BLASTX nr result

ID: Atractylodes21_contig00004878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00004878
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282850.1| PREDICTED: poly(U)-specific endoribonuclease...   129   2e-28
ref|XP_002517514.1| Placental protein 11 precursor, putative [Ri...   107   8e-22
emb|CAN62441.1| hypothetical protein VITISV_032501 [Vitis vinifera]   107   1e-21
ref|XP_004147247.1| PREDICTED: poly(U)-specific endoribonuclease...   101   6e-20
gb|ACJ84654.1| unknown [Medicago truncatula]                          100   2e-19

>ref|XP_002282850.1| PREDICTED: poly(U)-specific endoribonuclease-B [Vitis vinifera]
           gi|297742189|emb|CBI33976.3| unnamed protein product
           [Vitis vinifera]
          Length = 444

 Score =  129 bits (325), Expect = 2e-28
 Identities = 61/101 (60%), Positives = 78/101 (77%), Gaps = 4/101 (3%)
 Frame = +1

Query: 1   PSRRPQKAEHDGYE---YSRQDNYNQSHANQLTG-DESNDGWETVGKKPPKRCQKVPTDN 168
           PSRRPQKA H+GYE   Y  Q + NQ++  Q    +ESNDGWETVGKKPP+R QKV  D+
Sbjct: 86  PSRRPQKAVHEGYEKDEYGGQHDNNQNYWKQKEEKEESNDGWETVGKKPPRRPQKVKMDH 145

Query: 169 WNKFKRPSSDQEYSNDVEDDSRMKPSQNELSDLSQACNKLW 291
           WNK+K+P+S QEYS+++ED   ++PS+ EL D+SQACNKLW
Sbjct: 146 WNKYKQPASGQEYSDEIEDGINIEPSEEELDDISQACNKLW 186


>ref|XP_002517514.1| Placental protein 11 precursor, putative [Ricinus communis]
           gi|223543525|gb|EEF45056.1| Placental protein 11
           precursor, putative [Ricinus communis]
          Length = 434

 Score =  107 bits (268), Expect = 8e-22
 Identities = 53/100 (53%), Positives = 65/100 (65%), Gaps = 4/100 (4%)
 Frame = +1

Query: 4   SRRPQKAEHDGYEYSRQDNYNQSHANQLT----GDESNDGWETVGKKPPKRCQKVPTDNW 171
           SRR  K  H+GYE +     +    NQ      G+ SNDGWETVGKK  KR  K+  + W
Sbjct: 77  SRRSTKEVHEGYERNEGHEQHDYDPNQCVRKDEGENSNDGWETVGKKHRKRPHKIQKEQW 136

Query: 172 NKFKRPSSDQEYSNDVEDDSRMKPSQNELSDLSQACNKLW 291
           + +KRP S+QEYS+DVED   + PSQ ELSDLSQACN+LW
Sbjct: 137 HGYKRPPSEQEYSDDVEDGIDLVPSQEELSDLSQACNRLW 176


>emb|CAN62441.1| hypothetical protein VITISV_032501 [Vitis vinifera]
          Length = 492

 Score =  107 bits (266), Expect = 1e-21
 Identities = 61/149 (40%), Positives = 78/149 (52%), Gaps = 52/149 (34%)
 Frame = +1

Query: 1   PSRRPQKAEHDGYE---YSRQDNYNQSHANQLTG-DESNDGWETVGKKPPKRCQK----- 153
           PSRRPQKA H+GYE   Y  Q + NQ++  Q    +ESNDGWETVGKKPP+R QK     
Sbjct: 86  PSRRPQKAVHEGYEKDEYGGQHDNNQNYWKQKEEKEESNDGWETVGKKPPRRPQKILFAL 145

Query: 154 -------------------------------------------VPTDNWNKFKRPSSDQE 204
                                                      V  D+WNK+K+P+S QE
Sbjct: 146 DPKALTALKRVYKPKEISKAFGLRLPFLLHFQFAVLSMVQIVLVKMDHWNKYKQPASGQE 205

Query: 205 YSNDVEDDSRMKPSQNELSDLSQACNKLW 291
           YS+++ED   ++PS+ EL D+SQACNKLW
Sbjct: 206 YSDEIEDGINIEPSEEELDDISQACNKLW 234


>ref|XP_004147247.1| PREDICTED: poly(U)-specific endoribonuclease-B-like [Cucumis
           sativus] gi|449519012|ref|XP_004166529.1| PREDICTED:
           poly(U)-specific endoribonuclease-B-like [Cucumis
           sativus]
          Length = 429

 Score =  101 bits (252), Expect = 6e-20
 Identities = 45/85 (52%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
 Frame = +1

Query: 40  EYSRQDNYNQSH-ANQLTGDESNDGWETVGKKPPKRCQKVPTDNWNKFKRPSSDQEYSND 216
           EY  +  YN++  A + + +E NDGWETV KKP +R  KV TDNW  +KRP+S+Q YS++
Sbjct: 87  EYGSEHGYNRNQWAKEESSEEKNDGWETVHKKPTRRQHKVQTDNWGGYKRPASEQNYSDE 146

Query: 217 VEDDSRMKPSQNELSDLSQACNKLW 291
           VE  + ++PS++EL+DLS ACNKLW
Sbjct: 147 VEVGAELEPSEDELADLSYACNKLW 171


>gb|ACJ84654.1| unknown [Medicago truncatula]
          Length = 224

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 45/94 (47%), Positives = 68/94 (72%)
 Frame = +1

Query: 10  RPQKAEHDGYEYSRQDNYNQSHANQLTGDESNDGWETVGKKPPKRCQKVPTDNWNKFKRP 189
           RPQ+ E++       + +N S+    + + +NDGW+TVGK P ++  KVP DNWN +KRP
Sbjct: 100 RPQQQEYES------ETFNTSNRPNKSDEGNNDGWQTVGK-PSEQTHKVPKDNWNSYKRP 152

Query: 190 SSDQEYSNDVEDDSRMKPSQNELSDLSQACNKLW 291
           + +Q+YSN+VE  SR++PS++EL+DLS+AC KLW
Sbjct: 153 ADEQQYSNEVEVGSRVEPSEDELADLSRACEKLW 186


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