BLASTX nr result

ID: Atractylodes21_contig00005597 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00005597
         (1502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35964.3| unnamed protein product [Vitis vinifera]              292   1e-76
ref|XP_002521392.1| Heterogeneous nuclear ribonucleoprotein A1, ...   290   7e-76
ref|XP_002276110.2| PREDICTED: nucleolin-like [Vitis vinifera]        289   1e-75
ref|XP_003542073.1| PREDICTED: uncharacterized RNA-binding prote...   273   9e-71
gb|ACR34605.1| unknown [Zea mays] gi|413926095|gb|AFW66027.1| hy...   264   4e-68

>emb|CBI35964.3| unnamed protein product [Vitis vinifera]
          Length = 353

 Score =  292 bits (748), Expect = 1e-76
 Identities = 140/182 (76%), Positives = 169/182 (92%)
 Frame = +1

Query: 223 RDSSAGKLFVGGIAWETSEESFSNYFSNYGELTDSVIMMDKISGRPRGFGFVTFADPADA 402
           R+S +GKLFVGGI+WETSEE F+NYFSNYGE+TDSVIMMD+ +GRPRGFGF+TFADPA A
Sbjct: 46  RNSYSGKLFVGGISWETSEEIFTNYFSNYGEITDSVIMMDRHTGRPRGFGFITFADPAVA 105

Query: 403 DKVLEQDHVIDGRPVEVKRTVPREDMQVSRGVSRTKKIFVGGIPLTLTEDELREYFSNYG 582
           DKVLE+DHVIDGR VEVK+TVPRE M+V RGVS+T+KIFVGGIP +LTEDEL++YFS+YG
Sbjct: 106 DKVLEEDHVIDGRAVEVKKTVPREGMEV-RGVSKTRKIFVGGIPSSLTEDELKDYFSSYG 164

Query: 583 DIIEHQIMLDHVTGRSRGFGFVTFDSEEAVEKIFADGQLHELGGKQVEIKRAEPKRAGGD 762
            I+E+QIMLDHVTGRSRGFGFVTF SE+AVE++F++G+ HELGGK VEIK+AEPKRAG +
Sbjct: 165 AIVENQIMLDHVTGRSRGFGFVTFVSEDAVERLFSEGKTHELGGKLVEIKKAEPKRAGAE 224

Query: 763 FS 768
           ++
Sbjct: 225 YN 226


>ref|XP_002521392.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
           communis] gi|223539470|gb|EEF41060.1| Heterogeneous
           nuclear ribonucleoprotein A1, putative [Ricinus
           communis]
          Length = 412

 Score =  290 bits (742), Expect = 7e-76
 Identities = 148/231 (64%), Positives = 186/231 (80%), Gaps = 10/231 (4%)
 Frame = +1

Query: 103 NGDDEQLR--FDNANQNHEEYEDNVDDSGG--GNEIRHSINDN------SRDSSAGKLFV 252
           NG++E+    +D+  Q+ +++  N  + GG  GN  R S+  N      S DSS GKLFV
Sbjct: 24  NGEEEEEDDYYDDNQQHQQDHHQNQHELGGAGGNGRRQSLTFNQTRDNSSSDSSQGKLFV 83

Query: 253 GGIAWETSEESFSNYFSNYGELTDSVIMMDKISGRPRGFGFVTFADPADADKVLEQDHVI 432
           GGI+WET+EE+F++YFS +GE+TDSVIM D+ SGRPRGFGFVTFAD A AD+VLE+DH+I
Sbjct: 84  GGISWETTEETFTSYFSKFGEITDSVIMRDRHSGRPRGFGFVTFADLAAADRVLEEDHII 143

Query: 433 DGRPVEVKRTVPREDMQVSRGVSRTKKIFVGGIPLTLTEDELREYFSNYGDIIEHQIMLD 612
           D R VEVKRTVPRE+M+V +GV R +KIFVGGIP TLTEDEL EYFS YG+I+EHQIMLD
Sbjct: 144 DDRAVEVKRTVPREEMEV-KGVVRARKIFVGGIPPTLTEDELGEYFSVYGNIVEHQIMLD 202

Query: 613 HVTGRSRGFGFVTFDSEEAVEKIFADGQLHELGGKQVEIKRAEPKRAGGDF 765
           H TGRSRGFGFVTF++E++VE+IF+ G+ HELGGK+VEIK+A PKR GGD+
Sbjct: 203 HKTGRSRGFGFVTFETEDSVEQIFSTGRTHELGGKRVEIKKAVPKRNGGDY 253


>ref|XP_002276110.2| PREDICTED: nucleolin-like [Vitis vinifera]
          Length = 501

 Score =  289 bits (740), Expect = 1e-75
 Identities = 146/229 (63%), Positives = 181/229 (79%), Gaps = 4/229 (1%)
 Frame = +1

Query: 94  PFDNGDDEQLRFDNANQN----HEEYEDNVDDSGGGNEIRHSINDNSRDSSAGKLFVGGI 261
           P  +G+D+++      +      ++ E N DD   G            D    KLFVGGI
Sbjct: 157 PSKDGEDDEVSEKKEKKGTRGKRKQAEGNDDDDWMGES----------DEDKEKLFVGGI 206

