BLASTX nr result

ID: Atractylodes21_contig00004610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00004610
         (1656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37506.3| unnamed protein product [Vitis vinifera]              447   e-135
ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcr...   447   e-133
ref|XP_003547884.1| PREDICTED: RNA polymerase I-specific transcr...   395   e-120
ref|XP_003534228.1| PREDICTED: RNA polymerase I-specific transcr...   390   e-118
ref|XP_004155826.1| PREDICTED: RNA polymerase I-specific transcr...   388   e-114

>emb|CBI37506.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score =  447 bits (1149), Expect(2) = e-135
 Identities = 233/383 (60%), Positives = 280/383 (73%)
 Frame = -2

Query: 1400 NRLIDLDVEIGWDEILQDDPSKGIFEMEVEDMARPVDETEIDMIEPVREYSGRKVLWGNV 1221
            +RL+DLDVEI W+E+LQDD SKGIFEME+EDM  P D+ E D  E  R    RK L GN+
Sbjct: 224  DRLVDLDVEIAWEEVLQDDCSKGIFEMELEDMEEPADDVENDGGELHRGSLSRKSLGGNL 283

Query: 1220 VAQKLDTLMVLTFDHLESCFKSGRLVQVFETLLQSFQSTVLNAYKSKFAQFVMFYACSLD 1041
            +A+KLD+LMVLTF+HLESC   GRL++VFETL+ SFQ+TVLNA+KSKFAQFVMFYAC+LD
Sbjct: 284  IAEKLDSLMVLTFEHLESCEAGGRLIEVFETLVLSFQTTVLNAFKSKFAQFVMFYACALD 343

Query: 1040 PEDCGTQFVSRLIDIFKSKVYPQDWRMSAVAYLASYLSRAKFLSASYVTIVLESLVDWCH 861
            PE+CG +F   L D F    +P   RMSAVAYLASYLSR KFL+AS+V  +LE LV WC 
Sbjct: 344  PENCGVRFARVLADFFVCSTFPPLNRMSAVAYLASYLSRGKFLTASFVANILERLVVWCL 403

Query: 860  LYCENQIGEIYPKHHRVFYAGCQGIMYVLCFRMRSILANPRLKSQLVDMPLEQILKHPLN 681
             YC+   G+I PK H+VFY+GCQ IMYVLCFRMRS++  P L+SQL+ +PLE ILKHPL+
Sbjct: 404  EYCKIHDGDINPKAHQVFYSGCQAIMYVLCFRMRSMMNVPHLRSQLLLLPLETILKHPLS 463

Query: 680  PLEVCLPSIVDEFLRQAKAARLFRVSGTFIFHDQLESEQSRAFGGFERXXXXXXXXXXXL 501
            PL+VCLPSIV+EFLRQAKAARLF VS TFIF D LESE SRAFGG ER           L
Sbjct: 464  PLKVCLPSIVEEFLRQAKAARLFTVSETFIFSDLLESELSRAFGGIERLDMFFPFDPCLL 523

Query: 500  KKSDRFIRPNFIYWSMVRTTYXXXXXXXXXXXXXXDGASNGRGPMSFEDDEFDMNLSKMS 321
            KK DRFIRPNF+YWSM+RTTY                AS+         D+FD +++KMS
Sbjct: 524  KKCDRFIRPNFVYWSMIRTTYDDGEDSSDEEPAEDYEASH--------PDDFDHSMNKMS 575

Query: 320  ITPRNSFMFGNEEHRRMQMPSRI 252
            ITP+NS  +   +  ++QMPSRI
Sbjct: 576  ITPKNSLYYRFGDELKVQMPSRI 598



 Score = 63.9 bits (154), Expect(2) = e-135
 Identities = 32/45 (71%), Positives = 36/45 (80%)
 Frame = -3

Query: 1654 KGIADLVPLAPSRLEQIVRERVPNVFAKEAQIVVYVENMLMLESG 1520
            K IADLVPLAPSRL  IV +R+PNVF KE  I++YVENML LE G
Sbjct: 164  KDIADLVPLAPSRLVPIVIQRMPNVFTKEPLIMIYVENMLRLEGG 208


>ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Vitis vinifera]
          Length = 636

 Score =  447 bits (1149), Expect(2) = e-133
 Identities = 236/395 (59%), Positives = 283/395 (71%), Gaps = 12/395 (3%)
 Frame = -2

Query: 1400 NRLIDLDVEIGWDEILQDDPSKGIFEMEVEDMARPVDETEIDMIEPVREYSGRKVLWGNV 1221
            +RL+DLDVEI W+E+LQDD SKGIFEME+EDM  P D+ E D  E  R    RK L GN+
Sbjct: 233  DRLVDLDVEIAWEEVLQDDCSKGIFEMELEDMEEPADDVENDGGELHRGSLSRKSLGGNL 292

