BLASTX nr result

ID: Atractylodes21_contig00004566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00004566
         (1180 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284419.2| PREDICTED: DIS3-like exonuclease 2-like [Vit...   341   2e-91
ref|XP_002513779.1| RNA binding protein, putative [Ricinus commu...   339   7e-91
ref|XP_002306619.1| predicted protein [Populus trichocarpa] gi|2...   332   1e-88
ref|XP_002302251.1| predicted protein [Populus trichocarpa] gi|2...   315   2e-83
ref|XP_003543790.1| PREDICTED: DIS3-like exonuclease 2-like [Gly...   311   2e-82

>ref|XP_002284419.2| PREDICTED: DIS3-like exonuclease 2-like [Vitis vinifera]
          Length = 1131

 Score =  341 bits (874), Expect = 2e-91
 Identities = 191/382 (50%), Positives = 242/382 (63%), Gaps = 6/382 (1%)
 Frame = +2

Query: 53   IESFAES--MAHNQVETYVQRKHFAAHWSMEAVNAALEKGDVFKSIFRVNAHNRVEAYCR 226
            I+SF     ++  Q E   QRK+F  HWS E VN ALEKG+VF++ FRVNA+NR+EAYC 
Sbjct: 143  IQSFTNKNVLSPYQDEGCAQRKYFTPHWSTEVVNEALEKGNVFRASFRVNAYNRLEAYCT 202

Query: 227  IDGVPVDVLINGFHSQNRAIEGDIVAIKVEPLSSWTKMKGSIEASRHPPM-EGNKLLEGV 403
            I+GV  DVLI+G  SQNRA+EGDIVA+KV+P S W++MKGS     +  + E + LL  V
Sbjct: 203  IEGVKTDVLISGLASQNRAVEGDIVAVKVDPFSLWSRMKGSTVFPNNAGLTEDHNLLSDV 262

Query: 404  SESNNENCRRKKKTDAKMECVCNTNGQAFPDKGLHSVNYNFHDQNVGQELIRPANSRNIN 583
            +    ++ + K K D   +     N     DKG    +  F  +N+ QE   P    ++N
Sbjct: 263  TFVG-DSWKGKGKVDVNCDFGHERNHFLLHDKGFPYEDNAFSAENISQE---PMGHNHVN 318

Query: 584  GNNH--FELDH-STGXXXXXXXXXXXLCTMIGSFPSKRPTGRVVAIIERSPRRKAIVGFL 754
            G++   F   H S             +C  I SFPSKRPTG VVAIIERSPRR A+VGFL
Sbjct: 319  GHHPPVFGPSHVSCFGERSNMDSLEKICAAINSFPSKRPTGSVVAIIERSPRRVAVVGFL 378

Query: 755  RVKQWLFSMENCRKDXXXXXXXXXXXXREYIQLIPTDPKFPKMMVPVKSLPNSIMKRLEA 934
             VKQWL S    RK              EYIQL PTDPKFPKM+VPVK L + I KRLE 
Sbjct: 379  SVKQWLSSRVLHRKGTKMNKTYLSLSDSEYIQLTPTDPKFPKMVVPVKGLSDCIKKRLED 438

Query: 935  CDLTLEMELLAAQIVEWSEEYDTPCAHVVHIFGRGGEVESQIAAILFQNAVDSSDFPPEA 1114
             D ++EMEL+AAQI +W EE   P AHV+HIFGRGGE+E +IAAILF+NA+  S+F PE+
Sbjct: 439  GDASMEMELVAAQISDWGEESSLPLAHVMHIFGRGGEIEPRIAAILFENAIRPSEFSPES 498

Query: 1115 MSCIPRAPWRIPEEEFLRRRDL 1180
            +SC+P  PW++P+EE  RRRDL
Sbjct: 499  LSCLPHIPWKVPQEEIERRRDL 520


>ref|XP_002513779.1| RNA binding protein, putative [Ricinus communis]
            gi|223546865|gb|EEF48362.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 1099

 Score =  339 bits (870), Expect = 7e-91
 Identities = 184/364 (50%), Positives = 235/364 (64%), Gaps = 7/364 (1%)
 Frame = +2

