BLASTX nr result

ID: Atractylodes21_contig00004871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00004871
         (804 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAY98774.1| hypothetical protein OsI_20708 [Oryza sativa Indi...   227   2e-57
ref|NP_001056116.1| Os05g0528200 [Oryza sativa Japonica Group] g...   224   2e-56
ref|NP_001151809.1| 50S ribosomal protein L20 [Zea mays] gi|2269...   224   2e-56
dbj|BAK05413.1| predicted protein [Hordeum vulgare subsp. vulgare]    223   3e-56
ref|XP_003568051.1| PREDICTED: 50S ribosomal protein L20-like [B...   223   5e-56

>gb|EAY98774.1| hypothetical protein OsI_20708 [Oryza sativa Indica Group]
           gi|222632308|gb|EEE64440.1| hypothetical protein
           OsJ_19285 [Oryza sativa Japonica Group]
          Length = 151

 Score =  227 bits (579), Expect = 2e-57
 Identities = 112/129 (86%), Positives = 121/129 (93%)
 Frame = +1

Query: 157 KGTKMNKKEVFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIERINA 336
           + +KMNK ++FKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIERINA
Sbjct: 27  RNSKMNKGKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIERINA 86

Query: 337 GTRVHGVNYGNFMHGLLKENIQLNRKVLSELSMHEPYSFKALVDVSRTAFPGNRQVPPTP 516
           GTR+HGVNYGNFMHGL+KENIQLNRKVLSELSMHEPYSFKALVDVSRTAFPGNR V    
Sbjct: 87  GTRIHGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDVSRTAFPGNRPV---- 142

Query: 517 KKEGLSILV 543
           KKEGL+ ++
Sbjct: 143 KKEGLASIL 151


>ref|NP_001056116.1| Os05g0528200 [Oryza sativa Japonica Group]
           gi|52353395|gb|AAU43963.1| putative 50S ribosomal
           protein L20 [Oryza sativa Japonica Group]
           gi|113579667|dbj|BAF18030.1| Os05g0528200 [Oryza sativa
           Japonica Group] gi|215693127|dbj|BAG88509.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 121

 Score =  224 bits (571), Expect = 2e-56
 Identities = 111/125 (88%), Positives = 118/125 (94%)
 Frame = +1

Query: 169 MNKKEVFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIERINAGTRV 348
           MNK ++FKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIERINAGTR+
Sbjct: 1   MNKGKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIERINAGTRI 60

Query: 349 HGVNYGNFMHGLLKENIQLNRKVLSELSMHEPYSFKALVDVSRTAFPGNRQVPPTPKKEG 528
           HGVNYGNFMHGL+KENIQLNRKVLSELSMHEPYSFKALVDVSRTAFPGNR V    KKEG
Sbjct: 61  HGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDVSRTAFPGNRPV----KKEG 116

Query: 529 LSILV 543
           L+ ++
Sbjct: 117 LASIL 121


>ref|NP_001151809.1| 50S ribosomal protein L20 [Zea mays]
           gi|226958655|ref|NP_001152923.1| LOC100280565 [Zea mays]
           gi|242091177|ref|XP_002441421.1| hypothetical protein
           SORBIDRAFT_09g026330 [Sorghum bicolor]
           gi|195605838|gb|ACG24749.1| 50S ribosomal protein L20
           [Zea mays] gi|195649829|gb|ACG44382.1| 50S ribosomal
           protein L20 [Zea mays] gi|241946706|gb|EES19851.1|
           hypothetical protein SORBIDRAFT_09g026330 [Sorghum
           bicolor] gi|413949894|gb|AFW82543.1| 50S ribosomal
           protein L20 isoform 1 [Zea mays]
           gi|413949895|gb|AFW82544.1| 50S ribosomal protein L20
           isoform 2 [Zea mays]
          Length = 122

 Score =  224 bits (570), Expect = 2e-56
 Identities = 110/125 (88%), Positives = 117/125 (93%)
 Frame = +1

Query: 169 MNKKEVFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIERINAGTRV 348
           MNK ++FKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIERINAGTR+
Sbjct: 1   MNKGKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIERINAGTRL 60

Query: 349 HGVNYGNFMHGLLKENIQLNRKVLSELSMHEPYSFKALVDVSRTAFPGNRQVPPTPKKEG 528
           HGVNYGNFMHGL+KENIQLNRKVLSELSMHEPYSFKALVDVSR AFPGNR   P P KEG
Sbjct: 61  HGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDVSRNAFPGNR---PVPAKEG 117

Query: 529 LSILV 543
           L+ ++
Sbjct: 118 LASIL 122


>dbj|BAK05413.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 122

 Score =  223 bits (569), Expect = 3e-56
 Identities = 110/125 (88%), Positives = 118/125 (94%)
 Frame = +1

Query: 169 MNKKEVFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIERINAGTRV 348
           MNK ++FKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIERINAGTR+
Sbjct: 1   MNKGKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIERINAGTRL 60

Query: 349 HGVNYGNFMHGLLKENIQLNRKVLSELSMHEPYSFKALVDVSRTAFPGNRQVPPTPKKEG 528
           HGVNYGNFMHGL+KENIQLNRKVLSELSMHEPYSFKALVDVSRTAFPGNR   P  +KEG
Sbjct: 61  HGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDVSRTAFPGNR---PPAQKEG 117

Query: 529 LSILV 543
           L+ ++
Sbjct: 118 LAAIL 122


>ref|XP_003568051.1| PREDICTED: 50S ribosomal protein L20-like [Brachypodium distachyon]
          Length = 121

 Score =  223 bits (567), Expect = 5e-56
 Identities = 110/125 (88%), Positives = 118/125 (94%)
 Frame = +1

Query: 169 MNKKEVFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIERINAGTRV 348
           MNK ++FKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIERINAGTR+
Sbjct: 1   MNKGKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIERINAGTRL 60

Query: 349 HGVNYGNFMHGLLKENIQLNRKVLSELSMHEPYSFKALVDVSRTAFPGNRQVPPTPKKEG 528
           HGVNYGNFMHGL+KEN+QLNRKVLSELSMHEPYSFKALVDVSRTAFPGNR V    KKEG
Sbjct: 61  HGVNYGNFMHGLVKENVQLNRKVLSELSMHEPYSFKALVDVSRTAFPGNRPV----KKEG 116

Query: 529 LSILV 543
           L+ ++
Sbjct: 117 LASIL 121


Top