BLASTX nr result

ID: Atractylodes21_contig00005545 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00005545
         (903 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66843.1| hypothetical protein VITISV_002364 [Vitis vinifera]   291   1e-76
ref|XP_002268809.1| PREDICTED: uncharacterized WD repeat-contain...   291   1e-76
gb|ABF70017.1| WD-40 repeat family protein [Musa acuminata]           290   2e-76
ref|XP_002313076.1| predicted protein [Populus trichocarpa] gi|2...   290   4e-76
ref|XP_002519123.1| F-box and wd40 domain protein, putative [Ric...   287   2e-75

>emb|CAN66843.1| hypothetical protein VITISV_002364 [Vitis vinifera]
          Length = 511

 Score =  291 bits (746), Expect = 1e-76
 Identities = 150/264 (56%), Positives = 187/264 (70%), Gaps = 10/264 (3%)
 Frame = +3

Query: 141 KNSPQG----------RQKLGELFHTSEPNILIATADQQQDDAGTSSHHRHSLDSFPNSS 290
           ++SPQG          RQ  G L H++ P+   +     ++ A ++    H+ D+ P   
Sbjct: 54  RDSPQGKMLEESNSLERQTFGNLMHSAPPDDDFSF----RNSASSAPSPAHNGDASPYIG 109

Query: 291 PANYFMSPLNQAXXXXXXXXXXXXXNHHPATGLIGSLVREEGHVYSLASSGDLLYTGSDS 470
                 SP  ++             NH+P  GL+GSLVREEGH+YSLA+SGDLLYTGSDS
Sbjct: 110 TWEGASSPYTKSPWSSHVVPPSNG-NHYP-NGLMGSLVREEGHIYSLATSGDLLYTGSDS 167

Query: 471 KNIRVWKNFAEFSGFKSSSGLVKSIVVSGDRIFTGHQDGKIRVWKHLDSKNKKAHKRVGS 650
           KNIRVWKN  EFSGFKS+SGLVK+I++SG++IFTGHQDGKIRVWK + +KN   HKRVG+
Sbjct: 168 KNIRVWKNQKEFSGFKSNSGLVKAIIISGEKIFTGHQDGKIRVWK-VSAKNPSVHKRVGT 226

Query: 651 LPTTRDFIKSSMNPGNYVEVRRHRNVPWIKHFDVVACLSLDEENGLLYSGSWDKTLKVWR 830
           LPT RD+I+SSMNP NYVEVRRHRN  WIKHFD ++ LSL E+   LYS SWDKT+KVWR
Sbjct: 227 LPTFRDYIRSSMNPSNYVEVRRHRNALWIKHFDAISSLSLSEDKKFLYSASWDKTIKVWR 286

Query: 831 LSDSKCLESINAHDDAINSVVTGF 902
           +SDSKCLES+N HDDA+N+VV GF
Sbjct: 287 ISDSKCLESVNVHDDAVNAVVAGF 310


>ref|XP_002268809.1| PREDICTED: uncharacterized WD repeat-containing protein
           alr3466-like [Vitis vinifera]
          Length = 451

 Score =  291 bits (745), Expect = 1e-76
 Identities = 147/255 (57%), Positives = 185/255 (72%)
 Frame = +3

Query: 138 EKNSPQGRQKLGELFHTSEPNILIATADQQQDDAGTSSHHRHSLDSFPNSSPANYFMSPL 317
           E+++   RQ  G L H++ P+   +     ++ A ++    H+ D+ P         SP 
Sbjct: 3   EESNSLERQTFGNLMHSAPPDDDFSF----RNSASSAPSPAHNGDASPYIGTWEGASSPY 58

Query: 318 NQAXXXXXXXXXXXXXNHHPATGLIGSLVREEGHVYSLASSGDLLYTGSDSKNIRVWKNF 497
            ++             NH+P  GL+GSLVREEGH+YSLA+SGDLLYTGSDSKNIRVWKN 
Sbjct: 59  TKSPWSSHVVPPSNG-NHYP-NGLMGSLVREEGHIYSLATSGDLLYTGSDSKNIRVWKNQ 116

