BLASTX nr result

ID: Atractylodes21_contig00005604 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00005604
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329304.1| predicted protein [Populus trichocarpa] gi|2...    55   5e-06
ref|XP_002530813.1| conserved hypothetical protein [Ricinus comm...    55   8e-06
ref|XP_002539784.1| conserved hypothetical protein [Ricinus comm...    55   8e-06

>ref|XP_002329304.1| predicted protein [Populus trichocarpa] gi|222870758|gb|EEF07889.1|
           predicted protein [Populus trichocarpa]
          Length = 106

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 34/99 (34%), Positives = 49/99 (49%)
 Frame = -3

Query: 483 THTQTMDTQPSSFWKFDSPVVYLFGGIXXXXXXXXXXXXXXVCSLQRRRFANNHRDVEGG 304
           T++  +D     FW ++SPVVY F G+               CS ++   +++  D    
Sbjct: 5   TNSTAVDGTHGGFWHWNSPVVYFFVGLAFMLGLITVALIILACSYRKSLSSSSRSDA--- 61

Query: 303 GGSQKEARAVYNCGDGADVTPKIVVIMAGDEVPTYLAKP 187
            G +K A+   +     D+ PKI VIMAGDE PTYL KP
Sbjct: 62  -GDEKPAK---HEEIQVDLEPKIAVIMAGDENPTYLLKP 96


>ref|XP_002530813.1| conserved hypothetical protein [Ricinus communis]
           gi|223529634|gb|EEF31581.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 124

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 34/99 (34%), Positives = 47/99 (47%)
 Frame = -3

Query: 483 THTQTMDTQPSSFWKFDSPVVYLFGGIXXXXXXXXXXXXXXVCSLQRRRFANNHRDVEGG 304
           T   T     + FW + SP+ YLFGG+               CS ++   + ++   E G
Sbjct: 4   TSNSTTAAAAAGFWHWSSPIPYLFGGLALILGIIAVALIILACSYRK---SLSNESTEDG 60

Query: 303 GGSQKEARAVYNCGDGADVTPKIVVIMAGDEVPTYLAKP 187
              +  AR V    D  +  PKI VIMAGD+ PT+LAKP
Sbjct: 61  HEEKPGARQVEIMVDSDE--PKIAVIMAGDDNPTFLAKP 97


>ref|XP_002539784.1| conserved hypothetical protein [Ricinus communis]
           gi|223502421|gb|EEF22599.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 125

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 33/89 (37%), Positives = 44/89 (49%)
 Frame = -3

Query: 453 SSFWKFDSPVVYLFGGIXXXXXXXXXXXXXXVCSLQRRRFANNHRDVEGGGGSQKEARAV 274
           + FW + SP+ YLFGG+               CS ++  F  NH   +     +  A+ V
Sbjct: 16  AGFWHWSSPIPYLFGGLAVMLAFVTVSLIILACSYRKSLF--NHESRDDDHEDKTGAKKV 73

Query: 273 YNCGDGADVTPKIVVIMAGDEVPTYLAKP 187
               D  +  PKIVVIMAGD  PT+LAKP
Sbjct: 74  EVMVDSDE--PKIVVIMAGDNNPTFLAKP 100


Top