BLASTX nr result

ID: Atractylodes21_contig00005640 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00005640
         (1577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17600.3| unnamed protein product [Vitis vinifera]              655   0.0  
ref|XP_002276037.1| PREDICTED: peptide chain release factor 2 [V...   655   0.0  
ref|XP_002514811.1| peptide chain release factor, putative [Rici...   645   0.0  
emb|CAG25777.1| putative translation releasing factor 2 [Cucumis...   637   e-180
ref|NP_851096.1| high chlorophyll fluorescent 109 protein [Arabi...   624   e-176

>emb|CBI17600.3| unnamed protein product [Vitis vinifera]
          Length = 451

 Score =  655 bits (1690), Expect = 0.0
 Identities = 337/418 (80%), Positives = 375/418 (89%), Gaps = 11/418 (2%)
 Frame = +3

Query: 192  PLSASVS------LPSPCHSKALFATP----DAGVSSETSV-WAMQEFYTLRKEVEATSL 338
            PLS+S+S       PS      LFA+P    D  V++ETS  WAMQ+FYTLR++VEA S 
Sbjct: 31   PLSSSLSHHHFLSAPSRFSPHVLFASPESQLDMEVTTETSSEWAMQDFYTLRRDVEAISE 90

Query: 339  RVEEIRASAGLEQLGEELAKLETAAANDSFWDDRTSAQQTLVALTDIKDKINLLNEFQAQ 518
            R EEIRASAGL+QL EELA LE  AA+ SFWDDR  AQ+TL+ALTD+KDKI LL +F+ Q
Sbjct: 91   RAEEIRASAGLQQLEEELAALEMKAADSSFWDDRAKAQETLLALTDVKDKIKLLTDFKTQ 150

Query: 519  VDDAETIVNLTEEMDSTDTALLEEAATIVKELNKALDKFELSQLLSGPYDKEGAVINITA 698
            V+DAETIV LTEEMDS DT LLEEAA I+KELNKALD+FEL+QLLSGPYDKEGAVI+ITA
Sbjct: 151  VEDAETIVKLTEEMDSIDTGLLEEAANIIKELNKALDRFELTQLLSGPYDKEGAVISITA 210

Query: 699  GAGGTDAQDWADMLLRMYVRWGERQRYKTRVVEKSMGEEAGIKSATIELEGRYAFGYLSG 878
            GAGGTDAQDWADMLLRMYVRWGE+QRYKTRVVEKSMGEEAGIKSATIELEGRYA+GYLSG
Sbjct: 211  GAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSMGEEAGIKSATIELEGRYAYGYLSG 270

Query: 879  EKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPEDSLNVEIPEEDLQIGFSRAGGSGGQN 1058
            EKGTHRIVRQSPFN+KGLRQTSFSGVEVMPLLPE+S++VEIPEEDL+I FSRAGG GGQN
Sbjct: 271  EKGTHRIVRQSPFNAKGLRQTSFSGVEVMPLLPEESMDVEIPEEDLEISFSRAGGKGGQN 330

Query: 1059 VNKVETAVRITHIPTGVTVRCTEERSQLSNKIKALSRLKAKLLVIAVEQRASEIKQIRGD 1238
            VNKVETAVRITHIPTGVTVRCTEERSQL+NKIKALSRLKAKLLVIA EQRASEIKQIRGD
Sbjct: 331  VNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGD 390

Query: 1239 AVKADWGQQIRNYVFHPYKLVKDVRTGYETTDIVSVMDGELDPFIKSYLRYKYSESMA 1412
            AVKA+WGQQIRNYVFHPYKLVKDVRTGYET+DI SVMDGEL+PFIK+YL++K+S +++
Sbjct: 391  AVKAEWGQQIRNYVFHPYKLVKDVRTGYETSDITSVMDGELEPFIKAYLKFKFSMTLS 448


>ref|XP_002276037.1| PREDICTED: peptide chain release factor 2 [Vitis vinifera]
          Length = 454

 Score =  655 bits (1690), Expect = 0.0
 Identities = 337/418 (80%), Positives = 375/418 (89%), Gaps = 11/418 (2%)
 Frame = +3

Query: 192  PLSASVS------LPSPCHSKALFATP----DAGVSSETSV-WAMQEFYTLRKEVEATSL 338
            PLS+S+S       PS      LFA+P    D  V++ETS  WAMQ+FYTLR++VEA S 
Sbjct: 34   PLSSSLSHHHFLSAPSRFSPHVLFASPESQLDMEVTTETSSEWAMQDFYTLRRDVEAISE 93

