BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00005580
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK16228.1|AF044396_1 ribulose-1,5-bisphosphate carboxylase s...   244   7e-63
gb|AAK16227.1|AF044395_1 ribulose-1,5-bisphosphate carboxylase s...   243   9e-63
sp|Q39746.1|RBS4_FLAPR RecName: Full=Ribulose bisphosphate carbo...   243   9e-63
gb|AAF19793.1|AF162210_1 ribulose-1,5-bisphosphate carboxylase/o...   243   1e-62
sp|Q40250.1|RBS_LACSA RecName: Full=Ribulose bisphosphate carbox...   243   1e-62

>gb|AAK16228.1|AF044396_1 ribulose-1,5-bisphosphate carboxylase small subunit R2 [Flaveria
           ramosissima]
          Length = 131

 Score =  244 bits (622), Expect = 7e-63
 Identities = 111/123 (90%), Positives = 118/123 (95%)
 Frame = +3

Query: 3   MKVWPPLGLKKYETLSYLPPLSDASLAKEVDYLLRNKWVPCLEFELEHGFVYRENHRSPG 182
           MKVWPPLG KKYETLSYLP L++A LAKEVDYLLRNKWVPCLEFELEHGFVYREN RSPG
Sbjct: 9   MKVWPPLGKKKYETLSYLPDLTEAQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPG 68

Query: 183 YYDGRYWTMWKLPMFGCTDSAQVLKELQECKKEYPKSFIRIIGFDNVRQVQCISFIASKP 362
           YYDGRYWTMWKLPMFGCTDSAQV+KELQECKKEYP+++IRIIGFDNVRQVQCISFIASKP
Sbjct: 69  YYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFIASKP 128

Query: 363 PGY 371
            G+
Sbjct: 129 DGF 131


>gb|AAK16227.1|AF044395_1 ribulose-1,5-bisphosphate carboxylase small subunit R1 [Flaveria
           ramosissima]
          Length = 131

 Score =  243 bits (621), Expect = 9e-63
 Identities = 110/123 (89%), Positives = 117/123 (95%)
 Frame = +3

Query: 3   MKVWPPLGLKKYETLSYLPPLSDASLAKEVDYLLRNKWVPCLEFELEHGFVYRENHRSPG 182
           MKVWPPLG KKYETLSYLP L++  LAKEVDYLLRNKWVPCLEFELEHGFVYRENHRSPG
Sbjct: 9   MKVWPPLGKKKYETLSYLPNLTETQLAKEVDYLLRNKWVPCLEFELEHGFVYRENHRSPG 68

Query: 183 YYDGRYWTMWKLPMFGCTDSAQVLKELQECKKEYPKSFIRIIGFDNVRQVQCISFIASKP 362
           YYDGRYWTMWKLPMFGCTDS+QV+KEL ECKKEYP+++IRIIGFDNVRQVQCISFIASKP
Sbjct: 69  YYDGRYWTMWKLPMFGCTDSSQVMKELGECKKEYPQAWIRIIGFDNVRQVQCISFIASKP 128

Query: 363 PGY 371
            GY
Sbjct: 129 DGY 131


>sp|Q39746.1|RBS4_FLAPR RecName: Full=Ribulose bisphosphate carboxylase small chain 4,
           chloroplastic; Short=RuBisCO small subunit 4; Flags:
           Precursor gi|967225|gb|AAB67848.1|
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit protein [Flaveria pringlei]
          Length = 178

 Score =  243 bits (621), Expect = 9e-63
 Identities = 111/123 (90%), Positives = 118/123 (95%)
 Frame = +3

Query: 3   MKVWPPLGLKKYETLSYLPPLSDASLAKEVDYLLRNKWVPCLEFELEHGFVYRENHRSPG 182
           MKVWPPLG KKYETLSYLP L++A LAKEVDYLLRNKWVPCLEFELEHGFVYREN RSPG
Sbjct: 56  MKVWPPLGKKKYETLSYLPNLTEAQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPG 115

Query: 183 YYDGRYWTMWKLPMFGCTDSAQVLKELQECKKEYPKSFIRIIGFDNVRQVQCISFIASKP 362
           YYDGRYWTMWKLPMFGCTDSAQV+KELQECKKEYP+++IRIIGFDNVRQVQCISFIASKP
Sbjct: 116 YYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFIASKP 175

Query: 363 PGY 371
            G+
Sbjct: 176 DGF 178


>gb|AAF19793.1|AF162210_1 ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Lactuca sativa]
          Length = 181

 Score =  243 bits (620), Expect = 1e-62
 Identities = 106/122 (86%), Positives = 117/122 (95%)
 Frame = +3

Query: 3   MKVWPPLGLKKYETLSYLPPLSDASLAKEVDYLLRNKWVPCLEFELEHGFVYRENHRSPG 182
           MKVWPP+GLKKYETLSYLPPLSD +L+KE+DYL+RNKWVPCLEFELEHGFVYRE+H SPG
Sbjct: 58  MKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWVPCLEFELEHGFVYREHHHSPG 117

Query: 183 YYDGRYWTMWKLPMFGCTDSAQVLKELQECKKEYPKSFIRIIGFDNVRQVQCISFIASKP 362
           YYDGRYWTMWKLPMFGCTDSAQV+KE+ ECKKEYP +FIR+IGFD+VRQVQCISFI SKP
Sbjct: 118 YYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDSVRQVQCISFIVSKP 177

Query: 363 PG 368
           PG
Sbjct: 178 PG 179


>sp|Q40250.1|RBS_LACSA RecName: Full=Ribulose bisphosphate carboxylase small chain,
           chloroplastic; Short=RuBisCO small subunit; Flags:
           Precursor gi|217946|dbj|BAA03103.1|
           riburose-1,5-bisphosphate carboxylase/oxygenase small
           subunit precursor [Lactuca sativa]
          Length = 181

 Score =  243 bits (620), Expect = 1e-62
 Identities = 104/122 (85%), Positives = 117/122 (95%)
 Frame = +3

Query: 3   MKVWPPLGLKKYETLSYLPPLSDASLAKEVDYLLRNKWVPCLEFELEHGFVYRENHRSPG 182
           MKVWPP+GLKKYETLSYLPPLSD +L+KE+DYL+RNKW+PCLEFELEHGFVYRE+H SPG
Sbjct: 58  MKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPG 117

Query: 183 YYDGRYWTMWKLPMFGCTDSAQVLKELQECKKEYPKSFIRIIGFDNVRQVQCISFIASKP 362
           YYDGRYWTMWKLPMFGCTDSAQV+KE+ ECKKEYP +FIR+IGFDN+RQVQCISFI +KP
Sbjct: 118 YYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDNIRQVQCISFIVAKP 177

Query: 363 PG 368
           PG
Sbjct: 178 PG 179