BLASTX nr result

ID: Atractylodes21_contig00004669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00004669
         (1662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272685.1| PREDICTED: pre-mRNA-processing factor 39-lik...   277   e-125
emb|CBI37185.3| unnamed protein product [Vitis vinifera]              277   e-125
ref|XP_002526546.1| Pre-mRNA-processing protein prp39, putative ...   273   e-118
ref|XP_002303113.1| predicted protein [Populus trichocarpa] gi|2...   256   e-112
ref|XP_003625373.1| Pre-mRNA-processing factor [Medicago truncat...   259   e-111

>ref|XP_002272685.1| PREDICTED: pre-mRNA-processing factor 39-like [Vitis vinifera]
          Length = 832

 Score =  277 bits (709), Expect(2) = e-125
 Identities = 140/166 (84%), Positives = 148/166 (89%)
 Frame = -3

Query: 1660 VVKLYERCLIACANYPEYWRRYILSMEASGSMDLAENALARATQVFVKRQPEIHLFAARF 1481
            VVKLYERCLIACANYPEYW RY+L MEASGSMDLA NALARATQVFVKRQPEIHLFAARF
Sbjct: 443  VVKLYERCLIACANYPEYWIRYVLCMEASGSMDLANNALARATQVFVKRQPEIHLFAARF 502

Query: 1480 REHGGDIAGARASYQLVHTEISPGLFEAIVNHANMEHRLGNLEEACSLYEQTIAIEKGKE 1301
            RE  GDI G+RA+YQLVHTEISPGL EAI+ HANMEHRLGNLE+A SLYEQ IAIEKGKE
Sbjct: 503  REQKGDIPGSRAAYQLVHTEISPGLLEAIIKHANMEHRLGNLEDAFSLYEQAIAIEKGKE 562

Query: 1300 QSQTLPLLFAQYSRFLYLVLRRVEKAREVLDQALESNQLSKPLLEA 1163
             SQTLP+LFAQYSRFLYLV    EKARE+L +ALE  QLSKPLLEA
Sbjct: 563  HSQTLPMLFAQYSRFLYLVTGNTEKAREILVEALEHVQLSKPLLEA 608



 Score =  199 bits (506), Expect(2) = e-125
 Identities = 99/143 (69%), Positives = 112/143 (78%), Gaps = 3/143 (2%)
 Frame = -1

Query: 1056 VEKFIAPGPDNPNPASYVEREELSSIFLEFLDLFGDIQSIKKADNRHAKLFLHHKSASES 877
            V+KFI   P++PN AS  EREELSSIFLEFLDLFGD QSIKKAD+RHAKLFLHH+S SE 
Sbjct: 629  VDKFIHTNPESPNAASAAEREELSSIFLEFLDLFGDAQSIKKADDRHAKLFLHHRSTSEL 688

Query: 876  KKRHMEGYLVSDRTKLAK--TGAVSPAPS-MGTYQGTQNQWPAGYGVQAQSWPQATQAQG 706
            KKRH E +L SD+ KLAK  +G  SPA S MG Y   QNQW +GYG+Q Q+WPQATQAQG
Sbjct: 689  KKRHAEDFLASDKAKLAKSYSGVPSPAQSLMGAYPSAQNQWASGYGLQPQAWPQATQAQG 748

Query: 705  QQWPSTYTQQAAYGTYNAYGSTY 637
            QQW   YTQQAAY  Y+ YGS+Y
Sbjct: 749  QQWNPGYTQQAAYNAYSGYGSSY 771


>emb|CBI37185.3| unnamed protein product [Vitis vinifera]
          Length = 432

 Score =  277 bits (709), Expect(2) = e-125
 Identities = 140/166 (84%), Positives = 148/166 (89%)
 Frame = -3

Query: 1660 VVKLYERCLIACANYPEYWRRYILSMEASGSMDLAENALARATQVFVKRQPEIHLFAARF 1481
            VVKLYERCLIACANYPEYW RY+L MEASGSMDLA NALARATQVFVKRQPEIHLFAARF
Sbjct: 43   VVKLYERCLIACANYPEYWIRYVLCMEASGSMDLANNALARATQVFVKRQPEIHLFAARF 102

Query: 1480 REHGGDIAGARASYQLVHTEISPGLFEAIVNHANMEHRLGNLEEACSLYEQTIAIEKGKE 1301
            RE  GDI G+RA+YQLVHTEISPGL EAI+ HANMEHRLGNLE+A SLYEQ IAIEKGKE
Sbjct: 103  REQKGDIPGSRAAYQLVHTEISPGLLEAIIKHANMEHRLGNLEDAFSLYEQAIAIEKGKE 162

Query: 1300 QSQTLPLLFAQYSRFLYLVLRRVEKAREVLDQALESNQLSKPLLEA 1163
             SQTLP+LFAQYSRFLYLV    EKARE+L +ALE  QLSKPLLEA
Sbjct: 163  HSQTLPMLFAQYSRFLYLVTGNTEKAREILVEALEHVQLSKPLLEA 208