Query: 498 AEFSGFKSSSGLVKSIVVSGDRIFTGHQDGKIRVWKHLDSKNKKAHKRVGSLPTTRDFIK 677
            EFSGFKS+SGLVK+I++SG++IFTGHQDGKIRVWK + +KN   HKRVG+LPT RD+I+
Sbjct: 117 KEFSGFKSNSGLVKAIIISGEKIFTGHQDGKIRVWK-VSAKNPSVHKRVGTLPTFRDYIR 175

Query: 678 SSMNPGNYVEVRRHRNVPWIKHFDVVACLSLDEENGLLYSGSWDKTLKVWRLSDSKCLES 857
           SSMNP NYVEVRRHRN  WIKHFD ++ LSL E+   LYS SWDKT+KVWR+SDSKCLES
Sbjct: 176 SSMNPSNYVEVRRHRNALWIKHFDAISSLSLSEDKKFLYSASWDKTIKVWRISDSKCLES 235

Query: 858 INAHDDAINSVVTGF 902
           +N HDDA+N+VV GF
Sbjct: 236 VNVHDDAVNAVVAGF 250


>gb|ABF70017.1| WD-40 repeat family protein [Musa acuminata]
          Length = 465

 Score =  290 bits (743), Expect = 2e-76
 Identities = 136/175 (77%), Positives = 156/175 (89%)
 Frame = +3

Query: 378 ATGLIGSLVREEGHVYSLASSGDLLYTGSDSKNIRVWKNFAEFSGFKSSSGLVKSIVVSG 557
           ATGL+GSLVREEGHVYSLAS+GD+LYTGSDS+NIRVWK   E SGFKSSSGLVK+IVV+G
Sbjct: 67  ATGLVGSLVREEGHVYSLASAGDILYTGSDSRNIRVWKGRRELSGFKSSSGLVKAIVVAG 126

Query: 558 DRIFTGHQDGKIRVWKHLDSKNKKAHKRVGSLPTTRDFIKSSMNPGNYVEVRRHRNVPWI 737
           DRIFTGHQDGKIR+WK   SKN   H+RVG+LP  +D +KSS+NP NYVEVRRHRNV W+
Sbjct: 127 DRIFTGHQDGKIRIWK-TSSKNPAVHRRVGTLPRLKDLLKSSINPSNYVEVRRHRNVVWL 185

Query: 738 KHFDVVACLSLDEENGLLYSGSWDKTLKVWRLSDSKCLESINAHDDAINSVVTGF 902
           +HFD V+CLSLDEE G+LYSGSWDKT+KVWR+SDSKCLESI AHDDA+N+V TGF
Sbjct: 186 RHFDAVSCLSLDEEAGILYSGSWDKTVKVWRISDSKCLESIKAHDDAVNAVATGF 240


>ref|XP_002313076.1| predicted protein [Populus trichocarpa] gi|222849484|gb|EEE87031.1|
           predicted protein [Populus trichocarpa]
          Length = 424

 Score =  290 bits (741), Expect = 4e-76
 Identities = 154/255 (60%), Positives = 184/255 (72%), Gaps = 7/255 (2%)
 Frame = +3

Query: 159 RQKLGELFHTSEPNILI---ATADQQQDDAGTSSHH--RHSLDSFPNSSPANYFMSPLNQ 323
           R   G L H S+P          D    ++ TSS+   R+   S P S   + ++SP NQ
Sbjct: 9   RPTFGSLLH-SDPAFFSNQEEVDDSSNKNSPTSSNMSPRYYNGSTPPSGEGSPYLSPWNQ 67

