BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00005358
         (2982 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containi...  1117   0.0  
ref|XP_002515260.1| pentatricopeptide repeat-containing protein,...  1069   0.0  
ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containi...  1039   0.0  
ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containi...  1037   0.0  
ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thalia...   991   0.0  

>ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
            chloroplastic [Vitis vinifera]
          Length = 867

 Score = 1117 bits (2890), Expect = 0.0
 Identities = 572/845 (67%), Positives = 669/845 (79%), Gaps = 9/845 (1%)
 Frame = +2

Query: 164  THNGHNPRH-PSPKVSLHPPTPRNPTANKSPVPATVAPGGSSSLHHRNPNFTPLSASKSE 340
            T N HN  H  S KVSL  P P    A K   P   +P  +++ +   P+ +PL  SKSE
Sbjct: 27   TKNHHNNHHWSSHKVSLTNPLPSPRNAAK---PGAASPATATNRNSNFPSLSPLPPSKSE 83

Query: 341  LAADFSGRRSTRFVSKMHFGRPKAAGSSRHSVVAEDALQQLIRCSGDDRLVESVLLGFQS 520
            L ADFSGRRSTRFVSKMHFGRPK A ++RH+  AE+AL+  IR + DD+ ++SVLL F+S
Sbjct: 84   LTADFSGRRSTRFVSKMHFGRPKTAAAARHTSTAEEALRHAIRFASDDKGIDSVLLNFES 143

Query: 521  KLCGSDDYNFLFRELGNRNEWSMAIQCFEFAVSRERRRTEQGKLASSVISVLGRLGKVDL 700
            +LCGSDDY FL RELGNR EW+ AI+CFEFAV RE+RR EQGKLAS++IS+LGRLG+V+L
Sbjct: 144  RLCGSDDYTFLLRELGNRGEWAKAIRCFEFAVRREQRRNEQGKLASAMISILGRLGQVEL 203

Query: 701  AKKVFETAVSEGYGNTVYAYSALISAYAKSGLCDEAIKVFETMKLSGLKPNLVTYNALID 880
            AK VFETA++EGYGNTVYA+SALISAY +SG CDEAIKVFETMK SGLKPNLVTYNA+ID
Sbjct: 204  AKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSGLKPNLVTYNAVID 263

Query: 881  ACGKGGADFKRASEIFDDMLSNGFQPDRITFNSLLAVCSGAGLWETALNLFNEMSYRGID 1060
            ACGKGG DF RA+EIFD+ML NG QPDRITFNSLLAVC   GLWE A NLF+EM YRGI+
Sbjct: 264  ACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGIE 323

Query: 1061 PDIYTYNTLLDVASSGGHMDSAFQIMAEMPTKNIMPNEVTYSTVIRGCARSGRLDQALSL 1240
             DI+TYNTLLD    GG MD AFQIM+EMP K+IMPN VTYSTVI G A++GRLD+AL+L
Sbjct: 324  QDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNL 383

Query: 1241 VSEMKYAGIRLDRVSYNNLLAIYASLGRFEEALNVVKEMESTGFRKDVVTYNALLDGFGK 1420
             +EMK+A I LDRVSYN LL+IYA LGRFEEALNV KEMES+G +KD VTYNALL G+GK
Sbjct: 384  FNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGK 443

Query: 1421 QGRYDKVKELFNRMKTEKVPANLLTYSTLISVYLKGGLYQEATEMYKEFKQEGLKADVVF 1600
            QG+Y++VK +F  MK E++  NLLTYSTLI VY KGGLYQEA E+++EFK+ GLKADVV 
Sbjct: 444  QGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVL 503

Query: 1601 YSEIIDSLCKKGFVESSALLLDEMTTKGIQPNVVTYNSIINAFGQSSDTGLSIEQEHE-- 1774
            YS +ID+LCK G VES+   LDEMT +GI+PNVVTYNSII+AFG+S      I+  +E  
Sbjct: 504  YSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGSAECVIDPPYETN 563