Query: 1220 VAQKLDTLMVLTFDHLESCFKSGRLVQVFETLLQSFQSTVLNAYKSKFAQFVMFYACSLD 1041
            +A+KLD+LMVLTF+HLESC   GRL++VFETL+ SFQ+TVLNA+KSKFAQFVMFYAC+LD
Sbjct: 293  IAEKLDSLMVLTFEHLESCEAGGRLIEVFETLVLSFQTTVLNAFKSKFAQFVMFYACALD 352

Query: 1040 PEDCGTQFVSRLIDIFKSKVYPQDWRMSAVAYLASYLSRAKFLSASYVTIVLESLVDWCH 861
            PE+CG +F   L D F    +P   RMSAVAYLASYLSR KFL+AS+V  +LE LV WC 
Sbjct: 353  PENCGVRFARVLADFFVCSTFPPLNRMSAVAYLASYLSRGKFLTASFVANILERLVVWCL 412

Query: 860  LYCENQIGEIYPKHHRVFYAGCQGIMYVLCFRMRSILANPRLKSQLVDMPLEQILKHPLN 681
             YC+   G+I PK H+VFY+GCQ IMYVLCFRMRS++  P L+SQL+ +PLE ILKHPL+
Sbjct: 413  EYCKIHDGDINPKAHQVFYSGCQAIMYVLCFRMRSMMNVPHLRSQLLLLPLETILKHPLS 472

Query: 680  PLEVCLPSIVDEFLRQAKAARLFRVSGTFIFHDQLESEQSRAFGGFERXXXXXXXXXXXL 501
            PL+VCLPSIV+EFLRQAKAARLF VS TFIF D LESE SRAFGG ER           L
Sbjct: 473  PLKVCLPSIVEEFLRQAKAARLFTVSETFIFSDLLESELSRAFGGIERLDMFFPFDPCLL 532

Query: 500  KKSDRFIRPNFIYWSMVRTTYXXXXXXXXXXXXXXDGASNGRGPMS------------FE 357
            KK DRFIRPNF+YWSM+RTTY                AS+    M+             E
Sbjct: 533  KKCDRFIRPNFVYWSMIRTTYDDGEDSSDEEPAEDYEASHPDDVMNDDAMARSYDSHDLE 592

Query: 356  DDEFDMNLSKMSITPRNSFMFGNEEHRRMQMPSRI 252
             DEFD +++KMSITP+NS  +   +  ++QMPSRI
Sbjct: 593  LDEFDHSMNKMSITPKNSLYYRFGDELKVQMPSRI 627



 Score = 56.2 bits (134), Expect(2) = e-133
 Identities = 32/54 (59%), Positives = 36/54 (66%), Gaps = 9/54 (16%)
 Frame = -3

Query: 1654 KGIADLVPLAPSRLEQIVRERVPNVFAKEA---------QIVVYVENMLMLESG 1520
            K IADLVPLAPSRL  IV +R+PNVF KE          +I +YVENML LE G
Sbjct: 164  KDIADLVPLAPSRLVPIVIQRMPNVFTKEPVSSICSTLFRIQIYVENMLRLEGG 217


>ref|XP_003547884.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Glycine max]
          Length = 627

 Score =  395 bits (1016), Expect(2) = e-120
 Identities = 216/396 (54%), Positives = 272/396 (68%), Gaps = 13/396 (3%)
 Frame = -2

Query: 1400 NRLIDLDVEIGWDEILQDDPSKGIFEMEVEDMARPVDETEIDMIEPVREYSGRKVLWGNV 1221
            +RL++LDVEIGWD ILQ+D +KGIFEME+ED+    DE E     P  E   RK L GN+
Sbjct: 224  DRLLELDVEIGWDGILQED-AKGIFEMELEDVTEFADEDENCDSMPPSELLNRKNLQGNL 282

Query: 1220 VAQKLDTLMVLTFDHLESCFKSGRLVQVFETLLQSFQSTVLNAYKSKFAQFVMFYACSLD 1041
            V +KLD+LMVL F HLESC  SGRL +VF+TLL SFQ TVLNAYKSKF Q+VMFYAC+LD
Sbjct: 283  VVEKLDSLMVLAFLHLESCQSSGRLTEVFDTLLASFQRTVLNAYKSKFTQYVMFYACALD 342

Query: 1040 PEDCGTQFVSRLIDIFKSKVYPQDWRMSAVAYLASYLSRAKFLSASYVTIVLESLVDWCH 861
            PE CG +F   L D+F   V P   RMSA AYLASYL+RAKFLSA+ VT +++SLVDWC+
Sbjct: 343  PEGCGVKFAMVLADMFGCDVNPPITRMSAAAYLASYLTRAKFLSAALVTNIIQSLVDWCY 402

