BLASTX nr result

ID: Atractylodes21_contig00005234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00005234
         (660 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265347.1| PREDICTED: 40S ribosomal protein S20-2 isofo...   239   4e-61
ref|XP_003540910.1| PREDICTED: 40S ribosomal protein S20-2-like ...   236   2e-60
ref|XP_004143650.1| PREDICTED: 40S ribosomal protein S20-2-like ...   234   1e-59
ref|NP_001242027.1| uncharacterized protein LOC100803623 [Glycin...   234   1e-59
ref|NP_001237853.1| uncharacterized protein LOC100499912 [Glycin...   232   5e-59

>ref|XP_002265347.1| PREDICTED: 40S ribosomal protein S20-2 isoform 1 [Vitis vinifera]
           gi|359490182|ref|XP_003634047.1| PREDICTED: 40S
           ribosomal protein S20-2 isoform 2 [Vitis vinifera]
           gi|147777804|emb|CAN62522.1| hypothetical protein
           VITISV_002374 [Vitis vinifera]
          Length = 122

 Score =  239 bits (609), Expect = 4e-61
 Identities = 119/122 (97%), Positives = 121/122 (99%)
 Frame = +3

Query: 81  MAYAAMKPTKPGLEEPQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKKLRVKGPVRMP 260
           MAYAAMKPTKPGLEEPQE IHKIRITLSSKNVKNLEKVCADLVRGAKDK+LRVKGPVRMP
Sbjct: 1   MAYAAMKPTKPGLEEPQEAIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMP 60

Query: 261 TKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIA 440
           TKVL+ITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIA
Sbjct: 61  TKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIA 120

Query: 441 DS 446
           DS
Sbjct: 121 DS 122


>ref|XP_003540910.1| PREDICTED: 40S ribosomal protein S20-2-like [Glycine max]
           gi|356554377|ref|XP_003545523.1| PREDICTED: 40S
           ribosomal protein S20-2-like [Glycine max]
          Length = 122

 Score =  236 bits (603), Expect = 2e-60
 Identities = 118/122 (96%), Positives = 120/122 (98%)
 Frame = +3

Query: 81  MAYAAMKPTKPGLEEPQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKKLRVKGPVRMP 260
           MAYAAMKPTKPGLEE QEQIHKIRITLSSKNVKNLEKVCADLVRGAKDK LRVKGPVRMP
Sbjct: 1   MAYAAMKPTKPGLEESQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKHLRVKGPVRMP 60

Query: 261 TKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIA 440
           TKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDL+SSPDVVKQITSITIEPGVEVEVTIA
Sbjct: 61  TKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIA 120

Query: 441 DS 446
           D+
Sbjct: 121 DA 122


>ref|XP_004143650.1| PREDICTED: 40S ribosomal protein S20-2-like [Cucumis sativus]
           gi|449488600|ref|XP_004158106.1| PREDICTED: 40S
           ribosomal protein S20-2-like [Cucumis sativus]
          Length = 121

 Score =  234 bits (597), Expect = 1e-59
 Identities = 117/121 (96%), Positives = 119/121 (98%)
 Frame = +3

Query: 81  MAYAAMKPTKPGLEEPQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKKLRVKGPVRMP 260
           MAYAAMKPTKPGLE+ QEQIHKIRITLSSKNVKNLEKVCADLVRGAKDK+LRVKGPVRMP
Sbjct: 1   MAYAAMKPTKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMP 60

Query: 261 TKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIA 440
           TKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLFSS DVVKQITSITIEPGVEVEVTIA
Sbjct: 61  TKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQITSITIEPGVEVEVTIA 120

Query: 441 D 443
           D
Sbjct: 121 D 121


>ref|NP_001242027.1| uncharacterized protein LOC100803623 [Glycine max]
           gi|255640525|gb|ACU20548.1| unknown [Glycine max]
          Length = 122

 Score =  234 bits (596), Expect = 1e-59
 Identities = 115/122 (94%), Positives = 120/122 (98%)
 Frame = +3

Query: 81  MAYAAMKPTKPGLEEPQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKKLRVKGPVRMP 260
           MAYAAMK TK GLEEPQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDK+LRVKGPVRMP
Sbjct: 1   MAYAAMKSTKAGLEEPQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMP 60

Query: 261 TKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIA 440
           TKVLNITTRKSPCGEGTNTWDRFELRVHKR+IDL+SSPDVVKQITSITIEPGVEVE+TIA
Sbjct: 61  TKVLNITTRKSPCGEGTNTWDRFELRVHKRIIDLYSSPDVVKQITSITIEPGVEVEITIA 120

Query: 441 DS 446
           D+
Sbjct: 121 DA 122


>ref|NP_001237853.1| uncharacterized protein LOC100499912 [Glycine max]
           gi|255627607|gb|ACU14148.1| unknown [Glycine max]
          Length = 123

 Score =  232 bits (591), Expect = 5e-59
 Identities = 115/120 (95%), Positives = 119/120 (99%)
 Frame = +3

Query: 87  YAAMKPTKPGLEEPQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKKLRVKGPVRMPTK 266
           YAAMKPTKPGLEEPQEQIHKIRITLSSK+VKNLEKVCADLVRGAKDK+LRVKGPVRMPTK
Sbjct: 4   YAAMKPTKPGLEEPQEQIHKIRITLSSKHVKNLEKVCADLVRGAKDKRLRVKGPVRMPTK 63

Query: 267 VLNITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS 446
           VL ITTRKSPCGEGTNTWDRFELRVHKRVIDL+SSPDVVKQITSITIEPGVEVEVTIAD+
Sbjct: 64  VLLITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 123


Top