Query: 1775 ---IKCLPLMVLEGDANKKLDNSDEDRIIKVFEQLAAGKLSIVEK---ARKEIICVLGVF 1936
               +    L V+E     ++ + ++++IIK+F QLAA K    +K    R+EI+C+L VF
Sbjct: 564  VSKMSSSSLKVVEDATESEVGDKEDNQIIKIFGQLAAEKTCHAKKENRGRQEILCILAVF 623

Query: 1937 RKMHELEIKPNVVTFSAILNACSRCXXXXXXXXXXXXXRLFDNQVYGVAHGLLMGYRENV 2116
             KMHEL+IKPNVVTFSAILNACSRC             RLFDNQVYGVAHGLLMGY +NV
Sbjct: 624  HKMHELDIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYGDNV 683

Query: 2117 WVHALSLFDEVKRMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENTWSDSC 2296
            WV A SLFDEVK+MDSSTASAFYNALTDMLWHFGQ+RGAQLVVLEGKRR VWEN WS+SC
Sbjct: 684  WVQAQSLFDEVKQMDSSTASAFYNALTDMLWHFGQRRGAQLVVLEGKRRHVWENMWSNSC 743

Query: 2297 LDLHLMSSGAARAMVHAWLLNICSIVYEGHELPSLLSILTGWGKHSKVVGDCALKRAIEG 2476
            LDLHLMSSGAARAMVHAWLLNI SIV+EGHELP LLSILTGWGKHSKVVGD AL+RAIE 
Sbjct: 744  LDLHLMSSGAARAMVHAWLLNIRSIVFEGHELPQLLSILTGWGKHSKVVGDGALRRAIEA 803

Query: 2477 LLSGMGSPFRVATSNIGRFISPGPVVAAWMRESSIPNLLVLQDDRAYPETPRLNHLTPNL 2656
            LL+GMG+PFRVA  N+GRFIS G VVAAW+RES    +LVL DDR  P+  R + ++ NL
Sbjct: 804  LLTGMGAPFRVAKCNLGRFISTGAVVAAWLRESGTLKVLVLHDDRTNPDRARCSQIS-NL 862

Query: 2657 QPLHL 2671
            Q L L
Sbjct: 863  QTLPL 867


>ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223545740|gb|EEF47244.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 878

 Score = 1069 bits (2764), Expect = 0.0
 Identities = 547/840 (65%), Positives = 657/840 (78%), Gaps = 9/840 (1%)
 Frame = +2

Query: 176  HNPRHPSPKVSLHPPTPRNPTANKSPVPATVAPGGSSSLHHRNPNF---TPLSASKSELA 346
            H+ R  + KVSL  P P  P+   +P  A  A   +++ H  NP F   +PL + KS+L+
Sbjct: 33   HHHRWTNQKVSLTKP-PLAPSPCNAPKAAAAAAAATTTHHTPNPTFHSLSPLQSQKSDLS 91

Query: 347  ADFSGRRSTRFVSKMHFGRPKAAGSSRHSVVAEDALQQLIRCSGDDRLVESVLLGFQSKL 526
            ADFSGRRSTRFVSK+HFGRPK    +RH+ VA +ALQQ+I+   DD+ +E+VLL F+S+L
Sbjct: 92   ADFSGRRSTRFVSKLHFGRPKT-NMNRHTSVALEALQQVIQYGKDDKALENVLLNFESRL 150

Query: 527  CGSDDYNFLFRELGNRNEWSMAIQCFEFAVSRERRRTEQGKLASSVISVLGRLGKVDLAK 706
            CG DDY FL RELGNR + + A++CFEFAV RE  + EQGKLAS++IS LGRLGKV+LAK
Sbjct: 151  CGPDDYTFLLRELGNRGDSAKAVRCFEFAVRRESGKNEQGKLASAMISTLGRLGKVELAK 210

Query: 707  KVFETAVSEGYGNTVYAYSALISAYAKSGLCDEAIKVFETMKLSGLKPNLVTYNALIDAC 886
             VF+TA+ EGYG TVYA+SALISAY +SG C+EAIKVF++MK +GL PNLVTYNA+IDAC
Sbjct: 211  AVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDAC 270