Query: 324 AXXXXXXXXXXXXXNHHPAT--GLIGSLVREEGHVYSLASSGDLLYTGSDSKNIRVWKNF 497
                          +H  +  GL+GSL REEGHVYSLA+SGDLL+TGSDSKNIRVW N 
Sbjct: 68  PSPYTKSPWVIPSPVNHSFSKNGLVGSLAREEGHVYSLAASGDLLFTGSDSKNIRVWNNL 127

Query: 498 AEFSGFKSSSGLVKSIVVSGDRIFTGHQDGKIRVWKHLDSKNKKAHKRVGSLPTTRDFIK 677
            EF+GFKS+SGLVK+IV+ GD+IFTGHQDGKIRVW+   S+N  A+KRVG++PT +D++K
Sbjct: 128 KEFAGFKSNSGLVKAIVIHGDKIFTGHQDGKIRVWR-ASSRNPSAYKRVGTVPTLKDYVK 186

Query: 678 SSMNPGNYVEVRRHRNVPWIKHFDVVACLSLDEENGLLYSGSWDKTLKVWRLSDSKCLES 857
           SS+NP NYVEVRRHRNV  IKHFD V+CLSL+E+ GLLYSGSWDKTLKVWR SD KCLES
Sbjct: 187 SSVNPKNYVEVRRHRNVLRIKHFDAVSCLSLNEDQGLLYSGSWDKTLKVWRTSDYKCLES 246

Query: 858 INAHDDAINSVVTGF 902
           INAHDDAINSVVTGF
Sbjct: 247 INAHDDAINSVVTGF 261


>ref|XP_002519123.1| F-box and wd40 domain protein, putative [Ricinus communis]
           gi|223541786|gb|EEF43334.1| F-box and wd40 domain
           protein, putative [Ricinus communis]
          Length = 448

 Score =  287 bits (735), Expect = 2e-75
 Identities = 153/262 (58%), Positives = 182/262 (69%), Gaps = 7/262 (2%)
 Frame = +3

Query: 138 EKNSPQGRQKLGELFHTSEPNILIATADQQQDDAGTSSHHRHSLDSFPNSSPAN---YFM 308
           E+     R K G L H +EP I     D+     G+ +  R+S  S   S       Y M
Sbjct: 14  ERKGSLNRPKFGALLH-AEPAIFPKQEDENSSP-GSLASPRYSNSSTATSGEGEGSPYLM 71

Query: 309 SPL---NQAXXXXXXXXXXXXXNHHPAT-GLIGSLVREEGHVYSLASSGDLLYTGSDSKN 476
           SP                    NH+ +  GL+GS+VREEGHVYSLA+SG+LLYTGSDSKN
Sbjct: 72  SPSWSQPSPYTKSPWLIPSPIVNHNLSNHGLVGSIVREEGHVYSLAASGELLYTGSDSKN 131

Query: 477 IRVWKNFAEFSGFKSSSGLVKSIVVSGDRIFTGHQDGKIRVWKHLDSKNKKAHKRVGSLP 656
           IRVW+N  EFSGFKS+SGLVK+IV+ GDRIFTGH+DGKIR+WK + +KN   HKR+G LP
Sbjct: 132 IRVWRNMKEFSGFKSNSGLVKAIVILGDRIFTGHRDGKIRIWK-ISAKNPSVHKRIGGLP 190

Query: 657 TTRDFIKSSMNPGNYVEVRRHRNVPWIKHFDVVACLSLDEENGLLYSGSWDKTLKVWRLS 836
           T RD+I  S+NP NYVEVRRHRNV  IKHFD V+CLSL++E GLLYSGSWDKTLK+WR+S
Sbjct: 191 TFRDYITKSVNPKNYVEVRRHRNVLRIKHFDAVSCLSLNQEQGLLYSGSWDKTLKIWRIS 250

Query: 837 DSKCLESINAHDDAINSVVTGF 902
           D KCLESINAH+DAINSV  GF
Sbjct: 251 DYKCLESINAHEDAINSVAVGF 272


Top