Query: 110  KHFAAHWSMEAVNAALEKGDVFKSIFRVNAHNRVEAYCRIDGVPVDVLINGFHSQNRAIE 289
            K FA+HWS+EA++ ALEKGD FK++F VNAHNR+EAYC+I+GV  DVLI+G   QNRA+E
Sbjct: 135  KIFASHWSIEAIDEALEKGDAFKAVFHVNAHNRLEAYCKIEGVSTDVLISGLAVQNRAVE 194

Query: 290  GDIVAIKVEPLSSWTKMKGSIEASRHPPM--EGNKLLEGVSESNNENCRRKKKTDAKMEC 463
            GD+V IKV+PL  WTKMKGS   S    +  + N  +E +SE  + +C+ K K +   + 
Sbjct: 195  GDMVVIKVDPLPCWTKMKGSNGPSNSIALAEDCNSAVE-LSEMASGSCKGKIKVEVDHD- 252

Query: 464  VCNTNGQAFPDKGLHSVNYNFHDQNVGQELIRPANSRNINGNNHFELDHSTGXXXXXXXX 643
               +   + P KG+HS + +   + V QEL   +   NI   +H     S+         
Sbjct: 253  FAESGSFSLPQKGIHSEDSSCATEAVHQEL-NGSTGYNIGIGDHPSASESSNFGSSMGQH 311

Query: 644  XXX-----LCTMIGSFPSKRPTGRVVAIIERSPRRKAIVGFLRVKQWLFSMENCRKDXXX 808
                    LCTMI S P+KRPTGRVVAIIERSPRR AI+GFL VKQW +  E C+KD   
Sbjct: 312  EGANAVGRLCTMISSHPTKRPTGRVVAIIERSPRRDAIIGFLNVKQWFYCREACKKDSKK 371

Query: 809  XXXXXXXXXREYIQLIPTDPKFPKMMVPVKSLPNSIMKRLEACDLTLEMELLAAQIVEWS 988
                     REYIQL+PTDPKFPKMMV   SLP+SI KRLE  D T+EMEL+AAQI  W 
Sbjct: 372  NKNSSSISDREYIQLMPTDPKFPKMMVLASSLPDSIKKRLEGGDATVEMELVAAQIDNWD 431

Query: 989  EEYDTPCAHVVHIFGRGGEVESQIAAILFQNAVDSSDFPPEAMSCIPRAPWRIPEEEFLR 1168
            +E  +P AHV  IFGRG E+E Q++AIL++N +  SDF PE++SCIP   W +P EE  R
Sbjct: 432  DESPSPHAHVSRIFGRGSELEPQLSAILYENTICYSDFSPESLSCIPCDSWEVPAEEIRR 491

Query: 1169 RRDL 1180
            R+DL
Sbjct: 492  RKDL 495


>ref|XP_002306619.1| predicted protein [Populus trichocarpa] gi|222856068|gb|EEE93615.1|
            predicted protein [Populus trichocarpa]
          Length = 944

 Score =  332 bits (851), Expect = 1e-88
 Identities = 184/366 (50%), Positives = 235/366 (64%), Gaps = 7/366 (1%)
 Frame = +2

Query: 104  QRKHFAAHWSMEAVNAALEKGDVFKSIFRVNAHNRVEAYCRIDGVPVDVLINGFHSQNRA 283
            Q K FA +WSME VN ALEKGDVFK +FRVNAHNR+EAYC+I+GVP D+LI+G   QNRA
Sbjct: 4    QSKIFAPYWSMETVNEALEKGDVFKVLFRVNAHNRLEAYCKIEGVPTDLLISGIAVQNRA 63

Query: 284  IEGDIVAIKVEPLSSWTKMKGSIEASRH--PPMEGNKLLEGVSESNNENCRRKKKTDAKM 457
            +EGD+V I+V+PLS WTKMKGS E S +     + N  LE   ++      R+ K    M
Sbjct: 64   VEGDVVVIEVDPLSFWTKMKGSNEPSNNLSTAEDSNLHLEANGKAGGS---RQGKIKLNM 120