Query: 339  RVEEIRASAGLEQLGEELAKLETAAANDSFWDDRTSAQQTLVALTDIKDKINLLNEFQAQ 518
            R EEIRASAGL+QL EELA LE  AA+ SFWDDR  AQ+TL+ALTD+KDKI LL +F+ Q
Sbjct: 94   RAEEIRASAGLQQLEEELAALEMKAADSSFWDDRAKAQETLLALTDVKDKIKLLTDFKTQ 153

Query: 519  VDDAETIVNLTEEMDSTDTALLEEAATIVKELNKALDKFELSQLLSGPYDKEGAVINITA 698
            V+DAETIV LTEEMDS DT LLEEAA I+KELNKALD+FEL+QLLSGPYDKEGAVI+ITA
Sbjct: 154  VEDAETIVKLTEEMDSIDTGLLEEAANIIKELNKALDRFELTQLLSGPYDKEGAVISITA 213

Query: 699  GAGGTDAQDWADMLLRMYVRWGERQRYKTRVVEKSMGEEAGIKSATIELEGRYAFGYLSG 878
            GAGGTDAQDWADMLLRMYVRWGE+QRYKTRVVEKSMGEEAGIKSATIELEGRYA+GYLSG
Sbjct: 214  GAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSMGEEAGIKSATIELEGRYAYGYLSG 273

Query: 879  EKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPEDSLNVEIPEEDLQIGFSRAGGSGGQN 1058
            EKGTHRIVRQSPFN+KGLRQTSFSGVEVMPLLPE+S++VEIPEEDL+I FSRAGG GGQN
Sbjct: 274  EKGTHRIVRQSPFNAKGLRQTSFSGVEVMPLLPEESMDVEIPEEDLEISFSRAGGKGGQN 333

Query: 1059 VNKVETAVRITHIPTGVTVRCTEERSQLSNKIKALSRLKAKLLVIAVEQRASEIKQIRGD 1238
            VNKVETAVRITHIPTGVTVRCTEERSQL+NKIKALSRLKAKLLVIA EQRASEIKQIRGD
Sbjct: 334  VNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGD 393

Query: 1239 AVKADWGQQIRNYVFHPYKLVKDVRTGYETTDIVSVMDGELDPFIKSYLRYKYSESMA 1412
            AVKA+WGQQIRNYVFHPYKLVKDVRTGYET+DI SVMDGEL+PFIK+YL++K+S +++
Sbjct: 394  AVKAEWGQQIRNYVFHPYKLVKDVRTGYETSDITSVMDGELEPFIKAYLKFKFSMTLS 451


>ref|XP_002514811.1| peptide chain release factor, putative [Ricinus communis]
            gi|223545862|gb|EEF47365.1| peptide chain release factor,
            putative [Ricinus communis]
          Length = 458

 Score =  645 bits (1663), Expect = 0.0
 Identities = 323/411 (78%), Positives = 371/411 (90%), Gaps = 4/411 (0%)
 Frame = +3

Query: 195  LSASVSLPSPCHSKALFATPDA----GVSSETSVWAMQEFYTLRKEVEATSLRVEEIRAS 362
            L  S  LPS   S  ++A PD+    GV +ET  WAMQ+FY+LR++VEA S RVEEIR S
Sbjct: 50   LYTSSRLPS---SSVIYAAPDSQLNVGVDTETREWAMQDFYSLRRDVEAASERVEEIRTS 106

Query: 363  AGLEQLGEELAKLETAAANDSFWDDRTSAQQTLVALTDIKDKINLLNEFQAQVDDAETIV 542
            AGL+QL +E+  LE+ AAN SFWDDR +AQ+TL+ALTD+KDKI LL EF+ +V+DAETIV
Sbjct: 107  AGLQQLEQEVTNLESKAANTSFWDDRATAQETLLALTDVKDKIKLLTEFKTKVEDAETIV 166

Query: 543  NLTEEMDSTDTALLEEAATIVKELNKALDKFELSQLLSGPYDKEGAVINITAGAGGTDAQ 722
             LTEEMDS DT LLEEA++I+KELNK+L++FEL+QLLSGPYDKE AVI+ITAGAGGTDAQ
Sbjct: 167  KLTEEMDSIDTGLLEEASSIIKELNKSLERFELTQLLSGPYDKESAVISITAGAGGTDAQ 226

