BLASTX nr result

ID: Atractylodes21_contig00005504 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00005504
         (1250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_175213.1| putative F-box protein [Arabidopsis thaliana] g...   117   1e-30
emb|CAN60954.1| hypothetical protein VITISV_008876 [Vitis vinifera]   137   6e-30
ref|XP_002887926.1| hypothetical protein ARALYDRAFT_315031 [Arab...   112   3e-28
ref|NP_174365.1| F-box domain-containing protein [Arabidopsis th...   122   6e-28
gb|AAD32931.1|AC004135_6 T17H7.6 [Arabidopsis thaliana]               122   1e-27

>ref|NP_175213.1| putative F-box protein [Arabidopsis thaliana]
           gi|75263267|sp|Q9FZF8.1|FB44_ARATH RecName:
           Full=Putative F-box protein At1g47790
           gi|9802587|gb|AAF99789.1|AC012463_6 T2E6.11 [Arabidopsis
           thaliana] gi|332194093|gb|AEE32214.1| putative F-box
           protein [Arabidopsis thaliana]
          Length = 389

 Score =  117 bits (292), Expect(2) = 1e-30
 Identities = 92/300 (30%), Positives = 144/300 (48%), Gaps = 11/300 (3%)
 Frame = +2

Query: 32  PHELVSEILTRLPVKSLTRFRSVSTRWNSTITHPSFSKSHFSRSAAAAGASLTLILSFIN 211
           P +L SEIL RLPVKS+ RFR VS  W+S IT P F K++ ++S+           S + 
Sbjct: 26  PLDLASEILLRLPVKSVVRFRCVSKLWSSIITDPYFIKTYETQSSTRQ--------SLLF 77

Query: 212 RFNCQRTIFSVTIPP---DQTRSLPNPTD---VLIIPGFAHPFVSQSLNGLICFN-LGAM 370
            F     +F  +IP    D   S     D   V +   F++P  ++S++GLICF+ L  +
Sbjct: 78  CFKQSDKLFVFSIPKHHYDSNSSSQAAIDRFQVKLPQEFSYPSPTESVHGLICFHVLATV 137

Query: 371 CVCNPSTRKFVKLPWTQTETPSPSPASTRHRTDAFGFDPVSSAHKVLDTWITCHENEIMM 550
            V NPS R+F+ LP  +         S +  T   G+DP+   HKV    +    N    
Sbjct: 138 IVWNPSMRQFLTLPKPR--------KSWKELTVFLGYDPIEGKHKV----VCLPRNRTCD 185

Query: 551 EHSVFTVGSGSNKWRRIADGPPYFPFNDNERICINGHIYFRAFPSMVASEKAVMVAFDVN 730
           E  V T+GS    WR +     +   ND    CI G +Y+ A+  +  +    +++F V 
Sbjct: 186 ECQVLTLGSAQKSWRTVKTKHKHRSTNDTWGRCIKGVVYYIAY--VYHTRVWCIMSFHVK 243

Query: 731 REEFRFIEMRDDTISQSEDAVLMEQGGHLAIVDH----QDNVLVMWVLMEEEGEKWVKKR 898
            E+F  I++  + I +    V++   G LA VD      ++ + +W+L + E  KW  K+
Sbjct: 244 SEKFDMIKLPLENIYRD---VMINYEGRLACVDKLYTLNNDGIRLWILEDAEKHKWSSKQ 300



 Score = 43.9 bits (102), Expect(2) = 1e-30
 Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
 Frame = +3

Query: 1002 TFSGEMIYAERSLVKPFYVFLYDIKKNEGRKVEICGLTDSEFSYSD--------VVMNVN 1157
            T +GE +Y     +K F +F  D KKN  RKVE  G+ D EF  S+         + N  
Sbjct: 322  THAGEFVYISTQYLKSFVLFC-DPKKNRFRKVEFNGIVDEEFRLSNGVGRGRIYALYNFP 380

Query: 1158 EHVESIMSL 1184
             H ES+MSL
Sbjct: 381  NHCESLMSL 389


>emb|CAN60954.1| hypothetical protein VITISV_008876 [Vitis vinifera]
          Length = 862