Query: 887  GKGGADFKRASEIFDDMLSNGFQPDRITFNSLLAVCSGAGLWETALNLFNEMSYRGIDPD 1066
            GKGG +FK+  EIFD MLSNG QPDRITFNSLLAVCS  GLWE A  LF+ M  +GID D
Sbjct: 271  GKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQD 330

Query: 1067 IYTYNTLLDVASSGGHMDSAFQIMAEMPTKNIMPNEVTYSTVIRGCARSGRLDQALSLVS 1246
            I+TYNTLLD    GG MD AF+IM+EMPTKNI+PN VTYST+I G A+ GRLD AL++ +
Sbjct: 331  IFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFN 390

Query: 1247 EMKYAGIRLDRVSYNNLLAIYASLGRFEEALNVVKEMESTGFRKDVVTYNALLDGFGKQG 1426
            EMK+ G+ LDRVSYN LL++YA LGRFE+AL+V KEME+ G RKDVVTYNALL G+GKQ 
Sbjct: 391  EMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQY 450

Query: 1427 RYDKVKELFNRMKTEKVPANLLTYSTLISVYLKGGLYQEATEMYKEFKQEGLKADVVFYS 1606
            RYD+V+ +F  MK  +V  NLLTYSTLI VY KGGLY+EA E+++EFKQ GLKADVV YS
Sbjct: 451  RYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYS 510

Query: 1607 EIIDSLCKKGFVESSALLLDEMTTKGIQPNVVTYNSIINAFGQSSDTGLSIEQEHE---- 1774
             +ID+LCK G VESS  LLDEMT +GI+PNVVTYNSII+AFG+S+     ++   E    
Sbjct: 511  ALIDALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSIIDAFGRSASAQCVVDDSGETTAL 570

Query: 1775 -IKCLPLMVLEGDANKKLDNSDEDRIIKVFEQLAAGKLSIVEKA-RKEIICVLGVFRKMH 1948
             ++ L  +V++     +  + +++RII++F +LAA K    + + ++EI+C+LGVF+KMH
Sbjct: 571  QVESLSSIVVQEAIESQAADKEDNRIIEIFGKLAAEKACEAKNSGKQEILCILGVFQKMH 630

Query: 1949 ELEIKPNVVTFSAILNACSRCXXXXXXXXXXXXXRLFDNQVYGVAHGLLMGYRENVWVHA 2128
            EL+IKPNVVTFSAILNACSRC             RLFDNQVYGVAHGLLMGYRENVW+ A
Sbjct: 631  ELKIKPNVVTFSAILNACSRCDSFEDASMLLEELRLFDNQVYGVAHGLLMGYRENVWLQA 690

Query: 2129 LSLFDEVKRMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENTWSDSCLDLH 2308
             SLFDEVK MDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWEN WSDSCLDLH
Sbjct: 691  QSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENIWSDSCLDLH 750

Query: 2309 LMSSGAARAMVHAWLLNICSIVYEGHELPSLLSILTGWGKHSKVVGDCALKRAIEGLLSG 2488
            LMSSGAARAMVHAWLLNI SIV+EGHELP LLSILTGWGKHSKVVGD AL+RA+E LL G
Sbjct: 751  LMSSGAARAMVHAWLLNIRSIVFEGHELPKLLSILTGWGKHSKVVGDSALRRAVEALLIG 810

Query: 2489 MGSPFRVATSNIGRFISPGPVVAAWMRESSIPNLLVLQDDRAYPETPRLNHLTPNLQPLH 2668
            MG+PFR+A  N+GRFIS G VVAAW++ES    +LVL DDR +PE   L  L+P    LH
Sbjct: 811  MGAPFRLAKCNLGRFISTGSVVAAWLKESGTLEVLVLHDDRTHPENKDLFSLSPLPGLLH 870


>ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
            chloroplastic-like [Cucumis sativus]
          Length = 868

 Score = 1039 bits (2686), Expect = 0.0
 Identities = 531/836 (63%), Positives = 644/836 (77%), Gaps = 8/836 (0%)
 Frame = +2