Query: 723  DWADMLLRMYVRWGERQRYKTRVVEKSMGEEAGIKSATIELEGRYAFGYLSGEKGTHRIV 902
            DWADMLLRMYVRWGE+QRYKTRVVEKS GEEAGIKSA IE+EGRYA+GYLSGEKGTHRIV
Sbjct: 227  DWADMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIKSAMIEVEGRYAYGYLSGEKGTHRIV 286

Query: 903  RQSPFNSKGLRQTSFSGVEVMPLLPEDSLNVEIPEEDLQIGFSRAGGSGGQNVNKVETAV 1082
            RQSPFN+KGLRQTSFSG+EVMPLLPE+S++VE+PEEDL+I FSRAGG GGQNVNKVETAV
Sbjct: 287  RQSPFNAKGLRQTSFSGIEVMPLLPEESMDVELPEEDLEISFSRAGGKGGQNVNKVETAV 346

Query: 1083 RITHIPTGVTVRCTEERSQLSNKIKALSRLKAKLLVIAVEQRASEIKQIRGDAVKADWGQ 1262
            RITHIPTGVTVRCTEERSQL+NKIKALSRLKAKLLVIAVEQRASEIKQIRGDAVKA+WGQ
Sbjct: 347  RITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAVEQRASEIKQIRGDAVKAEWGQ 406

Query: 1263 QIRNYVFHPYKLVKDVRTGYETTDIVSVMDGELDPFIKSYLRYKYSESMAN 1415
            QIRNYVFHPYKLVKDVRTGYET+D+ SVMDGEL+ FIK+YL+YKYS ++++
Sbjct: 407  QIRNYVFHPYKLVKDVRTGYETSDVTSVMDGELEAFIKAYLKYKYSMTLSS 457


>emb|CAG25777.1| putative translation releasing factor 2 [Cucumis sativus]
          Length = 453

 Score =  637 bits (1642), Expect = e-180
 Identities = 317/394 (80%), Positives = 361/394 (91%), Gaps = 4/394 (1%)
 Frame = +3

Query: 243  FATPDA----GVSSETSVWAMQEFYTLRKEVEATSLRVEEIRASAGLEQLGEELAKLETA 410
            FAT ++     + ++T  WA Q+FYTLRKEVE TS RVEEIR SAGL QL +ELA LE+ 
Sbjct: 57   FATHESPVGEAIDTDTREWATQDFYTLRKEVETTSERVEEIRNSAGLLQLDQELADLESK 116

Query: 411  AANDSFWDDRTSAQQTLVALTDIKDKINLLNEFQAQVDDAETIVNLTEEMDSTDTALLEE 590
            AA++SFWDDR+ AQ+ L+A+TD+KDKI +L +F+ QV++AETIV LTEEMDS D  LLEE
Sbjct: 117  AADNSFWDDRSKAQKVLMAMTDVKDKIKMLTDFKTQVEEAETIVKLTEEMDSVDVGLLEE 176

Query: 591  AATIVKELNKALDKFELSQLLSGPYDKEGAVINITAGAGGTDAQDWADMLLRMYVRWGER 770
            A  I+K+LNKALD+FELS+LLSGPYDKEGAVI+I+AGAGGTDAQDWADMLLRMYVRWGE+
Sbjct: 177  ATKIIKDLNKALDQFELSELLSGPYDKEGAVISISAGAGGTDAQDWADMLLRMYVRWGEK 236

Query: 771  QRYKTRVVEKSMGEEAGIKSATIELEGRYAFGYLSGEKGTHRIVRQSPFNSKGLRQTSFS 950
            QRYKTRVVEKS GEEAGIKSATIE+EGRYA+GY+SGEKGTHRIVRQSPFNSKGLRQTSFS
Sbjct: 237  QRYKTRVVEKSAGEEAGIKSATIEIEGRYAYGYISGEKGTHRIVRQSPFNSKGLRQTSFS 296

Query: 951  GVEVMPLLPEDSLNVEIPEEDLQIGFSRAGGSGGQNVNKVETAVRITHIPTGVTVRCTEE 1130
            GVEVMPLLP++S+NVE+PEEDL+I FSRAGG GGQNVNKVETAVRITHIPTGVTVRCTEE
Sbjct: 297  GVEVMPLLPDESMNVELPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEE 356

Query: 1131 RSQLSNKIKALSRLKAKLLVIAVEQRASEIKQIRGDAVKADWGQQIRNYVFHPYKLVKDV 1310
            RSQL+NKIKALSRLKAKLLVIA EQRASEIKQIRGDAVKA+WGQQIRNYVFHPYKLVKDV
Sbjct: 357  RSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDV 416

