BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00004511
         (624 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su...   376   e-102
gb|ACD63084.1| RNA polymerase II largest subunit [Drimys winteri]     370   e-100
gb|ACD63088.1| RNA polymerase II largest subunit [Papaver orient...   367   e-100
gb|ACD63086.1| RNA polymerase II largest subunit [Liriodendron t...   367   e-100
gb|ACD63081.1| RNA polymerase II largest subunit [Asparagus offi...   367   1e-99

>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Vitis
           vinifera]
          Length = 1848

 Score =  376 bits (965), Expect = e-102
 Identities = 186/207 (89%), Positives = 195/207 (94%)
 Frame = -3

Query: 622 CEGGDEIDSQNQDSDEPVKKSRGGCGAQQPKITIEGMKMVAEYKLQKKKNDDAEQLPEPA 443
           CEGGDEI++Q  DSDEPVKKSRGGCGAQQPK+TIEGMKM+AEYK+Q+KKNDD EQLPEP 
Sbjct: 147 CEGGDEIETQALDSDEPVKKSRGGCGAQQPKLTIEGMKMIAEYKIQRKKNDDPEQLPEPV 206

Query: 442 ERKQQLSAERVLSVLKRISDEDCMLLGLNPKYARPDWMILQVLXXXXXXXXPSVMMDTSA 263
           ERKQQLSAERVL+VLKRISDEDC+LLGLNPKYARPDWMILQVL        PSVMMDTS+
Sbjct: 207 ERKQQLSAERVLNVLKRISDEDCILLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSS 266

Query: 262 RSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHVATYFDNELPGQPRATQ 83
           RSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHVATYFDNELPGQPRATQ
Sbjct: 267 RSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHVATYFDNELPGQPRATQ 326

Query: 82  RSGRPIKSICSRLKAKEGRIRGNLMGK 2
           RSGRPIKSICSRLKAKEGRIRGNLMGK
Sbjct: 327 RSGRPIKSICSRLKAKEGRIRGNLMGK 353


>gb|ACD63084.1| RNA polymerase II largest subunit [Drimys winteri]
          Length = 1010

 Score =  370 bits (950), Expect = e-100
 Identities = 182/207 (87%), Positives = 191/207 (92%)
 Frame = -3

Query: 622 CEGGDEIDSQNQDSDEPVKKSRGGCGAQQPKITIEGMKMVAEYKLQKKKNDDAEQLPEPA 443
           C+GGDEID Q QDS+EPVKK RGGCGAQQPK+T+EGMKM+AEYK  KKKNDD EQLPEP 
Sbjct: 66  CDGGDEIDVQGQDSEEPVKKPRGGCGAQQPKLTVEGMKMIAEYKATKKKNDDQEQLPEPV 125

Query: 442 ERKQQLSAERVLSVLKRISDEDCMLLGLNPKYARPDWMILQVLXXXXXXXXPSVMMDTSA 263
           ERKQQLSAERVLS+LKRISDEDC LLGL+PKYARPDWMILQVL        PSVMMDTS+
Sbjct: 126 ERKQQLSAERVLSILKRISDEDCRLLGLDPKYARPDWMILQVLPIPPPPVRPSVMMDTSS 185

Query: 262 RSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHVATYFDNELPGQPRATQ 83
           RSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFH+ATYFDNELPGQPRATQ
Sbjct: 186 RSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIATYFDNELPGQPRATQ 245

Query: 82  RSGRPIKSICSRLKAKEGRIRGNLMGK 2
           RSGRPIKSICSRLKAKEGRIRGNLMGK
Sbjct: 246 RSGRPIKSICSRLKAKEGRIRGNLMGK 272


>gb|ACD63088.1| RNA polymerase II largest subunit [Papaver orientale]
          Length = 1010

 Score =  367 bits (943), Expect = e-100
 Identities = 180/207 (86%), Positives = 193/207 (93%)
 Frame = -3

Query: 622 CEGGDEIDSQNQDSDEPVKKSRGGCGAQQPKITIEGMKMVAEYKLQKKKNDDAEQLPEPA 443
           C+GGDEID Q++D ++PVKKSRGGCGAQQPK+TIEGMKM+AEYK+Q+KK DD EQLPEP 
Sbjct: 66  CDGGDEIDVQDEDLEKPVKKSRGGCGAQQPKLTIEGMKMIAEYKIQRKKTDDPEQLPEPV 125

