BLASTX nr result

ID: Atractylodes21_contig00004873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00004873
         (940 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275958.1| PREDICTED: translocation protein SEC63 homol...   163   6e-53
ref|XP_003546530.1| PREDICTED: translocation protein SEC63 homol...   163   2e-52
ref|XP_002327614.1| predicted protein [Populus trichocarpa] gi|2...   160   5e-52
ref|XP_004140746.1| PREDICTED: translocation protein SEC63 homol...   155   2e-50
ref|XP_004157217.1| PREDICTED: putative U5 small nuclear ribonuc...   155   2e-50

>ref|XP_002275958.1| PREDICTED: translocation protein SEC63 homolog [Vitis vinifera]
          Length = 688

 Score =  163 bits (413), Expect(2) = 6e-53
 Identities = 89/145 (61%), Positives = 104/145 (71%), Gaps = 9/145 (6%)
 Frame = +3

Query: 42  KVRTLQELRDMTIE--LKLLV-------AVLQKSKM*SVLDMMPSITVEVTCRTXXXXXX 194
           KVRT QEL DM ++   +LL        A +Q  +M  VL+MMPSIT+ VTC T      
Sbjct: 409 KVRTFQELSDMPLQERAELLTQTAGFSSAEIQDVEM--VLEMMPSITIIVTCETEGEEGI 466

Query: 195 XXXXXVLVQAWVTLQRANGLVRAFPHAPYYPFHKEENCWFLLVDLNSNNVWFSQKVSFMD 374
                V VQAWVTL+R NGL+ A PHAPY+PFHKEEN WFLL D  SNNVWFSQK+SFMD
Sbjct: 467 QEGDIVTVQAWVTLKRTNGLIGALPHAPYFPFHKEENFWFLLADPVSNNVWFSQKMSFMD 526

Query: 375 EASDVTAASKAIEETMEGSGANVKE 449
           EA+ +TAASKAIE+TMEGSGA+VKE
Sbjct: 527 EAAAITAASKAIEDTMEGSGASVKE 551



 Score = 71.2 bits (173), Expect(2) = 6e-53
 Identities = 43/82 (52%), Positives = 51/82 (62%), Gaps = 12/82 (14%)
 Frame = +2

Query: 431 GGKCEGTSKAVS------KSGSRLVMGKFQAPAEGNYNLTCYFLYDSWLG*SES-----K 577
           G   + TS AV       K+GSRLVMGK QAPAEGNYNL+C+ L DSW+G  +      K
Sbjct: 546 GASVKETSAAVREAVDKVKAGSRLVMGKLQAPAEGNYNLSCFCLCDSWIGCDKKINLKVK 605

Query: 578 *KS*NGAGTRGG-LTEEGPVLE 640
                 AGTRGG + EEGP+LE
Sbjct: 606 VVKRTRAGTRGGPVAEEGPILE 627


>ref|XP_003546530.1| PREDICTED: translocation protein SEC63 homolog [Glycine max]
          Length = 685

 Score =  163 bits (412), Expect(2) = 2e-52
 Identities = 86/146 (58%), Positives = 102/146 (69%), Gaps = 7/146 (4%)
 Frame = +3

Query: 42  KVRTLQELRDMT----IELKLLVAVLQKSKM*---SVLDMMPSITVEVTCRTXXXXXXXX 200
           KVRT QEL DM      +L +    L  +++    +VLDMMPS+T+EVTC T        
Sbjct: 409 KVRTFQELHDMDSLERADLLIQTGGLSSTEVQDIETVLDMMPSLTLEVTCETEGEEGIQE 468

Query: 201 XXXVLVQAWVTLQRANGLVRAFPHAPYYPFHKEENCWFLLVDLNSNNVWFSQKVSFMDEA 380
              V + AW+ ++R NGL+ A PHAPYYPFHKEEN WFLL D  SNNVWFSQKVSFMDEA
Sbjct: 469 GDIVTLHAWINVKRGNGLIGALPHAPYYPFHKEENYWFLLADSVSNNVWFSQKVSFMDEA 528

Query: 381 SDVTAASKAIEETMEGSGANVKEPVK 458
           + VT+ASKAIEE+MEGSGANVKE  K
Sbjct: 529 AAVTSASKAIEESMEGSGANVKETSK 554



 Score = 69.7 bits (169), Expect(2) = 2e-52
 Identities = 42/82 (51%), Positives = 51/82 (62%), Gaps = 12/82 (14%)
 Frame = +2

Query: 431 GGKCEGTSKAVS------KSGSRLVMGKFQAPAEGNYNLTCYFLYDSWLG*S-----ESK 577
           G   + TSKAV+      K GSRLV+GKFQAP+EGNY+LTCY L DSWLG       + K
Sbjct: 546 GANVKETSKAVAEAVEKVKGGSRLVLGKFQAPSEGNYSLTCYCLCDSWLGCDRRTNLKLK 605

Query: 578 *KS*NGAGTRGG-LTEEGPVLE 640
                 AGTR   L +EGP++E
Sbjct: 606 VLKRTRAGTRAAVLADEGPIME 627


>ref|XP_002327614.1| predicted protein [Populus trichocarpa] gi|222836168|gb|EEE74589.1|
           predicted protein [Populus trichocarpa]
          Length = 685

 Score =  160 bits (406), Expect(2) = 5e-52
 Identities = 86/143 (60%), Positives = 101/143 (70%), Gaps = 7/143 (4%)
 Frame = +3