 Score =  199 bits (506), Expect(2) = e-125
 Identities = 99/143 (69%), Positives = 112/143 (78%), Gaps = 3/143 (2%)
 Frame = -1

Query: 1056 VEKFIAPGPDNPNPASYVEREELSSIFLEFLDLFGDIQSIKKADNRHAKLFLHHKSASES 877
            V+KFI   P++PN AS  EREELSSIFLEFLDLFGD QSIKKAD+RHAKLFLHH+S SE 
Sbjct: 229  VDKFIHTNPESPNAASAAEREELSSIFLEFLDLFGDAQSIKKADDRHAKLFLHHRSTSEL 288

Query: 876  KKRHMEGYLVSDRTKLAK--TGAVSPAPS-MGTYQGTQNQWPAGYGVQAQSWPQATQAQG 706
            KKRH E +L SD+ KLAK  +G  SPA S MG Y   QNQW +GYG+Q Q+WPQATQAQG
Sbjct: 289  KKRHAEDFLASDKAKLAKSYSGVPSPAQSLMGAYPSAQNQWASGYGLQPQAWPQATQAQG 348

Query: 705  QQWPSTYTQQAAYGTYNAYGSTY 637
            QQW   YTQQAAY  Y+ YGS+Y
Sbjct: 349  QQWNPGYTQQAAYNAYSGYGSSY 371


>ref|XP_002526546.1| Pre-mRNA-processing protein prp39, putative [Ricinus communis]
            gi|223534107|gb|EEF35824.1| Pre-mRNA-processing protein
            prp39, putative [Ricinus communis]
          Length = 829

 Score =  273 bits (699), Expect(2) = e-118
 Identities = 134/166 (80%), Positives = 149/166 (89%)
 Frame = -3

Query: 1660 VVKLYERCLIACANYPEYWRRYILSMEASGSMDLAENALARATQVFVKRQPEIHLFAARF 1481
            VVKL+ERCLIACANYPEYW RY L MEASGSMDLA NALARATQVFVKR+PEIHLFAARF
Sbjct: 441  VVKLFERCLIACANYPEYWIRYTLCMEASGSMDLASNALARATQVFVKRRPEIHLFAARF 500

Query: 1480 REHGGDIAGARASYQLVHTEISPGLFEAIVNHANMEHRLGNLEEACSLYEQTIAIEKGKE 1301
            RE  GD+ GARA+YQLVHTEI+PGLFEA+V HANMEHRLGNL++ACSLYEQ IAIEKGKE
Sbjct: 501  REQNGDVPGARAAYQLVHTEIAPGLFEAVVKHANMEHRLGNLKDACSLYEQAIAIEKGKE 560

Query: 1300 QSQTLPLLFAQYSRFLYLVLRRVEKAREVLDQALESNQLSKPLLEA 1163
             SQ LP+L+AQY+RFLYLV   + KARE+L +ALE+ QLSKPLLEA
Sbjct: 561  HSQVLPMLYAQYTRFLYLVSGNINKAREILVEALENVQLSKPLLEA 606



 Score =  178 bits (452), Expect(2) = e-118
 Identities = 88/143 (61%), Positives = 105/143 (73%), Gaps = 3/143 (2%)
 Frame = -1

Query: 1056 VEKFIAPGPDNPNPASYVEREELSSIFLEFLDLFGDIQSIKKADNRHAKLFLHHKSASES 877
            V+KF+ P  D+ + AS  +REELS IFLEFL +FGD QSIKKAD+RHAKLFL H+S SE 
Sbjct: 627  VDKFVMPNSDSLSAASATDREELSCIFLEFLGMFGDAQSIKKADDRHAKLFLPHRSKSEF 686

Query: 876  KKRHMEGYLVSDRTKLAKTGAVSPAP---SMGTYQGTQNQWPAGYGVQAQSWPQATQAQG 706
            KKRH + YL SD++K+AK    +P+P    MG Y  TQNQW AGYGVQ Q+WP ATQAQ 
Sbjct: 687  KKRHADDYLTSDKSKIAKAYGDAPSPVQSLMGAYPSTQNQWAAGYGVQPQAWPPATQAQM 746

Query: 705  QQWPSTYTQQAAYGTYNAYGSTY 637
            QQW   Y QQAAY TY +Y S+Y
Sbjct: 747  QQWTPGYGQQAAYSTYGSYASSY 769


>ref|XP_002303113.1| predicted protein [Populus trichocarpa] gi|222844839|gb|EEE82386.1|
            predicted protein [Populus trichocarpa]
          Length = 878

 Score =  256 bits (653), Expect(2) = e-112
 Identities = 124/166 (74%), Positives = 143/166 (86%)
 Frame = -3

Query: 1660 VVKLYERCLIACANYPEYWRRYILSMEASGSMDLAENALARATQVFVKRQPEIHLFAARF 1481
            VVKLYERC+IACANY EYW RY+L MEA+G+MDLA NALARATQVFVKRQPEIH+FAAR 
Sbjct: 490  VVKLYERCVIACANYTEYWIRYVLCMEATGNMDLANNALARATQVFVKRQPEIHIFAARL 549

