BLASTX nr result

ID: Atractylodes21_contig00005197 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00005197
         (1112 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB87114.1| cytochrome c oxidase family protein-like [Solanum...   189   1e-45
ref|XP_002285331.1| PREDICTED: cytochrome c oxidase subunit 5b-2...   169   1e-39
gb|AFU52881.1| cytochrome C oxidase subunit Vb [Vitis vinifera]       169   1e-39
gb|AFK44279.1| unknown [Lotus japonicus]                              168   2e-39
gb|AEQ61828.1| cytochrome c oxidase subunit Vb [Dimocarpus longan]    168   3e-39

>gb|ABB87114.1| cytochrome c oxidase family protein-like [Solanum tuberosum]
          Length = 167

 Score =  189 bits (479), Expect = 1e-45
 Identities = 92/147 (62%), Positives = 109/147 (74%), Gaps = 8/147 (5%)
 Frame = +3

Query: 93  MWRRLPSQIRIL---RSVQRSH-----GITTSSPSPVTLRPFADLISRHISSETGNVSKK 248
           MWRRL SQ+R L   RS  +S+      +T+ S SP T RP    ISRH S+ + NV KK
Sbjct: 1   MWRRLSSQVRTLSPLRSTAKSNRLSAAAVTSLSSSPATFRPTVPFISRHFSTASANVVKK 60

Query: 249 KVEDIMPIATGHXXXXXXXXXXGRDILDINFPEGPFGTKEAPAVVKSYYDQRIVGCPGGE 428
            +ED+MPIATGH          G+D+L INFPEGPFGTKEAPAVV+SYYD+RIVGCPG E
Sbjct: 61  -IEDVMPIATGHEREELEAEIQGKDLLAINFPEGPFGTKEAPAVVESYYDKRIVGCPGDE 119

Query: 429 GEDEHDVVWFWLKKGEPHECPVCSQYF 509
           GEDEHDVVWFWL+KG+PHECPVC+Q+F
Sbjct: 120 GEDEHDVVWFWLEKGKPHECPVCAQHF 146


>ref|XP_002285331.1| PREDICTED: cytochrome c oxidase subunit 5b-2, mitochondrial [Vitis
           vinifera] gi|297743391|emb|CBI36258.3| unnamed protein
           product [Vitis vinifera]
          Length = 176

 Score =  169 bits (428), Expect = 1e-39
 Identities = 87/154 (56%), Positives = 104/154 (67%), Gaps = 15/154 (9%)
 Frame = +3

Query: 93  MWR-RLPSQIRILRSVQRSHGITTS----------SPSPVTLRPFADLISRHISSETGNV 239
           MWR RL +Q++ L   + +  +T            SPSP   R  A L SR  S+E+ + 
Sbjct: 1   MWRGRLSAQLQTLARSRSAANLTRLVTGDINRSFISPSPAPFRRTASLFSRQFSAESADN 60

Query: 240 S----KKKVEDIMPIATGHXXXXXXXXXXGRDILDINFPEGPFGTKEAPAVVKSYYDQRI 407
           +    KK+VED+MPIATGH          GRDILD + P GPFGTKEAPAVV+SYYD+RI
Sbjct: 61  AVSKEKKRVEDVMPIATGHEREELEAALDGRDILDADHPVGPFGTKEAPAVVQSYYDKRI 120

Query: 408 VGCPGGEGEDEHDVVWFWLKKGEPHECPVCSQYF 509
           VGCPGGEGEDEHDVVWFWL+KG+ HECPVCSQYF
Sbjct: 121 VGCPGGEGEDEHDVVWFWLEKGKSHECPVCSQYF 154


>gb|AFU52881.1| cytochrome C oxidase subunit Vb [Vitis vinifera]
          Length = 176

 Score =  169 bits (427), Expect = 1e-39
 Identities = 86/154 (55%), Positives = 103/154 (66%), Gaps = 15/154 (9%)
 Frame = +3