Query: 188  HPSPKVSLHPPTPRNPTANKSPVPATVAPGGSSSLHHRNPNFTPLSASKSELAADFSGRR 367
            H  P V   P TP +     +  P + +P          P+   L  SKSELA++FSGRR
Sbjct: 43   HKFPLVKPLPSTPGHSATKSTSTPLSQSPNF--------PSLCSLPTSKSELASNFSGRR 94

Query: 368  STRFVSKMHFGRPKAAGSSRHSVVAEDALQQLIRCSGDDRLVESVLLGFQSKLCGSDDYN 547
            STRFVSK HFGRPK++ ++RHS +AE+ L Q+++   DD  ++++LL F+SKLCGS+DY 
Sbjct: 95   STRFVSKFHFGRPKSSMTTRHSAIAEEVLHQVLQFGKDDASLDNILLNFESKLCGSEDYT 154

Query: 548  FLFRELGNRNEWSMAIQCFEFAVSRERRRTEQGKLASSVISVLGRLGKVDLAKKVFETAV 727
            FL RELGNR E   AI+CF+FA+ RE R+ E+GKLAS++IS LGRLGKV+LAK VFETA+
Sbjct: 155  FLLRELGNRGECWKAIRCFDFALVREGRKNERGKLASAMISTLGRLGKVELAKGVFETAL 214

Query: 728  SEGYGNTVYAYSALISAYAKSGLCDEAIKVFETMKLSGLKPNLVTYNALIDACGKGGADF 907
            SEGYGNTV+A+SALISAY KSG  DEAIKVFE+MK+SGLKPNLVTYNA+IDACGKGG +F
Sbjct: 215  SEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEF 274

Query: 908  KRASEIFDDMLSNGFQPDRITFNSLLAVCSGAGLWETALNLFNEMSYRGIDPDIYTYNTL 1087
            KR  EIF++ML NG QPDRIT+NSLLAVCS  GLWE A NLFNEM  RGID D++TYNTL
Sbjct: 275  KRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTL 334

Query: 1088 LDVASSGGHMDSAFQIMAEMPTKNIMPNEVTYSTVIRGCARSGRLDQALSLVSEMKYAGI 1267
            LD    GG MD A++IM EMP K I+PN VTYST+  G A++GRL+ AL+L +EMK+ GI
Sbjct: 335  LDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGI 394

Query: 1268 RLDRVSYNNLLAIYASLGRFEEALNVVKEMESTGFRKDVVTYNALLDGFGKQGRYDKVKE 1447
             LDRVSYN LL+IYA LGRFE+AL V KEM S+G +KDVVTYNALLDG+GKQG++++V  
Sbjct: 395  GLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTR 454

Query: 1448 LFNRMKTEKVPANLLTYSTLISVYLKGGLYQEATEMYKEFKQEGLKADVVFYSEIIDSLC 1627
            +F  MK ++V  NLLTYSTLI VY KG LY+EA E+++EFKQ GLKADVV YSE+I++LC
Sbjct: 455  VFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALC 514

Query: 1628 KKGFVESSALLLDEMTTKGIQPNVVTYNSIINAFGQSSDT-----GLSIEQEHEIKCLPL 1792
            K G V+S+ LLLDEMT +GI+PNVVTYNSII+AFG+S+       G+    E + +    
Sbjct: 515  KNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEFLVDGVGASNERQSESPTF 574

Query: 1793 MVLEGDANKKLDNSDEDRIIKVFEQLAAGKLSIVEKAR---KEIICVLGVFRKMHELEIK 1963
            M++EG    ++ N D+  + K ++QL + K    +K R   +EI  +L VF+KMHELEIK
Sbjct: 575  MLIEGVDESEI-NWDDGHVFKFYQQLVSEKEGPAKKERLGKEEIRSILSVFKKMHELEIK 633

Query: 1964 PNVVTFSAILNACSRCXXXXXXXXXXXXXRLFDNQVYGVAHGLLMGYRENVWVHALSLFD 2143
            PNVVTFSAILNACSRC             RLFDNQVYGVAHGLLMG+ ENVW+ A  LFD
Sbjct: 634  PNVVTFSAILNACSRCKSIEDASMLLEELRLFDNQVYGVAHGLLMGFSENVWIQAQYLFD 693