Query: 1480 REHGGDIAGARASYQLVHTEISPGLFEAIVNHANMEHRLGNLEEACSLYEQTIAIEKGKE 1301
            +E  GD++GARA+YQ+VH EI+PGL EAI+ HANMEHRLGNLE+A SLYEQ IAIEKGKE
Sbjct: 550  KEQNGDVSGARAAYQVVHAEIAPGLLEAIIKHANMEHRLGNLEDAFSLYEQAIAIEKGKE 609

Query: 1300 QSQTLPLLFAQYSRFLYLVLRRVEKAREVLDQALESNQLSKPLLEA 1163
             SQ LP L+AQY+RF+YL    VEKARE+L + LE+ Q SKPLLEA
Sbjct: 610  HSQVLPALYAQYARFVYLASNNVEKAREILLEGLENAQYSKPLLEA 655



 Score =  177 bits (450), Expect(2) = e-112
 Identities = 91/143 (63%), Positives = 101/143 (70%), Gaps = 3/143 (2%)
 Frame = -1

Query: 1056 VEKFIAPGPDNPNPASYVEREELSSIFLEFLDLFGDIQSIKKADNRHAKLFLHHKSASES 877
            V+KFI P  D+ N AS  EREELS IFLEFL +FGD QSIKKA +RHAK FL H+S SE 
Sbjct: 676  VDKFILPSSDSVNAASAAEREELSCIFLEFLGIFGDAQSIKKAADRHAKFFLPHRSKSEL 735

Query: 876  KKRHMEGYLVSDRTKLAK--TGAVSPAPS-MGTYQGTQNQWPAGYGVQAQSWPQATQAQG 706
            KKRH E YL SD+ K+AK    A SPA S MG Y   QNQW AGYGVQ Q+WP ATQ Q 
Sbjct: 736  KKRHAEDYLASDKAKMAKPYPDATSPAQSLMGAYASAQNQWTAGYGVQPQAWPPATQVQT 795

Query: 705  QQWPSTYTQQAAYGTYNAYGSTY 637
            QQW   Y QQAAYG Y+ YG +Y
Sbjct: 796  QQWAPGYNQQAAYGAYSGYGGSY 818


>ref|XP_003625373.1| Pre-mRNA-processing factor [Medicago truncatula]
            gi|355500388|gb|AES81591.1| Pre-mRNA-processing factor
            [Medicago truncatula]
          Length = 838

 Score =  259 bits (662), Expect(2) = e-111
 Identities = 129/166 (77%), Positives = 141/166 (84%)
 Frame = -3

Query: 1660 VVKLYERCLIACANYPEYWRRYILSMEASGSMDLAENALARATQVFVKRQPEIHLFAARF 1481
            +VKLYERC+IACANYPEYW RY+L MEAS SMDLA N LARA+QVFVKRQPEIHLF ARF
Sbjct: 451  IVKLYERCVIACANYPEYWIRYVLCMEASESMDLANNVLARASQVFVKRQPEIHLFCARF 510

Query: 1480 REHGGDIAGARASYQLVHTEISPGLFEAIVNHANMEHRLGNLEEACSLYEQTIAIEKGKE 1301
            +E  GDI GARA+YQLVHTEISPGL EAI+ HANMEHRLG LE+A SLYEQ IAIEKGKE
Sbjct: 511  KEQAGDIVGARAAYQLVHTEISPGLLEAIIRHANMEHRLGKLEDAFSLYEQAIAIEKGKE 570

Query: 1300 QSQTLPLLFAQYSRFLYLVLRRVEKAREVLDQALESNQLSKPLLEA 1163
             SQTLP+LFAQYSRF+YL     EKARE+L   LE+  LSKPLLEA
Sbjct: 571  HSQTLPMLFAQYSRFVYLASGNSEKAREILVGGLENASLSKPLLEA 616



 Score =  171 bits (433), Expect(2) = e-111
 Identities = 88/145 (60%), Positives = 106/145 (73%), Gaps = 5/145 (3%)
 Frame = -1

Query: 1056 VEKFIAPGPDNPNPASYVEREELSSIFLEFLDLFGDIQSIKKADNRHAKLFLHHKSASES 877
            V KFI P P+NP  AS  EREELS+IFLEFL+LFGD+QSIK+A++RHAKLFL ++  SE 
Sbjct: 639  VVKFITPNPENPGVASATEREELSNIFLEFLNLFGDVQSIKRAEDRHAKLFLPNRGLSEL 698

Query: 876  KKRHMEGYLVSDRTKLAKT-GAVSPAPSM-GTYQGTQNQWPAGYGVQAQSWPQATQAQGQ 703
            KKRH E +L SD+TK+++   A SPA S+ G Y    NQWP  YGVQ Q+WP  TQAQGQ
Sbjct: 699  KKRHAEDFLASDKTKVSRAYSAQSPAQSVAGAYPNGPNQWP-NYGVQPQTWPATTQAQGQ 757

Query: 702  QWPSTYTQQ---AAYGTYNAYGSTY 637
            QWP+ YTQQ   A+YG Y  YG  Y
Sbjct: 758  QWPAGYTQQQAAASYGAYAGYGGNY 782


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