Query: 93  MWR-RLPSQIRILRSVQRSHGITTS----------SPSPVTLRPFADLISRHISSETGNV 239
           MWR RL +Q++ L   + +  +T            SPSP   R  A L SR  S+E+ + 
Sbjct: 1   MWRGRLSAQLQTLARSRSAANLTRLVTGDINRSFISPSPAPFRRTASLFSRQFSAESADN 60

Query: 240 S----KKKVEDIMPIATGHXXXXXXXXXXGRDILDINFPEGPFGTKEAPAVVKSYYDQRI 407
           +    KK++ED+MPIATGH          GRDILD + P GPFGTKEAPAVV+SYYD+RI
Sbjct: 61  AVSKEKKRIEDVMPIATGHEREELEAALDGRDILDADHPVGPFGTKEAPAVVQSYYDKRI 120

Query: 408 VGCPGGEGEDEHDVVWFWLKKGEPHECPVCSQYF 509
            GCPGGEGEDEHDVVWFWL+KGE HECPVCSQYF
Sbjct: 121 AGCPGGEGEDEHDVVWFWLEKGESHECPVCSQYF 154


>gb|AFK44279.1| unknown [Lotus japonicus]
          Length = 153

 Score =  168 bits (426), Expect = 2e-39
 Identities = 88/145 (60%), Positives = 99/145 (68%), Gaps = 6/145 (4%)
 Frame = +3

Query: 93  MWRRLPSQIRILRSVQRSHGITTSSPSPVTLRPFADL------ISRHISSETGNVSKKKV 254
           MWRRL S          SH  T ++ SP ++   A L      + RH S  T    KKKV
Sbjct: 1   MWRRLLS----------SHLKTLATCSPQSVSTVAALNCSSVSLLRHFSDTTS--IKKKV 48

Query: 255 EDIMPIATGHXXXXXXXXXXGRDILDINFPEGPFGTKEAPAVVKSYYDQRIVGCPGGEGE 434
           ED+MPIATGH          GRDIL+IN P GPFGTKEAPAVVKSYYD+RIVGCPGGEGE
Sbjct: 49  EDVMPIATGHEREELQANLEGRDILEINHPVGPFGTKEAPAVVKSYYDKRIVGCPGGEGE 108

Query: 435 DEHDVVWFWLKKGEPHECPVCSQYF 509
           DEHDVVWFWL+KG+PHECPVC+QYF
Sbjct: 109 DEHDVVWFWLEKGKPHECPVCAQYF 133


>gb|AEQ61828.1| cytochrome c oxidase subunit Vb [Dimocarpus longan]
          Length = 140

 Score =  168 bits (425), Expect = 3e-39
 Identities = 82/140 (58%), Positives = 98/140 (70%), Gaps = 3/140 (2%)
 Frame = +3

Query: 93  MWRRLPSQIRILRSVQRSHGITTSSPSPVTLRPFAD---LISRHISSETGNVSKKKVEDI 263
           MWRR+ S      ++  S   ++ + S    R  A      +R +SS++G   KKKVED+
Sbjct: 1   MWRRICSSHLKALALSHSRSASSIAVSAAANRSLASPPLFTARLLSSDSGTSVKKKVEDV 60

Query: 264 MPIATGHXXXXXXXXXXGRDILDINFPEGPFGTKEAPAVVKSYYDQRIVGCPGGEGEDEH 443
           MPIATGH          GR +LDI+FP GPFGTKEAPAVVKSYYD+RIVGCPGGEGEDEH
Sbjct: 61  MPIATGHEREELAAELEGRKLLDIDFPVGPFGTKEAPAVVKSYYDKRIVGCPGGEGEDEH 120

Query: 444 DVVWFWLKKGEPHECPVCSQ 503
           DVVWFWL+KG+PHECPVCSQ
Sbjct: 121 DVVWFWLEKGKPHECPVCSQ 140


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