BLASTX nr result

ID: Atractylodes21_contig00005166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00005166
         (1065 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593126.1| Zinc finger MYM-type protein [Medicago trunc...    58   3e-06
dbj|BAA36225.1| transposase [Ipomoea purpurea]                         57   6e-06

>ref|XP_003593126.1| Zinc finger MYM-type protein [Medicago truncatula]
           gi|355482174|gb|AES63377.1| Zinc finger MYM-type protein
           [Medicago truncatula]
          Length = 754

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 29/46 (63%), Positives = 38/46 (82%)
 Frame = -3

Query: 850 VASLTTDGSFSAMNIVKTRLRNKMEHEFLNDSLVLFIEKKFREDQF 713
           V++ TT+ SFSAM ++KTRLRNKME EFL DS++L+IEK+   DQF
Sbjct: 691 VSTATTERSFSAMKLIKTRLRNKMEDEFLADSMMLYIEKEI-ADQF 735


>dbj|BAA36225.1| transposase [Ipomoea purpurea]
          Length = 808

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 29/47 (61%), Positives = 37/47 (78%)
 Frame = -3

Query: 871 TFDLIYRVASLTTDGSFSAMNIVKTRLRNKMEHEFLNDSLVLFIEKK 731
           T  L   V++ TT+ SFSAMNIVKT LRNKME EFL+D L+++IEK+
Sbjct: 738 TLVLTLPVSTATTERSFSAMNIVKTTLRNKMEDEFLSDCLLVYIEKQ 784


Top