Query: 42  KVRTLQELRDMTIE--LKLLVAVL-----QKSKM*SVLDMMPSITVEVTCRTXXXXXXXX 200
           KVRT ++ RDMT++   +LL  V      Q   +  VL MMPS+TVEV C T        
Sbjct: 410 KVRTFEDFRDMTLQERAELLEQVAGFSSDQVKDVEMVLGMMPSVTVEVRCETEGEEGIQE 469

Query: 201 XXXVLVQAWVTLQRANGLVRAFPHAPYYPFHKEENCWFLLVDLNSNNVWFSQKVSFMDEA 380
              V +QAW+TL+RANGLV A PHAP +PFHKEEN WFLL D  SNNVWFSQKV+FMDEA
Sbjct: 470 GDIVTIQAWITLKRANGLVGALPHAPNFPFHKEENFWFLLADPVSNNVWFSQKVNFMDEA 529

Query: 381 SDVTAASKAIEETMEGSGANVKE 449
           S + AASKAIE+TMEGSGA+VKE
Sbjct: 530 SAIIAASKAIEDTMEGSGASVKE 552



 Score = 70.9 bits (172), Expect(2) = 5e-52
 Identities = 45/82 (54%), Positives = 50/82 (60%), Gaps = 12/82 (14%)
 Frame = +2

Query: 431 GGKCEGTSKAVS------KSGSRLVMGKFQAPAEGNYNLTCYFLYDSWLG*S-----ESK 577
           G   + TS AV       +SGSRLVMGKF APAEGNYNLTCY L DSW+G       + K
Sbjct: 547 GASVKETSAAVREAVQKVRSGSRLVMGKFPAPAEGNYNLTCYCLCDSWIGCDMKTNLKVK 606

Query: 578 *KS*NGAGTRGGL-TEEGPVLE 640
                 AG+RGGL TEEGP  E
Sbjct: 607 ILKRTRAGSRGGLVTEEGPNAE 628


>ref|XP_004140746.1| PREDICTED: translocation protein SEC63 homolog [Cucumis sativus]
          Length = 685

 Score =  155 bits (393), Expect(2) = 2e-50
 Identities = 74/108 (68%), Positives = 85/108 (78%)
 Frame = +3

Query: 126 SVLDMMPSITVEVTCRTXXXXXXXXXXXVLVQAWVTLQRANGLVRAFPHAPYYPFHKEEN 305
           +VL+MMPS+TV ++C T           V +QAWVTL+R NGLV A PHAPYYPFHKEEN
Sbjct: 444 TVLEMMPSVTVTISCETEGEEGIQEGDTVTIQAWVTLERRNGLVGALPHAPYYPFHKEEN 503

Query: 306 CWFLLVDLNSNNVWFSQKVSFMDEASDVTAASKAIEETMEGSGANVKE 449
            WFLL D NSNNVWF QKVSFMDEA+ +TAASKAIEE MEGSGA+V+E
Sbjct: 504 FWFLLADPNSNNVWFYQKVSFMDEATAITAASKAIEEQMEGSGASVRE 551



 Score = 70.9 bits (172), Expect(2) = 2e-50
 Identities = 44/82 (53%), Positives = 48/82 (58%), Gaps = 12/82 (14%)
 Frame = +2

Query: 431 GGKCEGTSKAVS------KSGSRLVMGKFQAPAEGNYNLTCYFLYDSWLG*SES-----K 577
           G     TS AV       K+GSRLV+GKF APAEGNYNLTCY L DSW+G         K
Sbjct: 546 GASVRETSAAVREAVEKVKAGSRLVLGKFHAPAEGNYNLTCYCLCDSWIGCDNKTNLKLK 605

Query: 578 *KS*NGAGTRGGL-TEEGPVLE 640
                 AGTRG L TEEGP +E
Sbjct: 606 ILKRTRAGTRGSLMTEEGPSME 627


>ref|XP_004157217.1| PREDICTED: putative U5 small nuclear ribonucleoprotein 200 kDa
           helicase-like [Cucumis sativus]
          Length = 477

 Score =  155 bits (393), Expect(2) = 2e-50
 Identities = 74/108 (68%), Positives = 85/108 (78%)
 Frame = +3

Query: 126 SVLDMMPSITVEVTCRTXXXXXXXXXXXVLVQAWVTLQRANGLVRAFPHAPYYPFHKEEN 305
           +VL+MMPS+TV ++C T           V +QAWVTL+R NGLV A PHAPYYPFHKEEN
Sbjct: 236 TVLEMMPSVTVTISCETEGEEGIQEGDTVTIQAWVTLERRNGLVGALPHAPYYPFHKEEN 295

Query: 306 CWFLLVDLNSNNVWFSQKVSFMDEASDVTAASKAIEETMEGSGANVKE 449
            WFLL D NSNNVWF QKVSFMDEA+ +TAASKAIEE MEGSGA+V+E
Sbjct: 296 FWFLLADPNSNNVWFYQKVSFMDEATAITAASKAIEEQMEGSGASVRE 343



 Score = 70.9 bits (172), Expect(2) = 2e-50
 Identities = 44/82 (53%), Positives = 48/82 (58%), Gaps = 12/82 (14%)
 Frame = +2

Query: 431 GGKCEGTSKAVS------KSGSRLVMGKFQAPAEGNYNLTCYFLYDSWLG*SES-----K 577
           G     TS AV       K+GSRLV+GKF APAEGNYNLTCY L DSW+G         K
Sbjct: 338 GASVRETSAAVREAVEKVKAGSRLVLGKFHAPAEGNYNLTCYCLCDSWIGCDNKTNLKLK 397

Query: 578 *KS*NGAGTRGGL-TEEGPVLE 640
                 AGTRG L TEEGP +E
Sbjct: 398 ILKRTRAGTRGSLMTEEGPSME 419


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