Query: 458  ECVCNTNGQAF-PDKGLH----SVNYNFHDQNVGQELIRPANSRNINGNNHFELDHSTGX 622
            +C     G +  P KG +    S+ YN+            AN  + + ++   + HS G 
Sbjct: 121  DCKYADFGNSLVPHKGFYYGYSSLGYNY------------ANGYHQSPSDSSHVAHSMGQ 168

Query: 623  XXXXXXXXXXLCTMIGSFPSKRPTGRVVAIIERSPRRKAIVGFLRVKQWLFSMENCRKDX 802
                      +C+MI S+PSKRPT RVVAIIE+SPRR AI+GFL VKQW +  E C+KD 
Sbjct: 169  SEVLNGVGR-MCSMISSYPSKRPTCRVVAIIEKSPRRDAIIGFLNVKQWFYYKEGCKKDA 227

Query: 803  XXXXXXXXXXXREYIQLIPTDPKFPKMMVPVKSLPNSIMKRLEACDLTLEMELLAAQIVE 982
                        EYI+++P DP+FPK+MV V SLPN I KRLE  D T+EME++AAQI +
Sbjct: 228  KKNKSLPSISNCEYIEIMPADPRFPKLMVLVSSLPNCIKKRLEDEDETVEMEMVAAQIDK 287

Query: 983  WSEEYDTPCAHVVHIFGRGGEVESQIAAILFQNAVDSSDFPPEAMSCIPRAPWRIPEEEF 1162
            WS+E   P AHV +IFGRG E+ESQI AIL +NAV  S+F PE++SC+P   W +PEEEF
Sbjct: 288  WSDESPFPEAHVSYIFGRGSEMESQINAILHENAVCCSEFSPESLSCLPSNTWEVPEEEF 347

Query: 1163 LRRRDL 1180
              RRDL
Sbjct: 348  QNRRDL 353


>ref|XP_002302251.1| predicted protein [Populus trichocarpa] gi|222843977|gb|EEE81524.1|
            predicted protein [Populus trichocarpa]
          Length = 860

 Score =  315 bits (806), Expect = 2e-83
 Identities = 173/372 (46%), Positives = 225/372 (60%), Gaps = 6/372 (1%)
 Frame = +2

Query: 83   NQVETYVQRKHFAAHWSMEAVNAALEKGDVFKSIFRVNAHNRVEAYCRIDGVPVDVLING 262
            +Q E   Q K FA +WS E VN ALEKGDVFK +FRVNAHNR+EAYC+I+GVP DVLI+G
Sbjct: 51   HQFEGQAQSKIFAPYWSTETVNEALEKGDVFKVLFRVNAHNRLEAYCKIEGVPTDVLISG 110

Query: 263  FHSQNRAIEGDIVAIKVEPLSSWTKMKGSIEASRHPPMEGNKLLEGVSESNNENCRRKKK 442
              +QNRA++GD+V I+V+PLS WTKMKGS   S +P  E + L                 
Sbjct: 111  IAAQNRAMDGDVVVIEVDPLSFWTKMKGSNVPSNNPTAEDSNL----------------H 154

Query: 443  TDAKMECVCNTNGQAFPDKGLH-----SVNYNFHDQNV-GQELIRPANSRNINGNNHFEL 604
             +A  +C  +      P KG+H           HD  V G       +S  +      E+
Sbjct: 155  LEANGKCA-DFGNSLVPQKGIHYDETACAGEVVHDNYVNGYHQSASESSLAVPSTGQDEV 213

Query: 605  DHSTGXXXXXXXXXXXLCTMIGSFPSKRPTGRVVAIIERSPRRKAIVGFLRVKQWLFSME 784
             +S G           +C M+  +PSKRPTGRVVAI+E+SPRR  IVGFL VKQW +  E
Sbjct: 214  SNSVGR----------ICAMLSLYPSKRPTGRVVAIVEKSPRRDVIVGFLNVKQWFYYRE 263

