BLASTX nr result

ID: Atractylodes21_contig00004737 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00004737
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273052.1| PREDICTED: zinc finger CCCH domain-containin...   119   3e-25
gb|ADG58077.1| transcription factor [Lycoris longituba]               111   5e-23
ref|XP_004149023.1| PREDICTED: zinc finger CCCH domain-containin...   104   8e-21
ref|XP_002533457.1| conserved hypothetical protein [Ricinus comm...   104   8e-21
ref|XP_002299153.1| predicted protein [Populus trichocarpa] gi|2...   104   8e-21

>ref|XP_002273052.1| PREDICTED: zinc finger CCCH domain-containing protein 14 [Vitis
           vinifera] gi|147768909|emb|CAN75883.1| hypothetical
           protein VITISV_024456 [Vitis vinifera]
          Length = 296

 Score =  119 bits (298), Expect = 3e-25
 Identities = 66/127 (51%), Positives = 81/127 (63%), Gaps = 6/127 (4%)
 Frame = -1

Query: 365 HYVPGGYNAANRLTDMSG----PPGRKAQMQQQPFTDGPAPVKNKLCNKINTPEGCKFGN 198
           HYVPGGY+A  ++T++ G    PP  +  M      DGP  VK ++CNK NTPEGCKFG+
Sbjct: 61  HYVPGGYSAVTQMTNLGGNPAMPPIARNPMAPPTIPDGPPTVKTRICNKFNTPEGCKFGD 120

Query: 197 KCRFAHSEAEIGGRSSYGAYENPHAQPGPMNYRGGYQGRFEA--PAHAPASNFGQSATAK 24
           KC FAH E E+ GR     +E+P A  GPM   G   GR EA  P  A A++FG SATAK
Sbjct: 121 KCHFAHGELEL-GRPIVPTHEDPRAM-GPMG--GRLAGRLEAPPPGLAAAASFGASATAK 176

Query: 23  ISIDASL 3
           IS+DASL
Sbjct: 177 ISVDASL 183


>gb|ADG58077.1| transcription factor [Lycoris longituba]
          Length = 307

 Score =  111 bits (278), Expect = 5e-23
 Identities = 60/129 (46%), Positives = 73/129 (56%), Gaps = 8/129 (6%)
 Frame = -1

Query: 365 HYVPGGYNAANRLTDMSGPP-------GRKAQMQQQPFTDGPAP-VKNKLCNKINTPEGC 210
           H+VPGGYNA  ++T+M  P        G        P   GP P VK K+CNK N+ EGC
Sbjct: 57  HFVPGGYNAVAQMTNMGNPTHAPPPPRGPMGPPPAMPDPHGPPPAVKTKMCNKFNSAEGC 116

Query: 209 KFGNKCRFAHSEAEIGGRSSYGAYENPHAQPGPMNYRGGYQGRFEAPAHAPASNFGQSAT 30
           KFG+KC FAH E E+G R    + + P   P PM   G    RFE P   P + FG SAT
Sbjct: 117 KFGDKCNFAHGEGELGKR-IIPSRDGPMGGPPPMGAAGRMGNRFEPPPPVPPTTFGASAT 175

Query: 29  AKISIDASL 3
           AKIS+D+SL
Sbjct: 176 AKISVDSSL 184


>ref|XP_004149023.1| PREDICTED: zinc finger CCCH domain-containing protein 14-like
           [Cucumis sativus] gi|449502203|ref|XP_004161573.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           14-like [Cucumis sativus]
          Length = 308

 Score =  104 bits (259), Expect = 8e-21
 Identities = 56/125 (44%), Positives = 75/125 (60%), Gaps = 4/125 (3%)
 Frame = -1

Query: 365 HYVPGGYNAANRLTDMSGPPGRKAQMQQQPFTDG-PAPVKNKLCNKINTPEGCKFGNKCR 189
           HYVPGG  + +++   + PPG +     Q F DG P  VK +LCNK N+ EGC+FG+KC 
Sbjct: 62  HYVPGGVKSISQMISPALPPGIRNPAPPQSFPDGVPPAVKTRLCNKFNSAEGCRFGDKCY 121

Query: 188 FAHSEAEIGGRSSYGAYENPHAQPGPM---NYRGGYQGRFEAPAHAPASNFGQSATAKIS 18
           +AH E E+G  +     ++    PGPM      GG+      P H PA++FG SATAKIS
Sbjct: 122 YAHGEWELGRPNP--PQDHGGMGPGPMQQPRMGGGWNAPPPPPNHGPAASFGASATAKIS 179

Query: 17  IDASL 3
           +DASL
Sbjct: 180 VDASL 184


>ref|XP_002533457.1| conserved hypothetical protein [Ricinus communis]
           gi|223526690|gb|EEF28926.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 295

 Score =  104 bits (259), Expect = 8e-21
 Identities = 57/126 (45%), Positives = 77/126 (61%), Gaps = 5/126 (3%)
 Frame = -1

Query: 365 HYVPGGYNAANRLTDM-----SGPPGRKAQMQQQPFTDGPAPVKNKLCNKINTPEGCKFG 201
           HYVPGGYNA  ++ ++     S P    A     P    P+ VK+++CNK NT EGCKFG
Sbjct: 58  HYVPGGYNAVAQMMNLGPAVTSVPRNMPAPSPAIPNGSAPSAVKSRMCNKYNTVEGCKFG 117

Query: 200 NKCRFAHSEAEIGGRSSYGAYENPHAQPGPMNYRGGYQGRFEAPAHAPASNFGQSATAKI 21
           +KC FAH E E+ G+S   ++++P A      + G   GR E P   PA++FG SATAKI
Sbjct: 118 DKCNFAHGEWEL-GKSMAPSHDDPRAFG---TFAGRMGGRMEPPPPGPAASFGASATAKI 173

Query: 20  SIDASL 3
           S++ASL
Sbjct: 174 SVEASL 179


>ref|XP_002299153.1| predicted protein [Populus trichocarpa] gi|222846411|gb|EEE83958.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score =  104 bits (259), Expect = 8e-21
 Identities = 56/128 (43%), Positives = 73/128 (57%), Gaps = 7/128 (5%)
 Frame = -1

Query: 365 HYVPGGYNAANRLTDMSGPPGRKAQMQQQPFT-------DGPAPVKNKLCNKINTPEGCK 207
           HYVPGG+ A +++ ++ G P      + Q            P  VK++LCNK NT EGCK
Sbjct: 63  HYVPGGFKAVSQMLNVGGSPALPPASRNQGVPTLSYQDRSSPPSVKSRLCNKYNTVEGCK 122

Query: 206 FGNKCRFAHSEAEIGGRSSYGAYENPHAQPGPMNYRGGYQGRFEAPAHAPASNFGQSATA 27
           FG+KC FAH E E+G  S+  +YE+P A  GP+  R           H  A++FG SAT 
Sbjct: 123 FGDKCHFAHGEWELGKASAAPSYEDPRAM-GPIPGRMSRHMEHPHQGHGAAASFGSSATT 181

Query: 26  KISIDASL 3
           KISIDASL
Sbjct: 182 KISIDASL 189


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