BLASTX nr result

ID: Atractylodes21_contig00005512 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00005512
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329162.1| tir-nbs-lrr resistance protein [Populus tric...    72   4e-11
ref|XP_002336335.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
gb|AFP55552.1| TIR-NBS-LRR [Rosa rugosa]                               70   1e-10
ref|XP_002264004.2| PREDICTED: TMV resistance protein N-like [Vi...    70   1e-10
gb|AEE43931.1| TIR-NBS-LRR resistance protein muRdr1G [Rosa mult...    70   1e-10

>ref|XP_002329162.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222870943|gb|EEF08074.1| tir-nbs-lrr resistance
            protein [Populus trichocarpa]
          Length = 1203

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 51/114 (44%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
 Frame = -1

Query: 332  SVFSRNNLQKLSIVQDERIQSRCMTTISQR---SCSPSKMKHPQSLVMSSLAGFNSLREL 162
            S+FS  NL+ LS        SR  T I QR      P K  +  SLV+ SL+G +SL  L
Sbjct: 826  SIFSLKNLKILSFHGCAE-SSRSTTNIWQRLMFPLMPGKRANSTSLVLPSLSGLSSLTRL 884

Query: 161  NFSNCNIFE--VPDSIGGFSCLESLYLHGNNFTSLPGCLSQLSRLQNLVLSDCK 6
              SNCN+ E  VP+ IG  S L  L L  N F SLP  + QLS LQ L + DCK
Sbjct: 885  GLSNCNLGEGAVPNDIGYLSSLRQLNLSRNKFVSLPTSIDQLSGLQFLRMEDCK 938


>ref|XP_002336335.1| predicted protein [Populus trichocarpa] gi|222834747|gb|EEE73210.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 50/114 (43%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
 Frame = -1

Query: 332 SVFSRNNLQKLSIVQDERIQSRCMTTISQR---SCSPSKMKHPQSLVMSSLAGFNSLREL 162
           S+FS  NL+ LS        SR  T I QR      P K  +  SLV+ SL+G +SL  L
Sbjct: 153 SIFSLKNLKILSFHGCAE-SSRSTTNIWQRLMFPLMPGKRANSTSLVLPSLSGLSSLTRL 211

Query: 161 NFSNCNIFE--VPDSIGGFSCLESLYLHGNNFTSLPGCLSQLSRLQNLVLSDCK 6
             SNCN+ E  VP+ IG  S L  L L  N F SLP  + QLS L+ L + DCK
Sbjct: 212 GLSNCNLGEGAVPNDIGYLSSLRQLNLSRNKFVSLPTSIDQLSGLKFLYMEDCK 265


>gb|AFP55552.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1144

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/79 (44%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
 Frame = -1

Query: 233  PSKMKHPQSLVMSSLAGFNSLRELNFSNCNIFE--VPDSIGGFSCLESLYLHGNNFTSLP 60
            P K  HP   +++SL  F+SL EL  ++CN+FE  +P+ IG  S L SL L GNNF SLP
Sbjct: 780  PRKSPHPLIPLLASLKHFSSLTELKLNDCNLFEGDIPNDIGSLSSLRSLGLRGNNFVSLP 839

Query: 59   GCLSQLSRLQNLVLSDCKK 3
              +  LS+L+ + + +CK+
Sbjct: 840  ASIHLLSKLEYINVENCKR 858


>ref|XP_002264004.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1092

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 44/116 (37%), Positives = 66/116 (56%), Gaps = 2/116 (1%)
 Frame = -1

Query: 347  KKLLSSVFSRNNLQKLSIVQDERIQSRCMTTISQRSCSPSKMKHPQSLVMSSLAGFNSLR 168
            K++ SS+    NL+ LS+   +   S+    IS RS   + ++ P       L+G  SL+
Sbjct: 729  KEVTSSINLLTNLEALSLAGCKGGGSKSRNLISFRSSPAAPLQLP------FLSGLYSLK 782

Query: 167  ELNFSNCNIFE--VPDSIGGFSCLESLYLHGNNFTSLPGCLSQLSRLQNLVLSDCK 6
             LN S+CN+ E  +P  +   S LE+LYL  N+F +LP  LS+LSRL++L L  CK
Sbjct: 783  SLNLSDCNLLEGALPSDLSSLSSLENLYLDKNSFITLPASLSRLSRLRSLTLEHCK 838


>gb|AEE43931.1| TIR-NBS-LRR resistance protein muRdr1G [Rosa multiflora]
          Length = 1141

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 36/79 (45%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
 Frame = -1

Query: 233  PSKMKHPQSLVMSSLAGFNSLRELNFSNCNIFE--VPDSIGGFSCLESLYLHGNNFTSLP 60
            P K  HP   V++SL  F+SL+ELN ++CN+ E  +P+ IG  S LE L L GNNF SLP
Sbjct: 774  PRKSHHPLIPVLASLKHFSSLKELNLNDCNLCEGEIPNDIGSLSSLECLELGGNNFVSLP 833

Query: 59   GCLSQLSRLQNLVLSDCKK 3
              +  L RL ++ + +CK+
Sbjct: 834  ASIHLLCRLGSINVENCKR 852


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