BLASTX nr result
ID: Atractylodes21_contig00004507
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00004507
(438 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera] 97 5e-31
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare] 94 2e-29
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa... 94 2e-29
dbj|BAB88749.1| integrase [Silene latifolia] 89 1e-28
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum... 95 1e-28
>emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]
Length = 1521
Score = 96.7 bits (239), Expect(3) = 5e-31
Identities = 38/70 (54%), Positives = 58/70 (82%)
Frame = +3
Query: 114 GPKLRFSTYDIELYAVVQAVKHWRHYLFHREFVLFTDHDSLRHIRSQDKVSHKHGLWLAF 293
G K ++STYD+E YAVVQA++HW+HYL ++EFVL++DH++LR++ SQ K++ +H W +F
Sbjct: 949 GAKKKYSTYDLEFYAVVQAIRHWQHYLSYKEFVLYSDHEALRYLNSQKKLNSRHAKWSSF 1008
Query: 294 LEKFTFVVKH 323
L+ FTF +KH
Sbjct: 1009 LQLFTFNLKH 1018
Score = 53.9 bits (128), Expect(3) = 5e-31
Identities = 25/40 (62%), Positives = 31/40 (77%)
Frame = +2
Query: 2 PDFSQAFELHTDTSKVGIGAVLS*GGRPIAYFSEKLSGSK 121
PDF + FE+ D S VGIGAVLS G P+A+FSEKL+G+K
Sbjct: 912 PDFEKVFEVACDASHVGIGAVLSQEGHPVAFFSEKLNGAK 951
Score = 29.3 bits (64), Expect(3) = 5e-31
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +1
Query: 337 NRVADALSRRSNMLISMRVVVPGFD 411
N+VADALSR++ +L++M GF+
Sbjct: 1024 NKVADALSRKALLLVNMSTTTIGFE 1048
>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1720
Score = 94.0 bits (232), Expect(3) = 2e-29
Identities = 37/71 (52%), Positives = 57/71 (80%)
Frame = +3
Query: 114 GPKLRFSTYDIELYAVVQAVKHWRHYLFHREFVLFTDHDSLRHIRSQDKVSHKHGLWLAF 293
GP L +STYD ELYA+V+ ++ W+HYL+ +EFV+ +DH+SL+HI+SQ K++ +H W+ F
Sbjct: 1104 GPSLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIKSQAKLNRRHAKWVEF 1163
Query: 294 LEKFTFVVKHK 326
+E F +V+KHK
Sbjct: 1164 IETFPYVIKHK 1174
Score = 52.4 bits (124), Expect(3) = 2e-29
Identities = 23/38 (60%), Positives = 29/38 (76%)
Frame = +2
Query: 2 PDFSQAFELHTDTSKVGIGAVLS*GGRPIAYFSEKLSG 115
PDF++ FEL D S +G+G VL G+P+AYFSEKLSG
Sbjct: 1067 PDFNKTFELECDASGIGLGGVLLQDGKPVAYFSEKLSG 1104
Score = 27.7 bits (60), Expect(3) = 2e-29
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 325 KRGSNRVADALSRRSNMLISMRVVVPGFDTFMEKVARD 438
K N +ADALSRR ML + + G +T ++ D
Sbjct: 1175 KGKDNVIADALSRRYTMLSQLDFKIFGLETIKDQYVHD 1212
>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|15217296|gb|AAK92640.1|AC079634_1 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431373|gb|AAP53161.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1708
Score = 94.0 bits (232), Expect(3) = 2e-29
Identities = 37/71 (52%), Positives = 57/71 (80%)
Frame = +3