Query: 2144 EVKRMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENTWSDSCLDLHLMSSG 2323
            EVK+MDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRR+VWE  WSDSCLDLHLMSSG
Sbjct: 694  EVKQMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRKVWETLWSDSCLDLHLMSSG 753

Query: 2324 AARAMVHAWLLNICSIVYEGHELPSLLSILTGWGKHSKVVGDCALKRAIEGLLSGMGSPF 2503
            AARAMVHAWLL I S+V+EGH+LP LLSILTGWGKHSKVVGD AL+RAIE LL+ MG+PF
Sbjct: 754  AARAMVHAWLLGIHSVVFEGHQLPKLLSILTGWGKHSKVVGDGALRRAIEALLTSMGAPF 813

Query: 2504 RVATSNIGRFISPGPVVAAWMRESSIPNLLVLQDDRAYPETPRLNHLTPNLQPLHL 2671
            RVA  NIGR++S G VVAAW++ES    LLVL DDR +P+T  ++ L   LQ + L
Sbjct: 814  RVAKCNIGRYVSTGSVVAAWLKESGTLKLLVLHDDRTHPDTENMD-LISKLQTISL 868


>ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
            chloroplastic-like [Cucumis sativus]
          Length = 868

 Score = 1037 bits (2682), Expect = 0.0
 Identities = 530/836 (63%), Positives = 644/836 (77%), Gaps = 8/836 (0%)
 Frame = +2

Query: 188  HPSPKVSLHPPTPRNPTANKSPVPATVAPGGSSSLHHRNPNFTPLSASKSELAADFSGRR 367
            H  P V   P TP +     +  P + +P          P+   L  SKSELA++FSGRR
Sbjct: 43   HKFPLVKPLPSTPGHSATKSTSTPLSQSPNF--------PSLCSLPTSKSELASNFSGRR 94

Query: 368  STRFVSKMHFGRPKAAGSSRHSVVAEDALQQLIRCSGDDRLVESVLLGFQSKLCGSDDYN 547
            STRFVSK HFGRPK++ ++RHS +AE+ L Q+++   DD  ++++LL F+SKLCGS+DY 
Sbjct: 95   STRFVSKFHFGRPKSSMTTRHSAIAEEVLHQVLQFGKDDASLDNILLNFESKLCGSEDYT 154

Query: 548  FLFRELGNRNEWSMAIQCFEFAVSRERRRTEQGKLASSVISVLGRLGKVDLAKKVFETAV 727
            FL RELGNR E   AI+CF+FA+ RE R+ E+GKLAS++IS LGRLGKV+LAK VFETA+
Sbjct: 155  FLLRELGNRGECWKAIRCFDFALVREGRKNERGKLASAMISTLGRLGKVELAKGVFETAL 214

Query: 728  SEGYGNTVYAYSALISAYAKSGLCDEAIKVFETMKLSGLKPNLVTYNALIDACGKGGADF 907
            SEGYGNTV+A+SALISAY KSG  DEAIKVFE+MK+SGLKPNLVTYNA+IDACGKGG +F
Sbjct: 215  SEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEF 274

Query: 908  KRASEIFDDMLSNGFQPDRITFNSLLAVCSGAGLWETALNLFNEMSYRGIDPDIYTYNTL 1087
            KR  EIF++ML NG QPDRIT+NSLLAVCS  GLWE A NLFNEM  RGID D++TYNTL
Sbjct: 275  KRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTL 334

Query: 1088 LDVASSGGHMDSAFQIMAEMPTKNIMPNEVTYSTVIRGCARSGRLDQALSLVSEMKYAGI 1267
            LD    GG MD A++IM EMP K I+PN VTYST+  G A++GRL+ AL+L +EMK+ GI
Sbjct: 335  LDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGI 394

Query: 1268 RLDRVSYNNLLAIYASLGRFEEALNVVKEMESTGFRKDVVTYNALLDGFGKQGRYDKVKE 1447
             LDRVSYN LL+IYA LGRFE+AL V KEM S+G +KDVVTYNALLDG+GKQG++++V  
Sbjct: 395  GLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTR 454