Query: 442 ERKQQLSAERVLSVLKRISDEDCMLLGLNPKYARPDWMILQVLXXXXXXXXPSVMMDTSA 263
           ERKQQL+AERVLSVLKRISDEDC+LLGLNPKYARPDWMILQVL        PSVMMDTSA
Sbjct: 126 ERKQQLTAERVLSVLKRISDEDCILLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSA 185

Query: 262 RSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHVATYFDNELPGQPRATQ 83
           RSEDDLTHQLAMIIRHNENLR+QERNGAPAHII EFAQLLQFH+ATYFDNELPGQPRATQ
Sbjct: 186 RSEDDLTHQLAMIIRHNENLRKQERNGAPAHIILEFAQLLQFHIATYFDNELPGQPRATQ 245

Query: 82  RSGRPIKSICSRLKAKEGRIRGNLMGK 2
           RSGRPIKSICSRLKAKEGRIRGNLMGK
Sbjct: 246 RSGRPIKSICSRLKAKEGRIRGNLMGK 272


>gb|ACD63086.1| RNA polymerase II largest subunit [Liriodendron tulipifera]
          Length = 1010

 Score =  367 bits (943), Expect = e-100
 Identities = 180/207 (86%), Positives = 192/207 (92%)
 Frame = -3

Query: 622 CEGGDEIDSQNQDSDEPVKKSRGGCGAQQPKITIEGMKMVAEYKLQKKKNDDAEQLPEPA 443
           CEGGD+I+ ++QD +EPVKK RGGCGAQQPK+T+EGMKM+AEYK  +KKNDD EQLPEP 
Sbjct: 66  CEGGDDIEVRDQDLEEPVKKRRGGCGAQQPKLTVEGMKMIAEYKATRKKNDDQEQLPEPV 125

Query: 442 ERKQQLSAERVLSVLKRISDEDCMLLGLNPKYARPDWMILQVLXXXXXXXXPSVMMDTSA 263
           ERKQQLSAERVLSVLKRISDEDC+LLGLNPKYARPDWMILQVL        PSVMMDTS+
Sbjct: 126 ERKQQLSAERVLSVLKRISDEDCLLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSS 185

Query: 262 RSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHVATYFDNELPGQPRATQ 83
           RSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFH+ATYFDNELPGQPRATQ
Sbjct: 186 RSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIATYFDNELPGQPRATQ 245

Query: 82  RSGRPIKSICSRLKAKEGRIRGNLMGK 2
           RSGRPIKSICSRLKAKEGRIRGNLMGK
Sbjct: 246 RSGRPIKSICSRLKAKEGRIRGNLMGK 272


>gb|ACD63081.1| RNA polymerase II largest subunit [Asparagus officinalis]
          Length = 1009

 Score =  367 bits (941), Expect = 1e-99
 Identities = 185/208 (88%), Positives = 191/208 (91%), Gaps = 1/208 (0%)
 Frame = -3

Query: 622 CEGGDEIDSQNQ-DSDEPVKKSRGGCGAQQPKITIEGMKMVAEYKLQKKKNDDAEQLPEP 446
           C GGD+ID Q Q DSDEPVKKSRGGCGAQQP ITI+GMKMVAEYK  KKK+DD EQLPEP
Sbjct: 66  CAGGDDIDVQGQQDSDEPVKKSRGGCGAQQPNITIDGMKMVAEYKATKKKSDDPEQLPEP 125

Query: 445 AERKQQLSAERVLSVLKRISDEDCMLLGLNPKYARPDWMILQVLXXXXXXXXPSVMMDTS 266
            ERKQQLSAERVLSVLKRISDEDC+LLGLNPKYARPDWMILQVL        PSVMMDTS
Sbjct: 126 VERKQQLSAERVLSVLKRISDEDCLLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTS 185

Query: 265 ARSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHVATYFDNELPGQPRAT 86
           ARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII+EFAQLLQFH+ATYFDNELPGQPRAT
Sbjct: 186 ARSEDDLTHQLAMIIRHNENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRAT 245

Query: 85  QRSGRPIKSICSRLKAKEGRIRGNLMGK 2
           QRSGRPIKSICSRLKAKEGRIRGNLMGK
Sbjct: 246 QRSGRPIKSICSRLKAKEGRIRGNLMGK 273