BLASTX nr result

ID: Atractylodes21_contig00004918 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00004918
         (637 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor...   162   4e-38
ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor...   162   4e-38
emb|CAN82460.1| hypothetical protein VITISV_005515 [Vitis vinifera]   160   2e-37
ref|XP_002331832.1| predicted protein [Populus trichocarpa] gi|2...   156   3e-36
ref|XP_002318357.1| predicted protein [Populus trichocarpa] gi|2...   154   2e-35

>ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like [Vitis vinifera]
          Length = 1172

 Score =  162 bits (411), Expect = 4e-38
 Identities = 84/118 (71%), Positives = 92/118 (77%)
 Frame = +1

Query: 139 MTSQTKEPSLKKLEYLSLVSKVCTELESHLGFGDKVLAEFITEIGRKCETVDEFDKKLKE 318
           M+   +   LKKLEYLSLVSKVCTELE+HLG GDKVLAEFIT++GRKCETVDEFD KLKE
Sbjct: 1   MSVDAQNDGLKKLEYLSLVSKVCTELETHLGVGDKVLAEFITDMGRKCETVDEFDSKLKE 60

Query: 319 NGAEMPDYFVRTLLTIIHAILPPXXXXXXXXXXXXXXXXGQKSSFPALNIGDSKDRVK 492
           NGAEMPDYFVRTLLTIIHAILPP                G+KS FPAL IGDSK+RV+
Sbjct: 61  NGAEMPDYFVRTLLTIIHAILPP-KPKSDDKGMKKDGGDGKKSKFPALGIGDSKERVR 117


>ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like isoform 2 [Vitis vinifera]
          Length = 1175

 Score =  162 bits (411), Expect = 4e-38
 Identities = 84/118 (71%), Positives = 92/118 (77%)
 Frame = +1

Query: 139 MTSQTKEPSLKKLEYLSLVSKVCTELESHLGFGDKVLAEFITEIGRKCETVDEFDKKLKE 318
           M+   +   LKKLEYLSLVSKVCTELE+HLG GDKVLAEFIT++GRKCETVDEFD KLKE
Sbjct: 1   MSVDAQNDGLKKLEYLSLVSKVCTELETHLGVGDKVLAEFITDMGRKCETVDEFDSKLKE 60

Query: 319 NGAEMPDYFVRTLLTIIHAILPPXXXXXXXXXXXXXXXXGQKSSFPALNIGDSKDRVK 492
           NGAEMPDYFVRTLLTIIHAILPP                G+KS FPAL IGDSK+RV+
Sbjct: 61  NGAEMPDYFVRTLLTIIHAILPP-KPKSDDKGMKKDGGDGKKSKFPALGIGDSKERVR 117


>emb|CAN82460.1| hypothetical protein VITISV_005515 [Vitis vinifera]
          Length = 1162

 Score =  160 bits (405), Expect = 2e-37
 Identities = 83/116 (71%), Positives = 90/116 (77%)
 Frame = +1

Query: 139 MTSQTKEPSLKKLEYLSLVSKVCTELESHLGFGDKVLAEFITEIGRKCETVDEFDKKLKE 318
           M+   +   LKKLEYLSLVSKVCTELE+HLG GDKVLAEFIT++GRKCETVDEFD KLKE
Sbjct: 1   MSVDAQNDGLKKLEYLSLVSKVCTELETHLGVGDKVLAEFITDMGRKCETVDEFDSKLKE 60

Query: 319 NGAEMPDYFVRTLLTIIHAILPPXXXXXXXXXXXXXXXXGQKSSFPALNIGDSKDR 486
           NGAEMPDYFVRTLLTIIHAILPP                G+KS FPAL IGDSK+R
Sbjct: 61  NGAEMPDYFVRTLLTIIHAILPP-KPKSDDKGMKKDGGDGKKSKFPALGIGDSKER 115


>ref|XP_002331832.1| predicted protein [Populus trichocarpa] gi|222875070|gb|EEF12201.1|
           predicted protein [Populus trichocarpa]
          Length = 1171

 Score =  156 bits (395), Expect = 3e-36
 Identities = 81/117 (69%), Positives = 90/117 (76%)
 Frame = +1

Query: 142 TSQTKEPSLKKLEYLSLVSKVCTELESHLGFGDKVLAEFITEIGRKCETVDEFDKKLKEN 321
           T+   +  LKKLEYLSLVSKVC+ELE+HLGFGDK+LAEFITE+GR CETVDEFD KLKEN
Sbjct: 3   TAAENDAGLKKLEYLSLVSKVCSELETHLGFGDKILAEFITELGRSCETVDEFDAKLKEN 62

Query: 322 GAEMPDYFVRTLLTIIHAILPPXXXXXXXXXXXXXXXXGQKSSFPALNIGDSKDRVK 492
           GAEMPDYFVRTLLTIIHAILPP                G+ S F AL+I DS+DRVK
Sbjct: 63  GAEMPDYFVRTLLTIIHAILPP-KAEKEVKKDMEGDGSGKDSKFKALSIKDSRDRVK 118


>ref|XP_002318357.1| predicted protein [Populus trichocarpa] gi|222859030|gb|EEE96577.1|
           predicted protein [Populus trichocarpa]
          Length = 1207

 Score =  154 bits (388), Expect = 2e-35
 Identities = 79/112 (70%), Positives = 88/112 (78%)
 Frame = +1

Query: 157 EPSLKKLEYLSLVSKVCTELESHLGFGDKVLAEFITEIGRKCETVDEFDKKLKENGAEMP 336
           +  LKKLEYLSLVSKVC+ELE+HLGFGDK+LAEFITE+GR C+TVDEFD KLKENGAEMP
Sbjct: 8   DAGLKKLEYLSLVSKVCSELETHLGFGDKILAEFITELGRSCDTVDEFDAKLKENGAEMP 67

Query: 337 DYFVRTLLTIIHAILPPXXXXXXXXXXXXXXXXGQKSSFPALNIGDSKDRVK 492
           DYFVRTLLTIIHAILPP                G+ S F AL+I DS+DRVK
Sbjct: 68  DYFVRTLLTIIHAILPP-KAEKEVKKDMEGDGSGKDSKFKALSIQDSRDRVK 118


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