Query: 1448 LFNRMKTEKVPANLLTYSTLISVYLKGGLYQEATEMYKEFKQEGLKADVVFYSEIIDSLC 1627
            +F  MK ++V  NLLTYSTLI VY KG LY+EA E+++EFKQ GLKADVV YSE+I++LC
Sbjct: 455  VFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALC 514

Query: 1628 KKGFVESSALLLDEMTTKGIQPNVVTYNSIINAFGQSSDT-----GLSIEQEHEIKCLPL 1792
            K G V+S+ LLLDEMT +GI+PNVVTYNSII+AFG+S+       G+    E + +    
Sbjct: 515  KNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEFLVDGVGASNERQSESPSF 574

Query: 1793 MVLEGDANKKLDNSDEDRIIKVFEQLAAGKLSIVEKAR---KEIICVLGVFRKMHELEIK 1963
            M++EG    ++ N D+  + K ++QL + K    +K R   +EI  +L VF+KMHELEIK
Sbjct: 575  MLIEGVDESEI-NWDDGHVFKFYQQLVSEKEGPAKKERLGKEEIRSILSVFKKMHELEIK 633

Query: 1964 PNVVTFSAILNACSRCXXXXXXXXXXXXXRLFDNQVYGVAHGLLMGYRENVWVHALSLFD 2143
            PNVVTFSAILNACSRC             RLFDNQVYGVAHGLLMG+ ENVW+ A  LFD
Sbjct: 634  PNVVTFSAILNACSRCKSIEDASMLLEELRLFDNQVYGVAHGLLMGFSENVWIQAQYLFD 693

Query: 2144 EVKRMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENTWSDSCLDLHLMSSG 2323
            EVK+MDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRR+VWE  WSDSCLDLHLMSSG
Sbjct: 694  EVKQMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRKVWETLWSDSCLDLHLMSSG 753

Query: 2324 AARAMVHAWLLNICSIVYEGHELPSLLSILTGWGKHSKVVGDCALKRAIEGLLSGMGSPF 2503
            AARAMVHAWLL I S+V+EGH+LP LLSILTGWGKHSKVVGD AL+RAIE LL+ MG+PF
Sbjct: 754  AARAMVHAWLLGIHSVVFEGHQLPKLLSILTGWGKHSKVVGDGALRRAIEALLTSMGAPF 813

Query: 2504 RVATSNIGRFISPGPVVAAWMRESSIPNLLVLQDDRAYPETPRLNHLTPNLQPLHL 2671
            RVA  NIGR++S G VVAAW++ES    LLVL DDR +P++  ++ L   LQ + L
Sbjct: 814  RVAKCNIGRYVSTGSVVAAWLKESGTLKLLVLHDDRTHPDSENMD-LISKLQTISL 868


>ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
            gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At2g31400, chloroplastic; Flags: Precursor
            gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis
            thaliana] gi|330253448|gb|AEC08542.1| genomes uncoupled 1
            protein [Arabidopsis thaliana]
          Length = 918

 Score =  991 bits (2561), Expect = 0.0
 Identities = 507/822 (61%), Positives = 614/822 (74%), Gaps = 15/822 (1%)
 Frame = +2

Query: 185  RHPSPKVSLHPPTPRNPTANKSPVPATVAPGGSS-----------SLHHRNPNFTPLSAS 331
            R  SP  + H  T +NP  N  P  A+ +P GS+           +   + PNF+PL   
Sbjct: 69   RFVSPATNNHRQTRQNPNYNHRPYGASSSPRGSAPPPSSVATVAPAQLSQPPNFSPLQTP 128

Query: 332  KSELAADFSGRRSTRFVSKMHFGRPKAAGSSRHSVVAEDALQQLIRCSGDDRLVESVLLG 511
            KS+L++DFSGRRSTRFVSKMHFGR K   ++RHS  AEDALQ  I  SGDD +  S++L 
Sbjct: 129  KSDLSSDFSGRRSTRFVSKMHFGRQKTTMATRHSSAAEDALQNAIDFSGDDEMFHSLMLS 188