Query: 1311 RTGYETTDIVSVMDGELDPFIKSYLRYKYSESMA 1412
            RTGYET+DIVSVMDGEL+PFIK+YL+YKYS +++
Sbjct: 417  RTGYETSDIVSVMDGELEPFIKAYLKYKYSIALS 450


>ref|NP_851096.1| high chlorophyll fluorescent 109 protein [Arabidopsis thaliana]
            gi|8777302|dbj|BAA96892.1| translation releasing factor
            RF-2 [Arabidopsis thaliana] gi|15810391|gb|AAL07083.1|
            putative translation releasing factor RF-2 [Arabidopsis
            thaliana] gi|21436317|gb|AAM51328.1| putative translation
            releasing factor RF-2 [Arabidopsis thaliana]
            gi|21536944|gb|AAM61285.1| translation releasing factor
            RF-2 [Arabidopsis thaliana] gi|332006668|gb|AED94051.1|
            high chlorophyll fluorescent 109 protein [Arabidopsis
            thaliana]
          Length = 456

 Score =  624 bits (1609), Expect = e-176
 Identities = 316/438 (72%), Positives = 371/438 (84%), Gaps = 9/438 (2%)
 Frame = +3

Query: 129  SLCFAEKPTLAAAFPYSHSLFPLSASVSLP-----SPCHSKALFATPDAGVS----SETS 281
            S   A KP L    P +  L  LS  +SLP     S  +S  +FA  ++ +S    +ETS
Sbjct: 15   SFAIAGKPKLLLLRPTNLPLLRLSLPLSLPNFSSSSRFNSPIVFAAQESNLSVSNENETS 74

Query: 282  VWAMQEFYTLRKEVEATSLRVEEIRASAGLEQLGEELAKLETAAANDSFWDDRTSAQQTL 461
             W MQ+FYTLRK+VE  S RVEEIRASA L+QL +E+  LE+ A + SFWDDRT AQ+TL
Sbjct: 75   EWLMQDFYTLRKDVEIASARVEEIRASANLQQLEQEITNLESKATDTSFWDDRTKAQETL 134

Query: 462  VALTDIKDKINLLNEFQAQVDDAETIVNLTEEMDSTDTALLEEAATIVKELNKALDKFEL 641
             +L D+KD++ LL+EF+  V+DAETIV LTEEMDSTD +LLEEA  I+KELNK+LDKFEL
Sbjct: 135  SSLNDLKDRMRLLSEFKTMVEDAETIVKLTEEMDSTDVSLLEEAMGIIKELNKSLDKFEL 194

Query: 642  SQLLSGPYDKEGAVINITAGAGGTDAQDWADMLLRMYVRWGERQRYKTRVVEKSMGEEAG 821
            +QLLSGPYDKEGAV+ ITAGAGGTDAQDWADMLLRMY+RWGE+QRYKT+VVE S GEEAG
Sbjct: 195  TQLLSGPYDKEGAVVYITAGAGGTDAQDWADMLLRMYMRWGEKQRYKTKVVEMSNGEEAG 254

Query: 822  IKSATIELEGRYAFGYLSGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPEDSLNVEI 1001
            IKSAT+E+EGRYA+GY+SGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPE+++ +EI
Sbjct: 255  IKSATLEIEGRYAYGYISGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPEEAVGIEI 314

Query: 1002 PEEDLQIGFSRAGGSGGQNVNKVETAVRITHIPTGVTVRCTEERSQLSNKIKALSRLKAK 1181
            PEEDL I F+RAGG GGQNVNKVETAVRITHIPTGV VRCTEERSQL+NK +AL RLKAK
Sbjct: 315  PEEDLDISFTRAGGKGGQNVNKVETAVRITHIPTGVAVRCTEERSQLANKTRALIRLKAK 374

Query: 1182 LLVIAVEQRASEIKQIRGDAVKADWGQQIRNYVFHPYKLVKDVRTGYETTDIVSVMDGEL 1361
            L+VIA EQRA+EIK+IRGDAVKA+WGQQIRNYVFHPYKLVKDVRTG+ET+DI SVMDG+L
Sbjct: 375  LMVIAEEQRATEIKEIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDITSVMDGDL 434

Query: 1362 DPFIKSYLRYKYSESMAN 1415
            DPFIK+YL++KY+ +MA+
Sbjct: 435  DPFIKAYLKHKYTLAMAS 452


Top