BLASTX nr result

ID: Atractylodes21_contig00004823 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00004823
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509457.1| 30S ribosomal protein S5, putative [Ricinus ...   126   2e-27
ref|XP_002305129.1| predicted protein [Populus trichocarpa] gi|1...   125   5e-27
ref|XP_004134699.1| PREDICTED: 30S ribosomal protein S5, chlorop...   124   6e-27
ref|XP_002881306.1| ribosomal protein S5 family protein [Arabido...   124   6e-27
ref|NP_180936.1| 30S ribosomal protein S5 [Arabidopsis thaliana]...   124   6e-27

>ref|XP_002509457.1| 30S ribosomal protein S5, putative [Ricinus communis]
           gi|223549356|gb|EEF50844.1| 30S ribosomal protein S5,
           putative [Ricinus communis]
          Length = 309

 Score =  126 bits (316), Expect = 2e-27
 Identities = 63/67 (94%), Positives = 66/67 (98%)
 Frame = +3

Query: 3   SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQQMRQFSEVARERGI 182
           SPGTGVIAGGAVRIVLEMAGVENALGKQ+GS NALNNARATVVAVQ+MRQFS+VARERGI
Sbjct: 243 SPGTGVIAGGAVRIVLEMAGVENALGKQIGSKNALNNARATVVAVQKMRQFSDVARERGI 302

Query: 183 PMEELWK 203
           PMEELWK
Sbjct: 303 PMEELWK 309


>ref|XP_002305129.1| predicted protein [Populus trichocarpa] gi|118487850|gb|ABK95748.1|
           unknown [Populus trichocarpa]
           gi|222848093|gb|EEE85640.1| predicted protein [Populus
           trichocarpa]
          Length = 311

 Score =  125 bits (313), Expect = 5e-27
 Identities = 64/67 (95%), Positives = 65/67 (97%)
 Frame = +3

Query: 3   SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQQMRQFSEVARERGI 182
           SPGTGVIAGGAVRIVLEMAGVENALGKQL S NALNNARATVVAVQ+MRQFSEVARERGI
Sbjct: 245 SPGTGVIAGGAVRIVLEMAGVENALGKQLRSKNALNNARATVVAVQKMRQFSEVARERGI 304

Query: 183 PMEELWK 203
           PMEELWK
Sbjct: 305 PMEELWK 311


>ref|XP_004134699.1| PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Cucumis
           sativus] gi|449479289|ref|XP_004155560.1| PREDICTED: 30S
           ribosomal protein S5, chloroplastic-like [Cucumis
           sativus]
          Length = 307

 Score =  124 bits (312), Expect = 6e-27
 Identities = 62/67 (92%), Positives = 66/67 (98%)
 Frame = +3

Query: 3   SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQQMRQFSEVARERGI 182
           SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQ+M+QF +VA+ERGI
Sbjct: 241 SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGI 300

Query: 183 PMEELWK 203
           PMEELWK
Sbjct: 301 PMEELWK 307


>ref|XP_002881306.1| ribosomal protein S5 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297327145|gb|EFH57565.1| ribosomal protein S5
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 304

 Score =  124 bits (312), Expect = 6e-27
 Identities = 62/67 (92%), Positives = 65/67 (97%)
 Frame = +3

Query: 3   SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQQMRQFSEVARERGI 182
           SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARAT+ AVQQMRQF +VA+ERGI
Sbjct: 238 SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATLAAVQQMRQFRDVAQERGI 297

Query: 183 PMEELWK 203
           PMEELWK
Sbjct: 298 PMEELWK 304


>ref|NP_180936.1| 30S ribosomal protein S5 [Arabidopsis thaliana]
           gi|75101015|sp|P93014.1|RR5_ARATH RecName: Full=30S
           ribosomal protein S5, chloroplastic; Flags: Precursor
           gi|1707008|gb|AAC69132.1| 30S ribosomal protein S5
           [Arabidopsis thaliana] gi|15450886|gb|AAK96714.1| 30S
           ribosomal protein S5 [Arabidopsis thaliana]
           gi|20259882|gb|AAM13288.1| 30S ribosomal protein S5
           [Arabidopsis thaliana] gi|21593322|gb|AAM65271.1| 30S
           ribosomal protein S5 [Arabidopsis thaliana]
           gi|330253794|gb|AEC08888.1| 30S ribosomal protein S5
           [Arabidopsis thaliana]
          Length = 303

 Score =  124 bits (312), Expect = 6e-27
 Identities = 62/67 (92%), Positives = 65/67 (97%)
 Frame = +3

Query: 3   SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQQMRQFSEVARERGI 182
           SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARAT+ AVQQMRQF +VA+ERGI
Sbjct: 237 SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATLAAVQQMRQFRDVAQERGI 296

Query: 183 PMEELWK 203
           PMEELWK
Sbjct: 297 PMEELWK 303


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