BLASTX nr result

ID: Atractylodes21_contig00005111 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00005111
         (1026 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529271.1| Single-stranded DNA-binding protein, mitocho...   288   2e-75
ref|XP_002278555.1| PREDICTED: single-stranded DNA-binding prote...   281   2e-73
ref|XP_003536057.1| PREDICTED: single-stranded DNA-binding prote...   272   1e-70
gb|AFK40642.1| unknown [Lotus japonicus]                              271   2e-70
ref|XP_002874672.1| mitochondrially targeted single-stranded DNA...   271   2e-70

>ref|XP_002529271.1| Single-stranded DNA-binding protein, mitochondrial precursor,
           putative [Ricinus communis] gi|223531260|gb|EEF33103.1|
           Single-stranded DNA-binding protein, mitochondrial
           precursor, putative [Ricinus communis]
          Length = 213

 Score =  288 bits (736), Expect = 2e-75
 Identities = 137/154 (88%), Positives = 149/154 (96%)
 Frame = -1

Query: 801 DFLPQKPDLQMQGVDPRKGWGFRGVHKAIICGKVGQAPLQKILRNGRTVTIFTVGTGGMF 622
           DFL +KP+LQ+QGVDPRKGWGFRGVHKAIICGKVGQAP+QKILRNGRTVTIFTVGTGGMF
Sbjct: 59  DFLGEKPELQIQGVDPRKGWGFRGVHKAIICGKVGQAPVQKILRNGRTVTIFTVGTGGMF 118

Query: 621 DQRTIGAKDLPKPAQWHRIAVHNETLGAYAVQQLAKNSSVYVEGDIETRVYNDSINGEVK 442
           DQR +GAKDLPKPAQWHRIAVHNETLGAYAVQQLAKNSSVYVEG+IETRVYNDSI+GEVK
Sbjct: 119 DQRIVGAKDLPKPAQWHRIAVHNETLGAYAVQQLAKNSSVYVEGEIETRVYNDSISGEVK 178

Query: 441 NIPEICIRRDGKIRLFKTGESISSISFDELREGL 340
           NIPEICIRRDGKIRL  +G+++S ISFD+LREGL
Sbjct: 179 NIPEICIRRDGKIRLVTSGKNVSDISFDDLREGL 212


>ref|XP_002278555.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
           [Vitis vinifera] gi|296089740|emb|CBI39559.3| unnamed
           protein product [Vitis vinifera]
          Length = 208

 Score =  281 bits (719), Expect = 2e-73
 Identities = 152/215 (70%), Positives = 164/215 (76%)
 Frame = -1

Query: 984 MSSVARNLTRSLRVXXXXXXXXXXSFAVGAQGNWKKFYXXXXXXXXXXXXXXXXXXXXXD 805
           MSS+A NL R LRV             VG Q N K +Y                     +
Sbjct: 1   MSSLA-NLARFLRVRPTTS------LVVGVQKNSKAWYSTVSFDGGDGDGKNGEGEESDN 53

Query: 804 ADFLPQKPDLQMQGVDPRKGWGFRGVHKAIICGKVGQAPLQKILRNGRTVTIFTVGTGGM 625
            D + +KP+LQ+QGVDPRKGWGFRGVHKAIICGKVGQAP+QKILRNGRTVTIFTVGTGGM
Sbjct: 54  -DLVTEKPNLQLQGVDPRKGWGFRGVHKAIICGKVGQAPVQKILRNGRTVTIFTVGTGGM 112

Query: 624 FDQRTIGAKDLPKPAQWHRIAVHNETLGAYAVQQLAKNSSVYVEGDIETRVYNDSINGEV 445
           FDQR IG KDLPKPAQWHRIAVHNE LGAYAVQQL KNSSVYVEGDIE RVYNDSINGEV
Sbjct: 113 FDQR-IGGKDLPKPAQWHRIAVHNEPLGAYAVQQLVKNSSVYVEGDIEVRVYNDSINGEV 171

Query: 444 KNIPEICIRRDGKIRLFKTGESISSISFDELREGL 340
           K++PEICIRRDG+IRL KTGESIS+IS DELREGL
Sbjct: 172 KHVPEICIRRDGRIRLIKTGESISNISVDELREGL 206


>ref|XP_003536057.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
           [Glycine max]
          Length = 217