 Score =  137 bits (345), Expect = 6e-30
 Identities = 109/321 (33%), Positives = 156/321 (48%), Gaps = 24/321 (7%)
 Frame = +2

Query: 20   PEPIPHELVSEILTRLPVKSLTRFRSVSTRWNSTITHPSFSKSHFSRSAAAAGASLTLIL 199
            P  IP ELV EILT +PVKSL + R V  RW S I+ PSF ++H SRSA       TL++
Sbjct: 478  PVSIPDELVFEILTYIPVKSLLQCRGVCKRWRSMISDPSFIEAHRSRSAT------TLLI 531

Query: 200  SFINRFNCQRTIFSVTIPPDQTRSLPNPTDVLIIPGFAHPFVSQSLNGLICFN------- 358
            SF +    +R     +I   + R L          G  H   SQS+NGLIC         
Sbjct: 532  SFPDTHRPRRKHHLFSIRDGEARQL---------SGSRHWNTSQSVNGLICLYEQHDRSF 582

Query: 359  ---LGAMCVCNPSTRKFVKLPWTQTETPSPSPASTRHRTDAFGFDPVSSAHKVLDTWITC 529
                  + +CNPSTR+ V LP T+   P        H+  + GFDP +  +K+L  W   
Sbjct: 583  PKLSFRVTLCNPSTRERVTLPPTRFSNPD---LCFDHQHISLGFDPSTKTYKILKVWFE- 638

Query: 530  HENEIMMEHSVFTVGSGSNKWRRIADGPPYFPFNDNERICINGHIYF-------RAFPSM 688
              N IM E  + T+  G   WR I DG  Y    + + IC+NG IY+         +P  
Sbjct: 639  RFNSIMCE--ILTL--GXRAWRIIKDGLEY--TLEAKGICLNGTIYWADARHISEDYPHF 692

Query: 689  VASEKAVMVAFDVNREEFRFIEMRDDT-ISQSEDAVLMEQGGHLAIVDHQ------DNVL 847
            V  +  V +AFDV  E+FR + +  +  I     + +++ GGH+AI D+Q        V+
Sbjct: 693  VVMQNRV-IAFDVGEEKFRSVPVPPEVPIWDKCMSSIIQIGGHMAIADYQHVATGISTVM 751

Query: 848  VMWVLMEEEGEKWVKKRVEIP 910
            ++W L +     W +KR+ +P
Sbjct: 752  LIWKLEDSVNGIWSQKRILLP 772


>ref|XP_002887926.1| hypothetical protein ARALYDRAFT_315031 [Arabidopsis lyrata subsp.
           lyrata] gi|297333767|gb|EFH64185.1| hypothetical protein
           ARALYDRAFT_315031 [Arabidopsis lyrata subsp. lyrata]
          Length = 386

 Score =  112 bits (280), Expect(2) = 3e-28
 Identities = 93/303 (30%), Positives = 142/303 (46%), Gaps = 10/303 (3%)
 Frame = +2

Query: 32  PHELVSEILTRLPVKSLTRFRSVSTRWNSTITHPSFSKSHFSRSAAAAGASLTLILSFIN 211
           P +L SEIL +LP KS+ R R +S  W+S  T P F KS  +RS      S   +L F  
Sbjct: 30  PLDLASEILLKLPAKSIVRSRCISKLWSSITTDPYFIKSFETRS-----LSKPSLLLFFK 84

Query: 212 RFNCQRTIFSVTIPPDQTR------SLPNPTDV--LIIPGFAHPFVSQSLNGLICF-NLG 364
           R + +  +FS       +       S P P D+  +  P +      +S++GLICF  L 
Sbjct: 85  RMD-KLCVFSFPQHHQNSNERYGNDSSPQPLDIYQMKCPKYFCFSFMESVHGLICFRKLA 143

Query: 365 AMCVCNPSTRKFVKLPWTQTETPSPSPASTRHRTDAFGFDPVSSAHKVLDTWITCHENEI 544
              + NP+ R+F+ L           P  T     + G+DP+   HKV    +    ++I
Sbjct: 144 TPIIWNPTMRQFLTL---------TKPDKTWR---SIGYDPIEGKHKV----VCLPGDKI 187