Query: 512  FQSKLCGSDDYNFLFRELGNRNEWSMAIQCFEFAVSRERRRTEQGKLASSVISVLGRLGK 691
            F+SKLCGSDD  ++ RELGNRNE   A+  +EFAV RERR+ EQGKLAS++IS LGR GK
Sbjct: 189  FESKLCGSDDCTYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGK 248

Query: 692  VDLAKKVFETAVSEGYGNTVYAYSALISAYAKSGLCDEAIKVFETMKLSGLKPNLVTYNA 871
            V +AK++FETA + GYGNTVYA+SALISAY +SGL +EAI VF +MK  GL+PNLVTYNA
Sbjct: 249  VTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNA 308

Query: 872  LIDACGKGGADFKRASEIFDDMLSNGFQPDRITFNSLLAVCSGAGLWETALNLFNEMSYR 1051
            +IDACGKGG +FK+ ++ FD+M  NG QPDRITFNSLLAVCS  GLWE A NLF+EM+ R
Sbjct: 309  VIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNR 368

Query: 1052 GIDPDIYTYNTLLDVASSGGHMDSAFQIMAEMPTKNIMPNEVTYSTVIRGCARSGRLDQA 1231
             I+ D+++YNTLLD    GG MD AF+I+A+MP K IMPN V+YSTVI G A++GR D+A
Sbjct: 369  RIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEA 428

Query: 1232 LSLVSEMKYAGIRLDRVSYNNLLAIYASLGRFEEALNVVKEMESTGFRKDVVTYNALLDG 1411
            L+L  EM+Y GI LDRVSYN LL+IY  +GR EEAL++++EM S G +KDVVTYNALL G
Sbjct: 429  LNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGG 488

Query: 1412 FGKQGRYDKVKELFNRMKTEKVPANLLTYSTLISVYLKGGLYQEATEMYKEFKQEGLKAD 1591
            +GKQG+YD+VK++F  MK E V  NLLTYSTLI  Y KGGLY+EA E+++EFK  GL+AD
Sbjct: 489  YGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRAD 548

Query: 1592 VVFYSEIIDSLCKKGFVESSALLLDEMTTKGIQPNVVTYNSIINAFGQSSDTGLSIEQEH 1771
            VV YS +ID+LCK G V S+  L+DEMT +GI PNVVTYNSII+AFG+S+    S +  +
Sbjct: 549  VVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSN 608

Query: 1772 EIKCLPLMVLEGDANKKLDNSDEDRIIKVFEQLAAGK----LSIVEKARKEIICVLGVFR 1939
                LP       A   L  ++ +R+I++F QL            E+  +E+ C+L VFR
Sbjct: 609  G-GSLP---FSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFR 664

Query: 1940 KMHELEIKPNVVTFSAILNACSRCXXXXXXXXXXXXXRLFDNQVYGVAHGLLMGYRENVW 2119
            KMH+LEIKPNVVTFSAILNACSRC             RLFDN+VYGV HGLLMG RENVW
Sbjct: 665  KMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNKVYGVVHGLLMGQRENVW 724

Query: 2120 VHALSLFDEVKRMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENTWSDSCL 2299
            + A SLFD+V  MD STASAFYNALTDMLWHFGQKRGA+LV LEG+ RQVWEN WSDSCL
Sbjct: 725  LQAQSLFDKVNEMDGSTASAFYNALTDMLWHFGQKRGAELVALEGRSRQVWENVWSDSCL 784

Query: 2300 DLHLMSSGAARAMVHAWLLNICSIVYEGHELPSLLSILTGWGKHSKVVGDCALKRAIEGL 2479
            DLHLMSSGAARAMVHAWLLNI SIVYEGHELP +LSILTGWGKHSKVVGD AL+RA+E L
Sbjct: 785  DLHLMSSGAARAMVHAWLLNIRSIVYEGHELPKVLSILTGWGKHSKVVGDGALRRAVEVL 844

Query: 2480 LSGMGSPFRVATSNIGRFISPGPVVAAWMRESSIPNLLVLQD 2605
            L GM +PF ++  N+GRF S G VVA W+RES+   LL+L D
Sbjct: 845  LRGMDAPFHLSKCNMGRFTSSGSVVATWLRESATLKLLILHD 886