Query: 860  LYCENQIGEIYPKHHRVFYAGCQGIMYVLCFRMRSILANPRLKSQLVDMPLEQILKHPLN 681
             YC+ +  ++ P+ H+VFY+GCQ IMY+LCFRMRS++  PRLK QL++MP+E ILKH L+
Sbjct: 403  AYCKLRDFDMNPRAHQVFYSGCQAIMYILCFRMRSLMDIPRLKLQLLNMPMEAILKHKLS 462

Query: 680  PLEVCLPSIVDEFLRQAKAARLFRVSGTFIFHDQLESEQSRAFGGFERXXXXXXXXXXXL 501
            PL+VCLP++V EFLRQAKAA+LF  S +F+F D LES+ S+AFGG +R           L
Sbjct: 463  PLKVCLPTVVVEFLRQAKAAQLFMASESFVFDDMLESDLSKAFGGIDRLDMFFPFDPCLL 522

Query: 500  KKSDRFIRPNFIYWSMVRTTYXXXXXXXXXXXXXXDGASN--GRGPMSFEDDE------- 348
            KKS+ +IRP+F+ WS VRTTY                  +   R      DD+       
Sbjct: 523  KKSESYIRPHFVRWSKVRTTYDDDDNDELSDSGSEVSDDDFIDRNTKDMIDDDMMVSVEG 582

Query: 347  FDMN--LSKMSITPRNSFMFGNEE--HRRMQMPSRI 252
            FD N  L+KMSITPR SF  G E   ++  +MP+RI
Sbjct: 583  FDFNPDLNKMSITPRKSFKHGFETQLNQCKRMPARI 618



 Score = 65.1 bits (157), Expect(2) = e-120
 Identities = 32/48 (66%), Positives = 40/48 (83%)
 Frame = -3

Query: 1654 KGIADLVPLAPSRLEQIVRERVPNVFAKEAQIVVYVENMLMLESGDMG 1511
            K IADLVPLAP RL  IV +++P+VF+KE +IV+YVENML LESG +G
Sbjct: 164  KEIADLVPLAPLRLSPIVIQKMPSVFSKETEIVMYVENMLRLESGAIG 211


>ref|XP_003534228.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Glycine max]
          Length = 628

 Score =  390 bits (1001), Expect(2) = e-118
 Identities = 212/397 (53%), Positives = 272/397 (68%), Gaps = 14/397 (3%)
 Frame = -2

Query: 1400 NRLIDLDVEIGWDEILQDDPSKGIFEMEVEDMARPVDETEIDMIEPVREYSGRKVLWGNV 1221
            +RL++LDVEIGWD ILQ+D +KGIFEME+ED+    DE E        E   RK L GN+
Sbjct: 224  DRLLELDVEIGWDGILQED-AKGIFEMELEDVTEFTDEDENCDSMLSSELLNRKNLQGNL 282

Query: 1220 VAQKLDTLMVLTFDHLESCFKSGRLVQVFETLLQSFQSTVLNAYKSKFAQFVMFYACSLD 1041
            V +KLD+LMVL F HLESC  SGRL +VF TLL SFQ TVLNAYKSKF QFVMFYAC+LD
Sbjct: 283  VVEKLDSLMVLAFLHLESCQNSGRLAEVFNTLLASFQRTVLNAYKSKFTQFVMFYACALD 342

Query: 1040 PEDCGTQFVSRLIDIFKSKVYPQDWRMSAVAYLASYLSRAKFLSASYVTIVLESLVDWCH 861
            PE CG +F   L D+F     P   RMSAVAYLASYL+RAKFLSA+ VT +++SLVDWC+
Sbjct: 343  PEGCGVKFAMVLADMFGGDANPPITRMSAVAYLASYLTRAKFLSAALVTSIIQSLVDWCY 402

Query: 860  LYCENQIGEIYPKHHRVFYAGCQGIMYVLCFRMRSILANPRLKSQLVDMPLEQILKHPLN 681
             YC+ +  ++ P+ H+VFY+GCQ IMY++CFRMRS++  PRLK QL++MP+E ILKH L+
Sbjct: 403  AYCKFRDFDMNPRAHQVFYSGCQAIMYIMCFRMRSLMDVPRLKLQLLNMPMEAILKHKLS 462

Query: 680  PLEVCLPSIVDEFLRQAKAARLFRVSGTFIFHDQLESEQSRAFGGFERXXXXXXXXXXXL 501
            PL+VCLP++V EFLRQAKAA+LF  S +F+F D LES+ S+AFGG +R           L
Sbjct: 463  PLKVCLPTVVVEFLRQAKAAQLFMASESFVFDDMLESDLSKAFGGMDRLDMFFPFDPCLL 522