Query: 785  NCRKDXXXXXXXXXXXXREYIQLIPTDPKFPKMMVPVKSLPNSIMKRLEACDLTLEMELL 964
             CR++            REYI+++PTDP+FPK+MV V  LP+ I KRLE  D T+EMEL+
Sbjct: 264  GCRQNAKKNKSSLSISNREYIEMMPTDPRFPKLMVLVSVLPDCIKKRLENEDATVEMELV 323

Query: 965  AAQIVEWSEEYDTPCAHVVHIFGRGGEVESQIAAILFQNAVDSSDFPPEAMSCIPRAPWR 1144
            AAQI  WS++   P AHV  IFGRG E+ESQI AIL +NA+  S F PE++SC+P   W 
Sbjct: 324  AAQIDNWSDKSPFPEAHVSCIFGRGSEMESQINAILHENAICCSKFSPESLSCLPSNTWE 383

Query: 1145 IPEEEFLRRRDL 1180
            +P++E   R+D+
Sbjct: 384  VPKDEIENRKDI 395


>ref|XP_003543790.1| PREDICTED: DIS3-like exonuclease 2-like [Glycine max]
          Length = 1184

 Score =  311 bits (797), Expect = 2e-82
 Identities = 173/396 (43%), Positives = 241/396 (60%), Gaps = 25/396 (6%)
 Frame = +2

Query: 68   ESMAHNQVETYVQRKHFAAHWSMEAVNAALEKGDVFKSIFRVNAHNRVEAYCRIDGVPVD 247
            +S+   Q+    Q K+F+ HWS+EAV   LE+GDVFK++F VNAHNR+EAYC+IDG+P D
Sbjct: 195  DSVPCGQIGLCGQEKYFSPHWSVEAVEKELEEGDVFKALFHVNAHNRLEAYCKIDGMPTD 254

Query: 248  VLINGFHSQNRAIEGDIVAIKVEPLSSWTKMKGSIEASRHPPM-EGNKLLEGVSESNNEN 424
            V I G  +QNRA+EGD+VA+K +PL  WTKMKG   +  +    EG  L E   E     
Sbjct: 255  VFIGGIPAQNRAVEGDVVAVKFDPLPLWTKMKGPNGSCNNTATPEGCNLTED-KEVGGNI 313

Query: 425  CRRKKKTDAKMECVCNTNGQAFPDKGLHSVNYN-------------FHDQNVGQ------ 547
            C+ K K DA+ E   + +G+++P +     + N              +D    +      
Sbjct: 314  CKGKAKVDAEYE---SAHGRSYPGQNKEDADQNSLYKSYPFTETTMVYDDITSRGSTNHL 370

Query: 548  ELIRPANSRNINGN-----NHFELDHSTGXXXXXXXXXXXLCTMIGSFPSKRPTGRVVAI 712
            +L   AN  +ING+     N  +++  +G           +C ++ SFPSKRPTGRVVAI
Sbjct: 371  DLHGMANHDSINGHHCAAPNSLKINSCSGQSNAVEK----MCLLVNSFPSKRPTGRVVAI 426

Query: 713  IERSPRRKAIVGFLRVKQWLFSMENCRKDXXXXXXXXXXXXREYIQLIPTDPKFPKMMVP 892
            IERSPRR+ IVG + VKQW+   +  +KD             EYIQLIPTDPKFP MM+ 
Sbjct: 427  IERSPRREGIVGHINVKQWVSFRDTSKKDVKKNKNLISE--HEYIQLIPTDPKFPNMMLL 484

Query: 893  VKSLPNSIMKRLEACDLTLEMELLAAQIVEWSEEYDTPCAHVVHIFGRGGEVESQIAAIL 1072
            V+ LP  I KR+++ D+T++M+L+A QI +W EE   P AH++ +FG+GGEV++Q+ AIL
Sbjct: 485  VRKLPKCIKKRMKSGDVTIQMDLVAVQIDDWVEESPFPEAHILRVFGQGGEVQTQLDAIL 544

Query: 1073 FQNAVDSSDFPPEAMSCIPRAPWRIPEEEFLRRRDL 1180
            FQNA+  S+F PEA+SC+P  PW IP +E   R DL
Sbjct: 545  FQNAICLSEFSPEALSCLPCVPWEIPLKEIQSRIDL 580


Top