGLLSPNAKHKVWLKPTSEMSFLYGNH 120

Query: 428 VVKGGLGRITDNINAYDGVVVFSMSDLPLGFGIAAKSTQDCRKMDPNGLVVIRQADTGEY 607
           V+KGGLGRIT+NI   DGVVV+SMSD+PLGFGIAAKSTQDCRK+DPNG+VV+ Q+D GEY
Sbjct: 121 VLKGGLGRITENIVPGDGVVVYSMSDVPLGFGIAAKSTQDCRKLDPNGIVVLHQSDIGEY 180

Query: 608 LRNQED 625
           LR +++
Sbjct: 181 LRMEDE 186


>ref|XP_004159812.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Cucumis sativus]
          Length = 187

 Score =  293 bits (749), Expect = 4e-77
 Identities = 140/186 (75%), Positives = 159/186 (85%)
 Frame = +2

Query: 68  MRPLDEAETTQVFEKLFKFTGNNLKNIVESPSHEGPDQNPGRYCFRLHKNRVYYVSESLV 247
           MRPLDE ETT VFEKL KFTGNNLKNIV++PSHEG + NPGRYCFRLHKN+VYYVS+SLV
Sbjct: 1   MRPLDEQETTVVFEKLHKFTGNNLKNIVDNPSHEGTEPNPGRYCFRLHKNKVYYVSDSLV 60

Query: 248 KRATNIKRENLVALGTNIGKFTKSGKFHLTIQXXXXXXXXXKHKVWLKPTSEMSFLYGND 427
           KRATN+ R NLV+LGT IGKFT  G FHLT+Q         KHKVWLKPTSEMSFLYGN 
Sbjct: 61  KRATNVARSNLVSLGTCIGKFTHGGSFHLTVQSLGLLSPNAKHKVWLKPTSEMSFLYGNH 120

Query: 428 VVKGGLGRITDNINAYDGVVVFSMSDLPLGFGIAAKSTQDCRKMDPNGLVVIRQADTGEY 607
           V+KGGLGRIT+NI   DGVVV+SMSD+PLGFGIAAKSTQDCRK+DPNG+VV+ Q+D GEY
Sbjct: 121 VLKGGLGRITENIVPGDGVVVYSMSDVPLGFGIAAKSTQDCRKLDPNGIVVLHQSDIGEY 180

Query: 608 LRNQED 625
           LR +++
Sbjct: 181 LRMEDE 186


>ref|XP_002870210.1| At4g15770 [Arabidopsis lyrata subsp. lyrata]
           gi|297316046|gb|EFH46469.1| At4g15770 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 187

 Score =  288 bits (737), Expect = 1e-75
 Identities = 140/186 (75%), Positives = 156/186 (83%)
 Frame = +2

Query: 68  MRPLDEAETTQVFEKLFKFTGNNLKNIVESPSHEGPDQNPGRYCFRLHKNRVYYVSESLV 247
           MRPLDE ETT VFEKLFKF GNNLK IVE+PS EGP+  PG YCFRL KNRVYYVSE+LV
Sbjct: 1   MRPLDETETTVVFEKLFKFVGNNLKKIVENPSDEGPESTPGSYCFRLQKNRVYYVSEALV 60

Query: 248 KRATNIKRENLVALGTNIGKFTKSGKFHLTIQXXXXXXXXXKHKVWLKPTSEMSFLYGND 427
           KRATNI R+NLV+ GT IGK+T +G FHLTI          KHKVWLKPTSEMSFLYGN 
Sbjct: 61  KRATNISRKNLVSFGTCIGKYTHAGSFHLTIMSLNILAANAKHKVWLKPTSEMSFLYGNH 120

Query: 428 VVKGGLGRITDNINAYDGVVVFSMSDLPLGFGIAAKSTQDCRKMDPNGLVVIRQADTGEY 607
           V+KGGLGRITD+I   DGVVVFSMSD+PLGFGIAAKSTQDCRK+DPNG+VV+ QAD GEY
Sbjct: 121 VLKGGLGRITDSIVPGDGVVVFSMSDVPLGFGIAAKSTQDCRKLDPNGIVVLHQADIGEY 180

Query: 608 LRNQED 625
           LR+++D
Sbjct: 181 LRDEDD 186


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