BLASTX nr result

ID: Atractylodes21_contig00004956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00004956
         (1267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554280.1| PREDICTED: KH domain-containing protein At4g...   373   e-101
emb|CBI35182.3| unnamed protein product [Vitis vinifera]              371   e-100
ref|XP_002269249.1| PREDICTED: poly(rC)-binding protein 3-like [...   371   e-100
ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus ...   369   e-100
ref|XP_003521274.1| PREDICTED: KH domain-containing protein At4g...   364   2e-98

>ref|XP_003554280.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine max]
          Length = 528

 Score =  373 bits (957), Expect = e-101
 Identities = 207/353 (58%), Positives = 242/353 (68%), Gaps = 12/353 (3%)
 Frame = -3

Query: 1034 VLISAKEEPDASISPAMDGLLKVHQRVIDADSDSTHAPPGGVATICTRLLVAGTQGGSLI 855
            V++SAKEEPD  I PA+DGLL+VH++VI+ D D   +      ++ TRLLVA TQ GSLI
Sbjct: 172  VMVSAKEEPDCPIPPAVDGLLRVHKQVINVDRDLADSALAAGRSVVTRLLVADTQAGSLI 231

Query: 854  GKQGATIKTIQDSSNCKIRVIGGENLPIFALPDDSVVEIQGEPTGVHKAVELIATHLRKF 675
            GKQG+TIK+IQD S C IRV+G ENLPIFAL DDS+VEIQGE  GVHKAVELIA HLRKF
Sbjct: 232  GKQGSTIKSIQDGSGCTIRVLGSENLPIFALRDDSIVEIQGESAGVHKAVELIAVHLRKF 291

Query: 674  LVDRSVIGIFEMQMQMPNARXXXXXXXXXXXXXXXXXXPMNAGGGPGFGPT-----QYAP 510
            LVDRS++G+FE QMQM + R                  P  AGGG G GP      QY P
Sbjct: 292  LVDRSIVGVFETQMQMSDVRVNQNLPPHQNWGPPPQGFPAPAGGGGGGGPAFAPNHQYMP 351

Query: 509  PQHQYDNYYPRVDMPPPMDKQPRQG-PPSYGRDPSMGPPHSASVQPQQSIVTKVSQNMQI 333
            P H YD+YYP  ++ PPMDK   QG PP+Y RD SMG  HS+S QPQQS+VTKV+Q+MQI
Sbjct: 352  PSHHYDSYYPPTEL-PPMDKHLHQGPPPAYARDASMG-IHSSSAQPQQSVVTKVTQHMQI 409

Query: 332  PLSYADAVIGTSGTNISYIRRASGATIAIQETRGVPDEMTVEINGSASQVQTAQQLIQNF 153
            PL+YADAVIG SGTNISYIRRASGA+I IQETRGVP EMTVEI+G++SQ+Q AQQL+QNF
Sbjct: 410  PLTYADAVIGASGTNISYIRRASGASITIQETRGVPGEMTVEISGTSSQIQAAQQLVQNF 469

Query: 152  VXXXXXXXXXXXXXXXXXXXXXXXGHAPAYPSQPPP------TGHAPAAADYG 12
            +                         AP Y   PPP      TGHAP +ADYG
Sbjct: 470  MAEAASATQDPMGGSVSQGYSAYPTTAPVY--APPPTSAGGHTGHAP-SADYG 519


>emb|CBI35182.3| unnamed protein product [Vitis vinifera]
          Length = 511

 Score =  371 bits (952), Expect = e-100
 Identities = 197/343 (57%), Positives = 235/343 (68%), Gaps = 2/343 (0%)
 Frame = -3

Query: 1034 VLISAKEEPDASISPAMDGLLKVHQRVIDA-DSDSTHAPPGGVATICTRLLVAGTQGGSL 858
            V++SAKEEPD+S+ PAMDGLLKVH+R++D  + DS+H PPGG   + TRLLVA +Q GSL
Sbjct: 164  VMVSAKEEPDSSLPPAMDGLLKVHKRIVDGLEGDSSHMPPGG--KVSTRLLVAASQAGSL 221

Query: 857  IGKQGATIKTIQDSSNCKIRVIGGENLPIFALPDDSVVEIQGEPTGVHKAVELIATHLRK 678
            IGKQG T+K+IQ++SNC +RV+G E+LPIFAL DD VVE+ GEP GVHKAVELIA+HLRK
Sbjct: 222  IGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLRK 281

Query: 677  FLVDRSVIGIFEMQMQMPNARXXXXXXXXXXXXXXXXXXPMNAGGGPGFGPTQ-YAPPQH 501
            FLVDRSVI +FEMQMQM N                      NA GGPGFGP   Y PP  
Sbjct: 282  FLVDRSVIPLFEMQMQMSNPPIEHMPPHQPWGPPQGLPP--NASGGPGFGPNPPYMPPPR 339