 Score =  272 bits (695), Expect = 1e-70
 Identities = 129/154 (83%), Positives = 139/154 (90%)
 Frame = -1

Query: 801 DFLPQKPDLQMQGVDPRKGWGFRGVHKAIICGKVGQAPLQKILRNGRTVTIFTVGTGGMF 622
           DFL +KP+LQ+QGVDP+KGWGFRGVHKAIICGKVGQAP+QKILRNGR +TIFTVGTGGMF
Sbjct: 63  DFLGEKPELQLQGVDPKKGWGFRGVHKAIICGKVGQAPVQKILRNGRNITIFTVGTGGMF 122

Query: 621 DQRTIGAKDLPKPAQWHRIAVHNETLGAYAVQQLAKNSSVYVEGDIETRVYNDSINGEVK 442
           DQR  G KDLPKPAQWHRIAVHN+ LG YAVQQL KNSSVYVEGDIETRVYNDSING VK
Sbjct: 123 DQRIQGPKDLPKPAQWHRIAVHNDILGTYAVQQLFKNSSVYVEGDIETRVYNDSINGNVK 182

Query: 441 NIPEICIRRDGKIRLFKTGESISSISFDELREGL 340
           +IPEIC+RRDG+IRL K GESI   S DELREGL
Sbjct: 183 SIPEICVRRDGRIRLIKNGESIDKTSLDELREGL 216


>gb|AFK40642.1| unknown [Lotus japonicus]
          Length = 220

 Score =  271 bits (693), Expect = 2e-70
 Identities = 127/154 (82%), Positives = 141/154 (91%)
 Frame = -1

Query: 801 DFLPQKPDLQMQGVDPRKGWGFRGVHKAIICGKVGQAPLQKILRNGRTVTIFTVGTGGMF 622
           DFL  KP+LQ+QGVDP++GWGFRGVHKAIICGKVGQAP+QKILRNG+ VTIFTVGTGGM 
Sbjct: 66  DFLGGKPELQLQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMS 125

Query: 621 DQRTIGAKDLPKPAQWHRIAVHNETLGAYAVQQLAKNSSVYVEGDIETRVYNDSINGEVK 442
           DQR +GA+D+PKP QWHRIAVHN+ LGAYAVQQ+ KNSSVYVEGDIETRVYNDSINGEVK
Sbjct: 126 DQRIVGARDMPKPPQWHRIAVHNDVLGAYAVQQICKNSSVYVEGDIETRVYNDSINGEVK 185

Query: 441 NIPEICIRRDGKIRLFKTGESISSISFDELREGL 340
           +IPEIC+RRDGKIRL K+GES   IS DELREGL
Sbjct: 186 SIPEICVRRDGKIRLIKSGESADKISLDELREGL 219


>ref|XP_002874672.1| mitochondrially targeted single-stranded DNA binding protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297320509|gb|EFH50931.1| mitochondrially targeted
           single-stranded DNA binding protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 201

 Score =  271 bits (692), Expect = 2e-70
 Identities = 129/155 (83%), Positives = 143/155 (92%)
 Frame = -1

Query: 801 DFLPQKPDLQMQGVDPRKGWGFRGVHKAIICGKVGQAPLQKILRNGRTVTIFTVGTGGMF 622
           + + ++P+LQ  GVDPRKGWGFRGVH+AIICGKVGQAPLQKILRNGRTVTIFTVGTGGMF
Sbjct: 47  EIVSERPELQPHGVDPRKGWGFRGVHRAIICGKVGQAPLQKILRNGRTVTIFTVGTGGMF 106

Query: 621 DQRTIGAKDLPKPAQWHRIAVHNETLGAYAVQQLAKNSSVYVEGDIETRVYNDSINGEVK 442
           DQR +GA + PKPAQWHRIAVHNE LG+YAVQ+LAKNSSVYVEGDIETRVYNDSI+ EVK
Sbjct: 107 DQRLVGATNQPKPAQWHRIAVHNEVLGSYAVQKLAKNSSVYVEGDIETRVYNDSISSEVK 166

Query: 441 NIPEICIRRDGKIRLFKTGESISSISFDELREGLI 337
           +IPEIC+RRDGKIRL K GESIS ISFDEL+EGLI
Sbjct: 167 SIPEICVRRDGKIRLIKYGESISKISFDELKEGLI 201


Top