BLASTX nr result

ID: Atractylodes21_contig00005551 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00005551
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71833.1| hypothetical protein VITISV_005586 [Vitis vinifera]   116   2e-24
ref|XP_002284720.1| PREDICTED: HMG-Y-related protein A [Vitis vi...   115   3e-24
ref|XP_004145857.1| PREDICTED: HMG-Y-related protein A-like [Cuc...   110   9e-23
ref|XP_002302948.1| high mobility group family [Populus trichoca...   109   2e-22
ref|XP_002527784.1| Histone H1, putative [Ricinus communis] gi|2...   109   3e-22

>emb|CAN71833.1| hypothetical protein VITISV_005586 [Vitis vinifera]
          Length = 182

 Score =  116 bits (290), Expect = 2e-24
 Identities = 55/83 (66%), Positives = 72/83 (86%), Gaps = 3/83 (3%)
 Frame = +3

Query: 84  MATEQL---AAPPLSLPQYPELIFSAIEAMDEKNGANKSTISKHIEATYGNLPAAHSTLL 254
           MATE+      PP S+PQY E+I +AIEA+++K+G+NKS+ISK+IE+TYG+LPAAHSTLL
Sbjct: 1   MATEEPNNPPQPPSSIPQYSEMIMAAIEALNDKSGSNKSSISKYIESTYGDLPAAHSTLL 60

Query: 255 SHHLNKMKATGQLIMVKNNYVKP 323
           +HHLNKMK +G L+MVKNNY+KP
Sbjct: 61  AHHLNKMKQSGDLVMVKNNYMKP 83


>ref|XP_002284720.1| PREDICTED: HMG-Y-related protein A [Vitis vinifera]
           gi|297737664|emb|CBI26865.3| unnamed protein product
           [Vitis vinifera]
          Length = 182

 Score =  115 bits (289), Expect = 3e-24
 Identities = 55/83 (66%), Positives = 71/83 (85%), Gaps = 3/83 (3%)
 Frame = +3

Query: 84  MATEQL---AAPPLSLPQYPELIFSAIEAMDEKNGANKSTISKHIEATYGNLPAAHSTLL 254
           MATE+      PP S+PQY E+I +AIEA+++K G+NKS+ISK+IE+TYG+LPAAHSTLL
Sbjct: 1   MATEEPNNPPQPPSSIPQYSEMIMAAIEALNDKGGSNKSSISKYIESTYGDLPAAHSTLL 60

Query: 255 SHHLNKMKATGQLIMVKNNYVKP 323
           +HHLNKMK +G L+MVKNNY+KP
Sbjct: 61  AHHLNKMKQSGDLVMVKNNYMKP 83


>ref|XP_004145857.1| PREDICTED: HMG-Y-related protein A-like [Cucumis sativus]
           gi|449484561|ref|XP_004156916.1| PREDICTED:
           HMG-Y-related protein A-like [Cucumis sativus]
          Length = 180

 Score =  110 bits (276), Expect = 9e-23
 Identities = 52/79 (65%), Positives = 66/79 (83%)
 Frame = +3

Query: 84  MATEQLAAPPLSLPQYPELIFSAIEAMDEKNGANKSTISKHIEATYGNLPAAHSTLLSHH 263
           MAT+++  PP SLP YPE+IF AIEA++  NG+NKSTISK+IE+TYGNLP  HS+LL+HH
Sbjct: 1   MATQEVNKPP-SLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHH 59

Query: 264 LNKMKATGQLIMVKNNYVK 320
           LN MKA+G L+  KNNY+K
Sbjct: 60  LNMMKASGDLVFWKNNYMK 78


>ref|XP_002302948.1| high mobility group family [Populus trichocarpa]
           gi|222844674|gb|EEE82221.1| high mobility group family
           [Populus trichocarpa]
          Length = 190

 Score =  109 bits (273), Expect = 2e-22
 Identities = 51/80 (63%), Positives = 66/80 (82%)
 Frame = +3

Query: 84  MATEQLAAPPLSLPQYPELIFSAIEAMDEKNGANKSTISKHIEATYGNLPAAHSTLLSHH 263
           MA E++  PP SLP YPE+I SAIEA++E NG NK++ISK+IE+ YG+LPA H+ LLSHH
Sbjct: 1   MAAEEINKPP-SLPPYPEMILSAIEALNEANGCNKTSISKYIESKYGDLPAGHTALLSHH 59

Query: 264 LNKMKATGQLIMVKNNYVKP 323
           LN+MK TG+L+  KNNY+KP
Sbjct: 60  LNRMKDTGELVFWKNNYMKP 79


>ref|XP_002527784.1| Histone H1, putative [Ricinus communis] gi|223532819|gb|EEF34594.1|
           Histone H1, putative [Ricinus communis]
          Length = 199

 Score =  109 bits (272), Expect = 3e-22
 Identities = 48/77 (62%), Positives = 65/77 (84%)
 Frame = +3

Query: 93  EQLAAPPLSLPQYPELIFSAIEAMDEKNGANKSTISKHIEATYGNLPAAHSTLLSHHLNK 272
           +Q    P ++PQYPE+I +AIE++++KNG+NKS ISK +E TY +LP AH+TLLSHHLNK
Sbjct: 19  QQQQQQPSTIPQYPEMILAAIESLNDKNGSNKSAISKQMETTYPDLPPAHTTLLSHHLNK 78

Query: 273 MKATGQLIMVKNNYVKP 323
           MK +GQL++VKNNY+KP
Sbjct: 79  MKQSGQLVLVKNNYMKP 95


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