BLASTX nr result

ID: Atractylodes21_contig00005140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00005140
         (834 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267478.1| PREDICTED: 60S ribosomal protein L27 [Vitis ...   146   3e-41
emb|CAN79575.1| hypothetical protein VITISV_032808 [Vitis vinifera]   146   3e-41
ref|XP_002277425.1| PREDICTED: 60S ribosomal protein L27-3 isofo...   147   1e-40
dbj|BAA96367.1| ribosomal protein L27 [Panax ginseng]                 143   3e-39
gb|ACF06535.1| 60S ribosomal protein L27 [Elaeis guineensis] gi|...   137   1e-37

>ref|XP_002267478.1| PREDICTED: 60S ribosomal protein L27 [Vitis vinifera]
          Length = 135

 Score =  146 bits (368), Expect(2) = 3e-41
 Identities = 74/92 (80%), Positives = 76/92 (82%)
 Frame = +1

Query: 232 AGIAKYPKKVIRKDSAKKTAKKSRVKAFIKLVNYNHIMPTRYXXXXXXXXXXXXXALQSH 411
           AGIAKYPKKVIRKDSAKKTAKKSRVKAFIKLVNYNHIMPTRY              LQS 
Sbjct: 44  AGIAKYPKKVIRKDSAKKTAKKSRVKAFIKLVNYNHIMPTRYTLDVDLKDVVSPDVLQSR 103

Query: 412 DRKVTAAKETKARLEERFKTGKNRWFFSKLRF 507
           D+KVTAAKETK +LEERFKTGKNRWFFSKLRF
Sbjct: 104 DKKVTAAKETKKKLEERFKTGKNRWFFSKLRF 135



 Score = 49.3 bits (116), Expect(2) = 3e-41
 Identities = 23/28 (82%), Positives = 26/28 (92%)
 Frame = +3

Query: 51  MKFLKPHKAVVMLNGRFAGRKGVIVRSF 134
           +KFLKP+KAVV+L GRFAGRK VIVRSF
Sbjct: 2   VKFLKPNKAVVLLQGRFAGRKAVIVRSF 29


>emb|CAN79575.1| hypothetical protein VITISV_032808 [Vitis vinifera]
          Length = 135

 Score =  146 bits (368), Expect(2) = 3e-41
 Identities = 74/92 (80%), Positives = 76/92 (82%)
 Frame = +1

Query: 232 AGIAKYPKKVIRKDSAKKTAKKSRVKAFIKLVNYNHIMPTRYXXXXXXXXXXXXXALQSH 411
           AGIAKYPKKVIRKDSAKKTAKKSRVKAFIKLVNYNHIMPTRY              LQS 
Sbjct: 44  AGIAKYPKKVIRKDSAKKTAKKSRVKAFIKLVNYNHIMPTRYTLDVNLKDVVSPDVLQSR 103

Query: 412 DRKVTAAKETKARLEERFKTGKNRWFFSKLRF 507
           D+KVTAAKETK +LEERFKTGKNRWFFSKLRF
Sbjct: 104 DKKVTAAKETKKKLEERFKTGKNRWFFSKLRF 135



 Score = 49.3 bits (116), Expect(2) = 3e-41
 Identities = 23/28 (82%), Positives = 26/28 (92%)
 Frame = +3

Query: 51  MKFLKPHKAVVMLNGRFAGRKGVIVRSF 134
           +KFLKP+KAVV+L GRFAGRK VIVRSF
Sbjct: 2   VKFLKPNKAVVLLQGRFAGRKAVIVRSF 29


>ref|XP_002277425.1| PREDICTED: 60S ribosomal protein L27-3 isoform 1 [Vitis vinifera]
          Length = 135

 Score =  147 bits (371), Expect(2) = 1e-40
 Identities = 74/92 (80%), Positives = 77/92 (83%)
 Frame = +1

