BLASTX nr result

ID: Atractylodes21_contig00004882 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00004882
         (224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004158783.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-pro...   152   2e-35
ref|XP_004135844.1| PREDICTED: pre-mRNA-processing-splicing fact...   152   2e-35
ref|XP_002517654.1| Pre-mRNA-processing-splicing factor, putativ...   152   4e-35
ref|NP_195589.2| Pre-mRNA-processing-splicing factor [Arabidopsi...   151   5e-35
ref|XP_003632761.1| PREDICTED: pre-mRNA-processing-splicing fact...   151   5e-35

>ref|XP_004158783.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-processing-splicing factor
            8-like [Cucumis sativus]
          Length = 2347

 Score =  152 bits (385), Expect = 2e-35
 Identities = 71/74 (95%), Positives = 73/74 (98%)
 Frame = -1

Query: 224  FGSKTDWHVRAISATNLYLRVNHIYVNSEDIKETGYTYIMPKNILKKFICIADLRTQVAG 45
            FGSKTDW VRAISATNLYLRVNHIYVNSEDIKETGYTYIMPKNILKKFICIADLRTQ+AG
Sbjct: 2079 FGSKTDWRVRAISATNLYLRVNHIYVNSEDIKETGYTYIMPKNILKKFICIADLRTQIAG 2138

Query: 44   YLYGVSPPDNPQVK 3
            YLYG+SPPDNPQVK
Sbjct: 2139 YLYGISPPDNPQVK 2152


>ref|XP_004135844.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like [Cucumis
            sativus]
          Length = 2347

 Score =  152 bits (385), Expect = 2e-35
 Identities = 71/74 (95%), Positives = 73/74 (98%)
 Frame = -1

Query: 224  FGSKTDWHVRAISATNLYLRVNHIYVNSEDIKETGYTYIMPKNILKKFICIADLRTQVAG 45
            FGSKTDW VRAISATNLYLRVNHIYVNSEDIKETGYTYIMPKNILKKFICIADLRTQ+AG
Sbjct: 2079 FGSKTDWRVRAISATNLYLRVNHIYVNSEDIKETGYTYIMPKNILKKFICIADLRTQIAG 2138

Query: 44   YLYGVSPPDNPQVK 3
            YLYG+SPPDNPQVK
Sbjct: 2139 YLYGISPPDNPQVK 2152


>ref|XP_002517654.1| Pre-mRNA-processing-splicing factor, putative [Ricinus communis]
            gi|223543286|gb|EEF44818.1| Pre-mRNA-processing-splicing
            factor, putative [Ricinus communis]
          Length = 2376

 Score =  152 bits (383), Expect = 4e-35
 Identities = 70/74 (94%), Positives = 73/74 (98%)
 Frame = -1

Query: 224  FGSKTDWHVRAISATNLYLRVNHIYVNSEDIKETGYTYIMPKNILKKFICIADLRTQVAG 45
            FGSKTDW VRAISATNLYLRVNHIYVNSEDIKETGYTYIMPKNILKKFIC+ADLRTQ+AG
Sbjct: 2108 FGSKTDWRVRAISATNLYLRVNHIYVNSEDIKETGYTYIMPKNILKKFICLADLRTQIAG 2167

Query: 44   YLYGVSPPDNPQVK 3
            YLYG+SPPDNPQVK
Sbjct: 2168 YLYGISPPDNPQVK 2181


>ref|NP_195589.2| Pre-mRNA-processing-splicing factor [Arabidopsis thaliana]
            gi|332661573|gb|AEE86973.1| Pre-mRNA-processing-splicing
            factor [Arabidopsis thaliana]
          Length = 2332

 Score =  151 bits (382), Expect = 5e-35
 Identities = 70/74 (94%), Positives = 73/74 (98%)
 Frame = -1

Query: 224  FGSKTDWHVRAISATNLYLRVNHIYVNSEDIKETGYTYIMPKNILKKFICIADLRTQVAG 45
            FGSKTDW VRAISATNLYLRVNHIYVNS+DIKETGYTYIMPKNILKKFICIADLRTQ+AG
Sbjct: 2066 FGSKTDWRVRAISATNLYLRVNHIYVNSDDIKETGYTYIMPKNILKKFICIADLRTQIAG 2125

Query: 44   YLYGVSPPDNPQVK 3
            YLYG+SPPDNPQVK
Sbjct: 2126 YLYGISPPDNPQVK 2139


>ref|XP_003632761.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like isoform 1
            [Vitis vinifera]
          Length = 2367

 Score =  151 bits (382), Expect = 5e-35
 Identities = 70/74 (94%), Positives = 73/74 (98%)
 Frame = -1

Query: 224  FGSKTDWHVRAISATNLYLRVNHIYVNSEDIKETGYTYIMPKNILKKFICIADLRTQVAG 45
            FGSKTDW VRAISATNLYLRVNHIYVNSEDIKETGYTYIMPKNILKKFICIADLRTQ++G
Sbjct: 2099 FGSKTDWRVRAISATNLYLRVNHIYVNSEDIKETGYTYIMPKNILKKFICIADLRTQISG 2158

Query: 44   YLYGVSPPDNPQVK 3
            YLYG+SPPDNPQVK
Sbjct: 2159 YLYGISPPDNPQVK 2172


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