Query: 545 MMEHSVFTVGSGSNKWRRIADGPPYFPFNDNERICINGHIYFRA-FPSMVASEKAVMVAF 721
             +  V T+GSG  +WR I     + P+ D+   CING +Y++A   ++    +AV+++F
Sbjct: 188 WEDCRVLTLGSGQEQWRSIKTSLDHHPYTDSYGRCINGVLYYKAGIDNLSGQSQAVIMSF 247

Query: 722 DVNREEFRFIEMRDDTISQSEDAVLMEQGGHLAIVDHQDNVLVMWVLMEEEGEKWVKKRV 901
           DV  E+F  I +  DTI      +L+   G LA+V H D         + E  KW  K  
Sbjct: 248 DVRSEKFHAITLPVDTIR----GLLIAYEGRLALV-HSD--------YDAEKHKWSDKSF 294

Query: 902 EIP 910
            +P
Sbjct: 295 PVP 297



 Score = 40.4 bits (93), Expect(2) = 3e-28
 Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
 Frame = +3

Query: 1002 TFSGEMIYAERSLVKPFYVFLYDIKKNEGRKVEICGLTDSEFSYSD--------VVMNVN 1157
            T +GE IY   + ++ FY+  YD K+N  R VE  G+ D EF +           +    
Sbjct: 315  TDAGEFIYLPSTFLRSFYIKYYDPKRNSFRTVEFKGVADREFRHKSGLGNRRVYALQTFP 374

Query: 1158 EHVESIMSL 1184
             H+++++SL
Sbjct: 375  NHMDNLISL 383


>ref|NP_174365.1| F-box domain-containing protein [Arabidopsis thaliana]
           gi|142989205|sp|Q9SY20.2|FB20_ARATH RecName: Full=F-box
           protein At1g30790 gi|332193151|gb|AEE31272.1| F-box
           domain-containing protein [Arabidopsis thaliana]
          Length = 399

 Score =  122 bits (306), Expect(2) = 6e-28
 Identities = 106/314 (33%), Positives = 152/314 (48%), Gaps = 20/314 (6%)
 Frame = +2

Query: 29  IPHELVSEILTRLPVKSLTRFRSVSTRWNSTITHPSFSKSHFSRSAAAAGASLTLILSFI 208
           IP +L  EILTRLP KSL +F+ VS  W+S I + SF  S +S S+         I++F 
Sbjct: 9   IPFDLTVEILTRLPAKSLMKFKCVSKLWSSIIHNQSFIDSFYSISSTRP----RFIVAFS 64

Query: 209 N-RFNCQRT----IFSVTIPPDQTRSLPNPTDVLIIPGF--AHPFVSQ--SLNGLI-CFN 358
           N  F   +     IFS +    ++ S         IP    ++   S+  S+NG I C  
Sbjct: 65  NGSFPSDKEKRLFIFSSSHEGHESSSSVITNLDTTIPSLTVSNNLASRCISVNGFIACSL 124

Query: 359 LGAMCVCNPSTRKFVKLPWTQTETPSPSPASTRHRTDAFGFDPVSSAHKVLDTWITCHEN 538
                +CNPSTR+ + LP        PS  +   R+   G+DPV    K L    +C  N
Sbjct: 125 YTRFTICNPSTRQVIVLPIL------PSGRAPDMRSTCIGYDPVDDQFKALALISSCIPN 178

Query: 539 -EIMMEHSVFTV-GSGSN-KWRRIADG---PPYFPFNDNERICINGHIYFRAFPSMVASE 700
            +  +EH V T+ G   N  WR+I      PPY P     R+CING +Y+ A+     S 
Sbjct: 179 KDSTVEHLVLTLKGDKKNYSWRQIQGNNNIPPYSPV--TMRVCINGVVYYGAWTPR-QSM 235

