BLASTX nr result

ID: Atractylodes21_contig00004504 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00004504
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...    95   5e-18
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...    92   4e-17
ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...    91   1e-16
gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]...    79   4e-13
emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera]    66   3e-09

>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 42/108 (38%), Positives = 69/108 (63%), Gaps = 1/108 (0%)
 Frame = -1

Query: 323 QKSASTG-GLQDGLPWAVKKIKLPEFSGFDPQGWIQKANLYFEINGTPSNLRLRLAQLSM 147
           ++ AS G   Q     A KK+KLP F G DP  WI +A +YF++  T  ++R++LA+LSM
Sbjct: 54  EEGASAGDSAQSESRLAGKKVKLPLFDGDDPVAWITRAEIYFDVQDTSDDMRVKLARLSM 113

Query: 146 VGVAQHWFTIVTQVYDSITWEEFQIELLQRFSGLEIQNPYEQLATIKQ 3
            G   HWF ++ +  D ++WE  +  L+ R+ G  ++NP+E+L+T++Q
Sbjct: 114 EGSTIHWFNLLMETEDELSWENLKRALIARYGGRRLENPFEELSTLRQ 161


>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 37/92 (40%), Positives = 64/92 (69%)
 Frame = -1

Query: 278  AVKKIKLPEFSGFDPQGWIQKANLYFEINGTPSNLRLRLAQLSMVGVAQHWFTIVTQVYD 99
            A KK+KLP F G DP  WI +A +YF++  TP ++R++L++LSM G   HWF ++ +  D
Sbjct: 743  AGKKVKLPLFEGDDPVAWITRAEIYFDVQNTPDDMRVKLSRLSMEGPTIHWFNLLMETED 802

Query: 98   SITWEEFQIELLQRFSGLEIQNPYEQLATIKQ 3
             ++ E+ +  L+ R+ G  ++NP+E+L+T++Q
Sbjct: 803  DLSREKLKKALIARYDGRRLENPFEELSTLRQ 834


>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 41/118 (34%), Positives = 70/118 (59%)
 Frame = -1

Query: 356 EEFPSFMGGSLQKSASTGGLQDGLPWAVKKIKLPEFSGFDPQGWIQKANLYFEINGTPSN 177
           +E  + +G S Q+ +   G         KK+KLP F G D   WI +  +YF++  T   
Sbjct: 36  QESENSVGESSQEESRLSG---------KKVKLPLFEGDDLVAWITRVEIYFDVQNTTDK 86

Query: 176 LRLRLAQLSMVGVAQHWFTIVTQVYDSITWEEFQIELLQRFSGLEIQNPYEQLATIKQ 3
           +R++LA+LSM G   HWF ++ +  D ++WE+ +  L+ R+ G  ++NP+E+L+TI+Q
Sbjct: 87  MRVKLARLSMEGSTIHWFNLLMETEDELSWEKLKRALIARYGGRRLENPFEELSTIRQ 144


>gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]
           gi|124360393|gb|ABN08406.1| Retrotransposon gag protein
           [Medicago truncatula]
          Length = 224

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 35/92 (38%), Positives = 60/92 (65%)
 Frame = -1

Query: 278 AVKKIKLPEFSGFDPQGWIQKANLYFEINGTPSNLRLRLAQLSMVGVAQHWFTIVTQVYD 99
           +VKK++L  F+G DP GWI +A +YF +  T   +++ LAQL M G   H+F  + +  +
Sbjct: 80  SVKKVELLMFNGDDPAGWIARAEVYFNVQNTTPEIKVNLAQLCMDGPTIHFFKGLLEENE 139

Query: 98  SITWEEFQIELLQRFSGLEIQNPYEQLATIKQ 3
           ++TWE+ +  LL+R+ G+   N +EQL+ ++Q
Sbjct: 140 TLTWEDLKDALLERYGGVSDGNVFEQLSALQQ 171


>emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera]
          Length = 1360

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 30/89 (33%), Positives = 48/89 (53%)
 Frame = -1

Query: 269 KIKLPEFSGFDPQGWIQKANLYFEINGTPSNLRLRLAQLSMVGVAQHWFTIVTQVYDSIT 90
           K+  P+F+G DP GWI KA  YF+        +++LA   + G+A  W   +T+    +T
Sbjct: 84  KLSFPKFNGDDPTGWIYKAEQYFDFMNITPGQQVQLASFHLEGIALQWHRWLTKFRGPLT 143

Query: 89  WEEFQIELLQRFSGLEIQNPYEQLATIKQ 3
           W+EF   +  RF   + ++P E L  +KQ
Sbjct: 144 WDEFTKAVQLRFGPTDYEDPSEALTRLKQ 172


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