Query: 232 AGIAKYPKKVIRKDSAKKTAKKSRVKAFIKLVNYNHIMPTRYXXXXXXXXXXXXXALQSH 411
           AGIAKYPKKVIRKDSAKKTAKKSRVKAFIKLVNYNH+MPTRY             ALQS 
Sbjct: 44  AGIAKYPKKVIRKDSAKKTAKKSRVKAFIKLVNYNHLMPTRYTLDVDLKDVVTVDALQSR 103

Query: 412 DRKVTAAKETKARLEERFKTGKNRWFFSKLRF 507
           D+KVTAAKETKAR EERFKTGKNRWFF+KLRF
Sbjct: 104 DKKVTAAKETKARFEERFKTGKNRWFFTKLRF 135



 Score = 45.8 bits (107), Expect(2) = 1e-40
 Identities = 22/28 (78%), Positives = 25/28 (89%)
 Frame = +3

Query: 51  MKFLKPHKAVVMLNGRFAGRKGVIVRSF 134
           +KFLK +KAVV+L GRFAGRK VIVRSF
Sbjct: 2   VKFLKQNKAVVVLQGRFAGRKAVIVRSF 29


>dbj|BAA96367.1| ribosomal protein L27 [Panax ginseng]
          Length = 135

 Score =  143 bits (361), Expect(2) = 3e-39
 Identities = 73/92 (79%), Positives = 76/92 (82%)
 Frame = +1

Query: 232 AGIAKYPKKVIRKDSAKKTAKKSRVKAFIKLVNYNHIMPTRYXXXXXXXXXXXXXALQSH 411
           AGI+KYPKKVIRKDSAKKTAKKSRVKAFIKLVN NHIMPTRY              LQS 
Sbjct: 44  AGISKYPKKVIRKDSAKKTAKKSRVKAFIKLVNCNHIMPTRYTLDVDLKDVVTVDCLQSR 103

Query: 412 DRKVTAAKETKARLEERFKTGKNRWFFSKLRF 507
           D+KVTAAKETKARLEERFKTGKNRWFF+KLRF
Sbjct: 104 DKKVTAAKETKARLEERFKTGKNRWFFTKLRF 135



 Score = 45.4 bits (106), Expect(2) = 3e-39
 Identities = 19/28 (67%), Positives = 26/28 (92%)
 Frame = +3

Query: 51  MKFLKPHKAVVMLNGRFAGRKGVIVRSF 134
           +K LKP+KAV++LNGR+AGRK VI++SF
Sbjct: 2   VKVLKPNKAVIVLNGRYAGRKSVIIKSF 29


>gb|ACF06535.1| 60S ribosomal protein L27 [Elaeis guineensis]
           gi|448872692|gb|AGE46031.1| 60S ribosomal protein l27
           [Elaeis guineensis]
          Length = 135

 Score =  137 bits (346), Expect(2) = 1e-37
 Identities = 68/92 (73%), Positives = 73/92 (79%)
 Frame = +1

Query: 232 AGIAKYPKKVIRKDSAKKTAKKSRVKAFIKLVNYNHIMPTRYXXXXXXXXXXXXXALQSH 411
           AGI KYPKKVIRKDSAKKTAKKSRVKAF+K+VNY+HIMPTRY              LQS 
Sbjct: 44  AGILKYPKKVIRKDSAKKTAKKSRVKAFLKMVNYSHIMPTRYTLDVDLKDVVTLDVLQSR 103

Query: 412 DRKVTAAKETKARLEERFKTGKNRWFFSKLRF 507
           D+KV A KETKAR EERFKTGKNRWFF+KLRF
Sbjct: 104 DKKVAACKETKARFEERFKTGKNRWFFTKLRF 135



 Score = 45.4 bits (106), Expect(2) = 1e-37
 Identities = 21/28 (75%), Positives = 24/28 (85%)
 Frame = +3

Query: 51  MKFLKPHKAVVMLNGRFAGRKGVIVRSF 134
           +KFLKP KAV++L GRFAGRK VIVR F
Sbjct: 2   VKFLKPGKAVIVLQGRFAGRKAVIVRCF 29


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