Query: 701 KAVMVAFDVNREEFRFIEMRDDTISQSEDAVLMEQGGHLAIVDH----QDNVLVMWVLME 868
            AV+V FDV  E+  FI+   D +    D++LME  G LA +      + +   +WVL +
Sbjct: 236 NAVIVCFDVRSEKITFIKTPKDVVRWCNDSILMEYKGKLASIVRNRYSRFDTFDLWVLED 295

Query: 869 EEGEKWVKKRVEIP 910
            E ++W K+  EIP
Sbjct: 296 IEKQEWSKQTCEIP 309



 Score = 29.3 bits (64), Expect(2) = 6e-28
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 12/70 (17%)
 Frame = +3

Query: 1011 GEMIYAERSL----VKPFYVFLYDIKKNEGRKVEICGLTDSE-----FSYSDVVMNV--- 1154
            GE+I A   L    ++ FY+F Y ++  + R+V + G+ D E     +       NV   
Sbjct: 330  GEIILAPTCLSGYHLRSFYIFYYHVETKKIRRVRLEGIADDENFRRCYGIGSGQCNVFIS 389

Query: 1155 NEHVESIMSL 1184
             EHVE+I  L
Sbjct: 390  PEHVETIRFL 399


>gb|AAD32931.1|AC004135_6 T17H7.6 [Arabidopsis thaliana]
          Length = 502

 Score =  122 bits (306), Expect(2) = 1e-27
 Identities = 106/314 (33%), Positives = 152/314 (48%), Gaps = 20/314 (6%)
 Frame = +2

Query: 29  IPHELVSEILTRLPVKSLTRFRSVSTRWNSTITHPSFSKSHFSRSAAAAGASLTLILSFI 208
           IP +L  EILTRLP KSL +F+ VS  W+S I + SF  S +S S+         I++F 
Sbjct: 9   IPFDLTVEILTRLPAKSLMKFKCVSKLWSSIIHNQSFIDSFYSISSTRP----RFIVAFS 64

Query: 209 N-RFNCQRT----IFSVTIPPDQTRSLPNPTDVLIIPGF--AHPFVSQ--SLNGLI-CFN 358
           N  F   +     IFS +    ++ S         IP    ++   S+  S+NG I C  
Sbjct: 65  NGSFPSDKEKRLFIFSSSHEGHESSSSVITNLDTTIPSLTVSNNLASRCISVNGFIACSL 124

Query: 359 LGAMCVCNPSTRKFVKLPWTQTETPSPSPASTRHRTDAFGFDPVSSAHKVLDTWITCHEN 538
                +CNPSTR+ + LP        PS  +   R+   G+DPV    K L    +C  N
Sbjct: 125 YTRFTICNPSTRQVIVLPIL------PSGRAPDMRSTCIGYDPVDDQFKALALISSCIPN 178

Query: 539 -EIMMEHSVFTV-GSGSN-KWRRIADG---PPYFPFNDNERICINGHIYFRAFPSMVASE 700
            +  +EH V T+ G   N  WR+I      PPY P     R+CING +Y+ A+     S 
Sbjct: 179 KDSTVEHLVLTLKGDKKNYSWRQIQGNNNIPPYSPV--TMRVCINGVVYYGAWTPR-QSM 235

Query: 701 KAVMVAFDVNREEFRFIEMRDDTISQSEDAVLMEQGGHLAIVDH----QDNVLVMWVLME 868
            AV+V FDV  E+  FI+   D +    D++LME  G LA +      + +   +WVL +
Sbjct: 236 NAVIVCFDVRSEKITFIKTPKDVVRWCNDSILMEYKGKLASIVRNRYSRFDTFDLWVLED 295

Query: 869 EEGEKWVKKRVEIP 910
            E ++W K+  EIP
Sbjct: 296 IEKQEWSKQTCEIP 309



 Score = 28.5 bits (62), Expect(2) = 1e-27
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
 Frame = +3

Query: 1011 GEMIYAERSL----VKPFYVFLYDIKKNEGRKVEICGLTDSE 1124
            GE+I A   L    ++ FY+F Y ++  + R+V + G+ D E
Sbjct: 330  GEIILAPTCLSGYHLRSFYIFYYHVETKKIRRVRLEGIADDE 371


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