Query: 500  QYDNYYPRVDMPPPMDKQPRQGPPSYGRDPSMGPPHSASVQPQQSIVTKVSQNMQIPLSY 321
            Q D+YYP  ++PPP++KQP QG  +YGR+  MG    +S QP  S++T+V+Q MQIPLSY
Sbjct: 340  QLDSYYPPPELPPPVEKQPHQGISAYGREVPMGGHAPSSAQPAPSMITQVTQQMQIPLSY 399

Query: 320  ADAVIGTSGTNISYIRRASGATIAIQETRGVPDEMTVEINGSASQVQTAQQLIQNFVXXX 141
            ADAVIGT+G +ISYIRRASGAT+ IQETRGVP EMTVEING+ASQVQ AQQLIQNF+   
Sbjct: 400  ADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEINGTASQVQAAQQLIQNFMAEA 459

Query: 140  XXXXXXXXXXXXXXXXXXXXGHAPAYPSQPPPTGHAPAAADYG 12
                                 H   Y S      HA     YG
Sbjct: 460  AAPAQAQAGGSADQGYNSYAAHGSMYASPASNPAHASHTGGYG 502


>ref|XP_002269249.1| PREDICTED: poly(rC)-binding protein 3-like [Vitis vinifera]
          Length = 442

 Score =  371 bits (952), Expect = e-100
 Identities = 197/343 (57%), Positives = 235/343 (68%), Gaps = 2/343 (0%)
 Frame = -3

Query: 1034 VLISAKEEPDASISPAMDGLLKVHQRVIDA-DSDSTHAPPGGVATICTRLLVAGTQGGSL 858
            V++SAKEEPD+S+ PAMDGLLKVH+R++D  + DS+H PPGG   + TRLLVA +Q GSL
Sbjct: 95   VMVSAKEEPDSSLPPAMDGLLKVHKRIVDGLEGDSSHMPPGG--KVSTRLLVAASQAGSL 152

Query: 857  IGKQGATIKTIQDSSNCKIRVIGGENLPIFALPDDSVVEIQGEPTGVHKAVELIATHLRK 678
            IGKQG T+K+IQ++SNC +RV+G E+LPIFAL DD VVE+ GEP GVHKAVELIA+HLRK
Sbjct: 153  IGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLRK 212

Query: 677  FLVDRSVIGIFEMQMQMPNARXXXXXXXXXXXXXXXXXXPMNAGGGPGFGPTQ-YAPPQH 501
            FLVDRSVI +FEMQMQM N                      NA GGPGFGP   Y PP  
Sbjct: 213  FLVDRSVIPLFEMQMQMSNPPIEHMPPHQPWGPPQGLPP--NASGGPGFGPNPPYMPPPR 270

Query: 500  QYDNYYPRVDMPPPMDKQPRQGPPSYGRDPSMGPPHSASVQPQQSIVTKVSQNMQIPLSY 321
            Q D+YYP  ++PPP++KQP QG  +YGR+  MG    +S QP  S++T+V+Q MQIPLSY
Sbjct: 271  QLDSYYPPPELPPPVEKQPHQGISAYGREVPMGGHAPSSAQPAPSMITQVTQQMQIPLSY 330

Query: 320  ADAVIGTSGTNISYIRRASGATIAIQETRGVPDEMTVEINGSASQVQTAQQLIQNFVXXX 141
            ADAVIGT+G +ISYIRRASGAT+ IQETRGVP EMTVEING+ASQVQ AQQLIQNF+   
Sbjct: 331  ADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEINGTASQVQAAQQLIQNFMAEA 390

Query: 140  XXXXXXXXXXXXXXXXXXXXGHAPAYPSQPPPTGHAPAAADYG 12
                                 H   Y S      HA     YG
Sbjct: 391  AAPAQAQAGGSADQGYNSYAAHGSMYASPASNPAHASHTGGYG 433


>ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus communis]
            gi|223538749|gb|EEF40349.1| Poly(rC)-binding protein,
            putative [Ricinus communis]
          Length = 548

 Score =  369 bits (948), Expect = e-100
 Identities = 191/342 (55%), Positives = 236/342 (69%), Gaps = 1/342 (0%)
 Frame = -3

Query: 1034 VLISAKEEPDASISPAMDGLLKVHQRVIDA-DSDSTHAPPGGVATICTRLLVAGTQGGSL 858
            V++SAKEEPD+++ PAMDGLL+VH+R++D  D DS+HA  G    + TRLLV  +Q GSL
Sbjct: 199  VMVSAKEEPDSALPPAMDGLLRVHKRIVDGLDGDSSHASSGTGTKVSTRLLVPASQAGSL 258