Query: 500  KKSDRFIRPNFIYWSMVRTTYXXXXXXXXXXXXXXDGASN---GRGPMSFEDD------- 351
            K+S+ +IRP+F+ WS VRTTY              + + +    R      DD       
Sbjct: 523  KRSESYIRPHFVRWSKVRTTYDDDDDNDEVSDSGSELSDDDFIDRNAKDMIDDDMMVSVE 582

Query: 350  --EFDMNLSKMSITPRNSFMFGNEE--HRRMQMPSRI 252
              +F+ +L+KMSITPR SF  G E   ++  +MP+RI
Sbjct: 583  GADFNPDLNKMSITPRKSFKHGFETPLNQCTRMPARI 619



 Score = 65.5 bits (158), Expect(2) = e-118
 Identities = 32/48 (66%), Positives = 40/48 (83%)
 Frame = -3

Query: 1654 KGIADLVPLAPSRLEQIVRERVPNVFAKEAQIVVYVENMLMLESGDMG 1511
            K IADLVPLAP RL  IV +++P+VF+KE +IV+YVENML LESG +G
Sbjct: 164  KEIADLVPLAPLRLSPIVIQKMPSVFSKETEIVMYVENMLRLESGALG 211


>ref|XP_004155826.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Cucumis sativus]
          Length = 625

 Score =  388 bits (997), Expect(2) = e-114
 Identities = 217/397 (54%), Positives = 270/397 (68%), Gaps = 14/397 (3%)
 Frame = -2

Query: 1400 NRLIDLDVEIGWDEILQDDPSKGIFEMEVEDMARPVDETEIDMIEPVREYSGRKVLWGNV 1221
            ++L+DLDVEIGWD+ILQDD SKGIFEME+ED     D+   D  E  RE S R+ L GNV
Sbjct: 224  DKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDDTTDDINEDSSELPRELS-RRSLGGNV 282

Query: 1220 VAQKLDTLMVLTFDHLESCFKSGRLVQVFETLLQSFQSTVLNAYKSKFAQFVMFYACSLD 1041
            +A+ LD+L+VLTF+HLESC + GRL +VF+ LL SFQ TVL AYKSKFAQF++FYACSLD
Sbjct: 283  IAETLDSLIVLTFEHLESCERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFIVFYACSLD 342

Query: 1040 PEDCGTQFVSRLIDIFKSKVYPQDWRMSAVAYLASYLSRAKFLSASYVTIVLESLVDWCH 861
            PE CG +F   L D+F S   P   RMSAV+YLAS+LSR KFL+ S VT +L+ LVDWC 
Sbjct: 343  PEVCGARFAISLADMFVSCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCL 402

Query: 860  LYCENQIGEIYPKHHRVFYAGCQGIMYVLCFRMRSILANPRLKSQLVDMPLEQILKHPLN 681
             Y +    +  PK H+VFY+GCQ IMYVLCFRMRSIL  PRLKSQL+ MP+  +L H L+
Sbjct: 403  EYGKTLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLS 462

Query: 680  PLEVCLPSIVDEFLRQAKAARLFRVSGTFIFHDQLESEQSRAFGGFERXXXXXXXXXXXL 501
            PL+VCLPSIV+EFLRQAK A LF  S  FIF+  LES+ SR+FGG ER           L
Sbjct: 463  PLKVCLPSIVEEFLRQAKVANLFTPSENFIFNGLLESDYSRSFGGLERLDMFFPFDPCLL 522

Query: 500  KKSDRFIRPNFIYWSMVRTTYXXXXXXXXXXXXXXDGA------------SNGRGPMSFE 357
            KK DR++RP+F+YWSMVR TY              + A             +    +S++
Sbjct: 523  KKCDRYLRPHFVYWSMVRPTYDEEEEEEDDGGSSDEDAEIFPDRIDENLMDDEAMAISYD 582

Query: 356  DDEFDMN--LSKMSITPRNSFMFGNEEHRRMQMPSRI 252
            D +FD++  L+KMSITPRNS  +  +    +QMPSRI
Sbjct: 583  DQDFDLDSGLNKMSITPRNSLQYRCD---FVQMPSRI 616



 Score = 51.2 bits (121), Expect(2) = e-114
 Identities = 26/45 (57%), Positives = 31/45 (68%)
 Frame = -3

Query: 1654 KGIADLVPLAPSRLEQIVRERVPNVFAKEAQIVVYVENMLMLESG 1520
            K I+DLVPLAP RLEQ V  ++  VF  E+   +YVENML LE G
Sbjct: 164  KDISDLVPLAPLRLEQKVVHKMQRVFFNESLTTIYVENMLRLEKG 208


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