BLASTX nr result

ID: Atractylodes21_contig00004527 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00004527
         (882 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADC94862.1| MYB transcription factor 1 [Vitis pseudoreticulata]     68   6e-22
gb|ADC94863.1| MYB transcription factor 2 [Vitis pseudoreticulata]     65   7e-22
gb|AAX95766.1| Putative DNA binding protein, identical [Solanum ...    65   5e-20
ref|XP_002511478.1| DNA binding protein, putative [Ricinus commu...    66   2e-17
gb|ABU53684.1| myb transcription factor [Rosa hybrid cultivar]         66   2e-17

>gb|ADC94862.1| MYB transcription factor 1 [Vitis pseudoreticulata]
          Length = 317

 Score = 67.8 bits (164), Expect(2) = 6e-22
 Identities = 35/54 (64%), Positives = 37/54 (68%)
 Frame = +1

Query: 1   ISRNFVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDSVAAVPTEEKQ 162
           ISRNFVKTRTPTQVASHAQKYF               FDITT+SV AVP EE+Q
Sbjct: 133 ISRNFVKTRTPTQVASHAQKYFLRRNNLNRRRRRSSLFDITTESVTAVPMEEEQ 186



 Score = 63.2 bits (152), Expect(2) = 6e-22
 Identities = 50/128 (39%), Positives = 63/128 (49%), Gaps = 23/128 (17%)
 Frame = +2

Query: 251 QDALPSSQQISPLS--------GFPTA-TFPVTIGPVLPPVQLENGDE-----VNSGSML 388
           Q+  P SQQ SP +        GFP    FP+   PV+ PV ++N  E      N  +  
Sbjct: 191 QENTPQSQQ-SPKTFSDTGSGGGFPVVPAFPMPTNPVVVPVPIQNPMENLTLGQNDVNTR 249

Query: 389 LVRPTPN---PSTRVDLNLNKNYETDPWPVSLNLSLSFDSN------QSSPYQVISGFTT 541
           LVRP P    P    DLNLN     DP P+SL LSLS + N      + S +Q +S F  
Sbjct: 250 LVRPIPVLPIPPESTDLNLNLKSSVDPSPLSLKLSLSSNQNHPNQPSRHSAFQAMSSFNN 309

Query: 542 GDGMISVA 565
           GD +ISVA
Sbjct: 310 GDSIISVA 317


>gb|ADC94863.1| MYB transcription factor 2 [Vitis pseudoreticulata]
          Length = 305

 Score = 65.5 bits (158), Expect(2) = 7e-22
 Identities = 34/54 (62%), Positives = 36/54 (66%)
 Frame = +1

Query: 1   ISRNFVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDSVAAVPTEEKQ 162
           ISRNFVKTRTPTQVASHAQKYF               FDIT +SV AVP EE+Q
Sbjct: 121 ISRNFVKTRTPTQVASHAQKYFLRRNNLNRRRRRSSLFDITIESVTAVPMEEEQ 174



 Score = 65.1 bits (157), Expect(2) = 7e-22
 Identities = 51/128 (39%), Positives = 64/128 (50%), Gaps = 23/128 (17%)
 Frame = +2

Query: 251 QDALPSSQQISPLS--------GFPTA-TFPVTIGPVLPPVQLENGDE-----VNSGSML 388
           Q+  P SQQ SP +        GFP    FP+ I PV+ PV ++N  E      N  +  
Sbjct: 179 QENTPQSQQ-SPKTFSDTGSGGGFPVVPAFPMPINPVVVPVPIQNPMENLTLGQNDVNTR 237

Query: 389 LVRPTPN---PSTRVDLNLNKNYETDPWPVSLNLSLSFDSN------QSSPYQVISGFTT 541
           LVRP P    P    DLNLN     DP P+SL LSLS + N      + S +Q +S F  
Sbjct: 238 LVRPIPVLPIPPESTDLNLNLKSSVDPSPLSLKLSLSSNQNHPNQPSRHSAFQAMSSFNN 297

Query: 542 GDGMISVA 565
           GD +ISVA
Sbjct: 298 GDSIISVA 305


>gb|AAX95766.1| Putative DNA binding protein, identical [Solanum lycopersicum]
          Length = 302

 Score = 64.7 bits (156), Expect(2) = 5e-20
 Identities = 33/52 (63%), Positives = 35/52 (67%)
 Frame = +1