Query: 857  IGKQGATIKTIQDSSNCKIRVIGGENLPIFALPDDSVVEIQGEPTGVHKAVELIATHLRK 678
            IGKQG T+K+IQ++S+C +RV+G E+LP+FAL DD VVE+ G+  GVHKAVELIA+HLRK
Sbjct: 259  IGKQGGTVKSIQEASSCVVRVLGAEDLPVFALQDDRVVEVLGDAAGVHKAVELIASHLRK 318

Query: 677  FLVDRSVIGIFEMQMQMPNARXXXXXXXXXXXXXXXXXXPMNAGGGPGFGPTQYAPPQHQ 498
            FLVDRS+I +FEM MQM N                    P NAGGGPG+G  QY PP  Q
Sbjct: 319  FLVDRSIIPLFEMHMQMQNPPHMEHMPPHQSWGPPQGIPP-NAGGGPGYGNPQYMPPPRQ 377

Query: 497  YDNYYPRVDMPPPMDKQPRQGPPSYGRDPSMGPPHSASVQPQQSIVTKVSQNMQIPLSYA 318
             +NYYP  D+PPPM+KQP QG  +YGR+  MG   S++ Q   S++T+++Q MQIPLSYA
Sbjct: 378  IENYYPPADLPPPMEKQPHQGISAYGREAPMGVHGSSNSQAAPSMITQITQQMQIPLSYA 437

Query: 317  DAVIGTSGTNISYIRRASGATIAIQETRGVPDEMTVEINGSASQVQTAQQLIQNFVXXXX 138
            DAVIGT+GT+ISYIRRASGAT+ IQETRGVP EMTVEI+G+ASQVQTAQQLIQNF+    
Sbjct: 438  DAVIGTAGTSISYIRRASGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAG 497

Query: 137  XXXXXXXXXXXXXXXXXXXGHAPAYPSQPPPTGHAPAAADYG 12
                                H   Y S P   GHA     YG
Sbjct: 498  APTQAQTGGSTDQGYNPYAAHGSVYASPPSNPGHAGHTGGYG 539


>ref|XP_003521274.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine max]
          Length = 529

 Score =  364 bits (935), Expect = 2e-98
 Identities = 203/353 (57%), Positives = 240/353 (67%), Gaps = 12/353 (3%)
 Frame = -3

Query: 1034 VLISAKEEPDASISPAMDGLLKVHQRVIDADSDSTHAPPGGVATICTRLLVAGTQGGSLI 855
            V++SAKEEPD  I PA+DGLL+VH++VI+ D D   +      ++ TRLLVA TQ GSLI
Sbjct: 173  VMVSAKEEPDRPIPPAIDGLLRVHKQVINVDRDLVDSALAAGRSVVTRLLVADTQAGSLI 232

Query: 854  GKQGATIKTIQDSSNCKIRVIGGENLPIFALPDDSVVEIQGEPTGVHKAVELIATHLRKF 675
            GKQG+TIK+IQD S C IRV+G ENLP+FAL DDS+VEIQGE  GVHKAVELIA HLRKF
Sbjct: 233  GKQGSTIKSIQDGSGCTIRVLGSENLPVFALRDDSIVEIQGESAGVHKAVELIAVHLRKF 292

Query: 674  LVDRSVIGIFEMQMQMPNARXXXXXXXXXXXXXXXXXXPMNA---GGGPGFGPT-QYAPP 507
            LVDRS++G+FE QMQ P+ R                  P  A   GGGP F P  QY PP
Sbjct: 293  LVDRSIVGVFETQMQRPDVRVNQNVPPHQNWGPPPQGFPAPAGGGGGGPAFAPNHQYMPP 352

Query: 506  QHQYDNYYPRVDMPPPMDKQPRQG-PPSYGRDPSMGPPHSASVQPQQSIVTKVSQNMQIP 330
             H YD+YYP  ++ PPMDK   QG PP+Y +D SMG  HS+S  PQQS+VTKV+Q+MQIP
Sbjct: 353  SHHYDSYYPPTEL-PPMDKHLHQGPPPAYAKDASMG-IHSSSAPPQQSVVTKVTQHMQIP 410

Query: 329  LSYADAVIGTSGTNISYIRRASGATIAIQETRGVPDEMTVEINGSASQVQTAQQLIQNFV 150
            L+YADAVIG SGTNISYIRRASGA+I IQETRGVP EMTVEI+G++SQ+Q AQQL+QNF+
Sbjct: 411  LTYADAVIGASGTNISYIRRASGASITIQETRGVPGEMTVEISGTSSQIQAAQQLVQNFM 470

Query: 149  XXXXXXXXXXXXXXXXXXXXXXXGHAPAYPSQPPP-------TGHAPAAADYG 12
                                     AP Y   PP        TGHAP +ADYG
Sbjct: 471  AEAASATQDPMGGSVSQGYSAYPTTAPVY--APPTSAGGGGHTGHAP-SADYG 520


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