Query: 114 GPKLRFSTYDIELYAVVQAVKHWRHYLFHREFVLFTDHDSLRHIRSQDKVSHKHGLWLAF 293
GP L +STYD EL+A+V+ ++ W+HYL+ +EFV+ +DH+SL+HIRSQ K++ +H W+ F
Sbjct: 1073 GPSLNYSTYDKELFALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQAKLNRRHAKWVEF 1132
Query: 294 LEKFTFVVKHK 326
+E F +V+KHK
Sbjct: 1133 IESFPYVIKHK 1143
Score = 50.4 bits (119), Expect(3) = 2e-29
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = +2
Query: 2 PDFSQAFELHTDTSKVGIGAVLS*GGRPIAYFSEKLSG 115
PDF++ FEL D S +G+G VL G+PI YFSEKLSG
Sbjct: 1036 PDFNKTFELECDASGIGLGGVLLQEGKPIEYFSEKLSG 1073
Score = 29.6 bits (65), Expect(3) = 2e-29
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +1
Query: 325 KRGSNRVADALSRRSNMLISMRVVVPGFDTFMEKVARD 438
K N +ADALSRR ML + + G +T E+ A D
Sbjct: 1144 KGKENVIADALSRRYAMLSQLDFKIFGLETIKEQYAHD 1181
>dbj|BAB88749.1| integrase [Silene latifolia]
Length = 282
Score = 89.0 bits (219), Expect(3) = 1e-28
Identities = 36/71 (50%), Positives = 53/71 (74%)
Frame = +3
Query: 114 GPKLRFSTYDIELYAVVQAVKHWRHYLFHREFVLFTDHDSLRHIRSQDKVSHKHGLWLAF 293
G KL++STYD E YA+++AV HW HYL + FVL +DH++L++I Q K+SH+H W+ +
Sbjct: 134 GAKLKYSTYDKEFYAIIRAVMHWSHYLKPKPFVLHSDHEALKYINGQHKLSHRHAKWVEY 193
Query: 294 LEKFTFVVKHK 326
L+ FTF K+K
Sbjct: 194 LQSFTFSSKYK 204
Score = 53.5 bits (127), Expect(3) = 1e-28
Identities = 25/41 (60%), Positives = 31/41 (75%)
Frame = +2
Query: 2 PDFSQAFELHTDTSKVGIGAVLS*GGRPIAYFSEKLSGSKV 124
PDF Q FE+ D S VGIGAVL +P+AYFSEKL+G+K+
Sbjct: 97 PDFDQLFEVECDASGVGIGAVLIQAQKPVAYFSEKLNGAKL 137
Score = 29.3 bits (64), Expect(3) = 1e-28
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +1
Query: 337 NRVADALSRRSNMLISMRVVVPGFDTFMEKVARD 438
N VADALSRR ++L +M V GF+ E D
Sbjct: 209 NVVADALSRRHSLLSTMGTRVLGFEFMKEMYKED 242
>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
aegilopoides]
Length = 1704
Score = 94.7 bits (234), Expect(3) = 1e-28
Identities = 37/73 (50%), Positives = 58/73 (79%)
Frame = +3
Query: 108 YRGPKLRFSTYDIELYAVVQAVKHWRHYLFHREFVLFTDHDSLRHIRSQDKVSHKHGLWL 287
+ GP L +STYD ELYA+V+ ++ W+HYL+ +EFV+ +DH+SL+HI+SQ K++ +H W+
Sbjct: 1087 FSGPSLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIKSQAKLNRRHAKWV 1146
Query: 288 AFLEKFTFVVKHK 326
F+E F +V+KHK
Sbjct: 1147 EFIETFPYVIKHK 1159
Score = 48.9 bits (115), Expect(3) = 1e-28
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = +2
Query: 2 PDFSQAFELHTDTSKVGIGAVLS*GGRPIAYFSEKLSG 115
P+F++ FEL D S +G+G VL G+P+AYFSEK SG
Sbjct: 1052 PNFNKTFELECDASGIGLGGVLLQDGKPVAYFSEKFSG 1089
Score = 27.7 bits (60), Expect(3) = 1e-28
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 325 KRGSNRVADALSRRSNMLISMRVVVPGFDTFMEKVARD 438
K N +ADALSRR ML + + G +T ++ D
Sbjct: 1160 KGKENVIADALSRRYTMLSQLDFKIFGLETIKDQYVHD 1197