Query: 262 AWETSEESFSNYFSNYGELTDSVIMMDKISGRPRGFGFVTFADPADADKVLEQDHVIDGR 441
           +WETSEE F+NYFSNYGE+TDSVIMMD+ +GRPRGFGF+TFADPA ADKVLE+DHVIDGR
Sbjct: 207 SWETSEEIFTNYFSNYGEITDSVIMMDRHTGRPRGFGFITFADPAVADKVLEEDHVIDGR 266

Query: 442 PVEVKRTVPREDMQVSRGVSRTKKIFVGGIPLTLTEDELREYFSNYGDIIEHQIMLDHVT 621
            VEVK+TVPRE M+V RGVS+T+KIFVGGIP +LTEDEL++YFS+YG I+E+QIMLDHVT
Sbjct: 267 AVEVKKTVPREGMEV-RGVSKTRKIFVGGIPSSLTEDELKDYFSSYGAIVENQIMLDHVT 325

Query: 622 GRSRGFGFVTFDSEEAVEKIFADGQLHELGGKQVEIKRAEPKRAGGDFS 768
           GRSRGFGFVTF SE+AVE++F++G+ HELGGK VEIK+AEPKRAG +++
Sbjct: 326 GRSRGFGFVTFVSEDAVERLFSEGKTHELGGKLVEIKKAEPKRAGAEYN 374


>ref|XP_003542073.1| PREDICTED: uncharacterized RNA-binding protein C660.15-like
           [Glycine max]
          Length = 353

 Score =  273 bits (698), Expect = 9e-71
 Identities = 135/183 (73%), Positives = 159/183 (86%)
 Frame = +1

Query: 217 NSRDSSAGKLFVGGIAWETSEESFSNYFSNYGELTDSVIMMDKISGRPRGFGFVTFADPA 396
           N RDS +GKLFVGGI+WETS+ESF NYFS YGE+TDSVIM +K+SGRPRGFGFVTFA+ A
Sbjct: 33  NRRDSFSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFANSA 92

Query: 397 DADKVLEQDHVIDGRPVEVKRTVPREDMQVSRGVSRTKKIFVGGIPLTLTEDELREYFSN 576
            AD+VL Q+H ID R VEVKRTVPRED+ V+ GV +TKKIFVGGI    T+DELREYFS 
Sbjct: 93  VADEVLAQEHTIDHRVVEVKRTVPREDVDVT-GVFKTKKIFVGGIAQFFTDDELREYFSP 151

Query: 577 YGDIIEHQIMLDHVTGRSRGFGFVTFDSEEAVEKIFADGQLHELGGKQVEIKRAEPKRAG 756
           YG++IE QIMLDH TGRSRGFGFVTFD E++VEK+F+ G++HE+GGKQVEIKRAEPKR+G
Sbjct: 152 YGNVIECQIMLDHNTGRSRGFGFVTFDDEDSVEKVFSVGKIHEIGGKQVEIKRAEPKRSG 211

Query: 757 GDF 765
            D+
Sbjct: 212 VDY 214


>gb|ACR34605.1| unknown [Zea mays] gi|413926095|gb|AFW66027.1| hypothetical protein
           ZEAMMB73_185087 [Zea mays]
          Length = 366

 Score =  264 bits (675), Expect = 4e-68
 Identities = 124/204 (60%), Positives = 165/204 (80%)
 Frame = +1

Query: 157 YEDNVDDSGGGNEIRHSINDNSRDSSAGKLFVGGIAWETSEESFSNYFSNYGELTDSVIM 336
           Y++ VD+  G     H      RD  +GK+FVGG+AWET+EESFS +F  YG +TDSVIM
Sbjct: 15  YDEEVDEEEG-----HPGRRVGRDGGSGKIFVGGVAWETTEESFSKHFEKYGAITDSVIM 69

Query: 337 MDKISGRPRGFGFVTFADPADADKVLEQDHVIDGRPVEVKRTVPREDMQVSRGVSRTKKI 516
            DK +  PRGFGFVTF+DP+  DKVLE DHVIDGR VEVKRTVPRE+M +++   +T+KI
Sbjct: 70  KDKHTKMPRGFGFVTFSDPSVIDKVLEDDHVIDGRTVEVKRTVPREEM-ITKDGPKTRKI 128

Query: 517 FVGGIPLTLTEDELREYFSNYGDIIEHQIMLDHVTGRSRGFGFVTFDSEEAVEKIFADGQ 696
           F+GG+P +LTEDEL+++FS+YG+++EHQIMLDH TGRSRGFGF+TF+SE++VE++ ++G+
Sbjct: 129 FIGGLPPSLTEDELKDHFSSYGNVVEHQIMLDHSTGRSRGFGFITFESEDSVERVISEGR 188

Query: 697 LHELGGKQVEIKRAEPKRAGGDFS 768
           + +LGGKQVEIK+AEPK+ G D S
Sbjct: 189 MRDLGGKQVEIKKAEPKKHGSDHS 212


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