Query: 1   ISRNFVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDSVAAVPTEE 156
           ISRNFVKTRTPTQVASHAQKYF               FDITTDSV+ +P EE
Sbjct: 122 ISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDSVSVMPIEE 173



 Score = 59.7 bits (143), Expect(2) = 5e-20
 Identities = 42/126 (33%), Positives = 62/126 (49%), Gaps = 19/126 (15%)
 Frame = +2

Query: 245 KGQDALPSSQQISPLSGFPTATFPVT--IGPVLPPVQLENGDEV-------NSGSMLLVR 397
           K +  +P+   + P+    T  F V   + P++ PVQ+    E        ++ S +LV 
Sbjct: 177 KQEIPVPAPATLPPVETTKTNAFSVAPAVAPIIFPVQVNKSRENPTLFRHDHANSSMLVG 236

Query: 398 PTP-----NPSTRVDLNLNKNYETDPWPVSLNLSLSFDSNQS-----SPYQVISGFTTGD 547
           P P     NPS  +DLN N N   +P  +SL LSLS D  Q+     S Y V+S F+ G+
Sbjct: 237 PVPMFSMPNPSKSIDLNANHNSTIEPSSLSLRLSLSLDQGQASSTRHSAYNVMSSFSNGE 296

Query: 548 GMISVA 565
            +I VA
Sbjct: 297 SIIRVA 302


>ref|XP_002511478.1| DNA binding protein, putative [Ricinus communis]
           gi|223550593|gb|EEF52080.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 319

 Score = 66.2 bits (160), Expect(2) = 2e-17
 Identities = 34/54 (62%), Positives = 36/54 (66%)
 Frame = +1

Query: 1   ISRNFVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDSVAAVPTEEKQ 162
           ISRNFVKTRTPTQVASHAQKYF               FDITTD+V A P EE+Q
Sbjct: 132 ISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVTAFPMEEEQ 185



 Score = 49.3 bits (116), Expect(2) = 2e-17
 Identities = 40/118 (33%), Positives = 55/118 (46%), Gaps = 17/118 (14%)
 Frame = +2

Query: 263 PSSQQISPLSGFPTATFPVTIGPVLPPVQLENGDE------VNSGSMLL----VRPTPNP 412
           P   + S  S      F +T  PV+ P+ +E   +       NS + L+    V P P  
Sbjct: 202 PPLPETSNFSVMSMPAFSMTSSPVVLPIPIETPMQNLSLLQANSSTTLIRPIAVIPAPPT 261

Query: 413 STRVDLNLNKNYETDPWP-VSLNLSLSFDSNQS------SPYQVISGFTTGDGMISVA 565
           S   D+NLN    TD  P +SL LSL  D  +S      S +QV+  F  GDG+I+VA
Sbjct: 262 SGISDINLNLKASTDSSPNLSLKLSLPSDQRESPSSTRYSAFQVMPSFNNGDGIITVA 319


>gb|ABU53684.1| myb transcription factor [Rosa hybrid cultivar]
          Length = 294

 Score = 66.2 bits (160), Expect(2) = 2e-17
 Identities = 34/54 (62%), Positives = 36/54 (66%)
 Frame = +1

Query: 1   ISRNFVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDSVAAVPTEEKQ 162
           ISRN+VKTRTPTQVASHAQKYF               FDITTDSV A P EE+Q
Sbjct: 108 ISRNYVKTRTPTQVASHAQKYFLRRSNHNRRRRRSSLFDITTDSVPATPMEEEQ 161



 Score = 49.3 bits (116), Expect(2) = 2e-17
 Identities = 39/118 (33%), Positives = 57/118 (48%), Gaps = 17/118 (14%)
 Frame = +2

Query: 263 PSSQQISPLSGFPTATFPVTIGP-VLPPVQLENGDEVNSG-------SMLLVRPT----- 403
           P S+  +P        FP+ +GP V+      N  +  +G       S  +V P      
Sbjct: 179 PQSESCNPNGFSMVPIFPMNVGPAVVQSRHYRNNRKSKTGTRKSGVPSPKIVHPVALHSA 238

Query: 404 PNPSTRVDLNLNKNYETDPWPVSLNLSLSFDSNQS----SPYQVISGFTTGDGMISVA 565
           P+ +   DLNLN   +T P  ++LNLSLS +S +S    S +Q +S F  GD +ISVA
Sbjct: 239 PHATEASDLNLNATIDTSP--LALNLSLSMNSRESSSRHSAFQAMSSFGNGDNIISVA 294


Top