BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00004503
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su...   320   6e-86
gb|ACD63086.1| RNA polymerase II largest subunit [Liriodendron t...   318   4e-85
gb|AAQ08516.1| RNA polymerase II largest subunit [Magnolia x sou...   318   4e-85
gb|ACD63088.1| RNA polymerase II largest subunit [Papaver orient...   315   2e-84
gb|ACD63084.1| RNA polymerase II largest subunit [Drimys winteri]     315   2e-84

>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Vitis
           vinifera]
          Length = 1848

 Score =  320 bits (821), Expect = 6e-86
 Identities = 160/177 (90%), Positives = 167/177 (94%)
 Frame = -1

Query: 532 KITIEGMKMVAEYKLQKKKNDDAEQLPEPAERKQQLSAERVLSVLKRISDEDCMLLGLNP 353
           K+TIEGMKM+AEYK+Q+KKNDD EQLPEP ERKQQLSAERVL+VLKRISDEDC+LLGLNP
Sbjct: 177 KLTIEGMKMIAEYKIQRKKNDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCILLGLNP 236

Query: 352 KYARPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPA 173
           KYARPDWMILQVL        PSVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPA
Sbjct: 237 KYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPA 296

Query: 172 HIISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGK 2
           HIISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGK
Sbjct: 297 HIISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGK 353


>gb|ACD63086.1| RNA polymerase II largest subunit [Liriodendron tulipifera]
          Length = 1010

 Score =  318 bits (814), Expect = 4e-85
 Identities = 158/177 (89%), Positives = 165/177 (93%)
 Frame = -1

Query: 532 KITIEGMKMVAEYKLQKKKNDDAEQLPEPAERKQQLSAERVLSVLKRISDEDCMLLGLNP 353
           K+T+EGMKM+AEYK  +KKNDD EQLPEP ERKQQLSAERVLSVLKRISDEDC+LLGLNP
Sbjct: 96  KLTVEGMKMIAEYKATRKKNDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNP 155

Query: 352 KYARPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPA 173
           KYARPDWMILQVL        PSVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPA
Sbjct: 156 KYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPA 215

Query: 172 HIISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGK 2
           HIISEFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGK
Sbjct: 216 HIISEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGK 272


>gb|AAQ08516.1| RNA polymerase II largest subunit [Magnolia x soulangeana]
          Length = 1010

 Score =  318 bits (814), Expect = 4e-85
 Identities = 158/177 (89%), Positives = 165/177 (93%)
 Frame = -1

Query: 532 KITIEGMKMVAEYKLQKKKNDDAEQLPEPAERKQQLSAERVLSVLKRISDEDCMLLGLNP 353
           K+T+EGMKM+AEYK  +KKNDD EQLPEP ERKQQLSAERVLSVLKRISDEDC+LLGLNP
Sbjct: 96  KLTVEGMKMIAEYKATRKKNDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNP 155

Query: 352 KYARPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPA 173
           KYARPDWMILQVL        PSVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPA
Sbjct: 156 KYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPA 215

Query: 172 HIISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGK 2
           HIISEFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGK
Sbjct: 216 HIISEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGK 272


>gb|ACD63088.1| RNA polymerase II largest subunit [Papaver orientale]
          Length = 1010

 Score =  315 bits (808), Expect = 2e-84
 Identities = 157/177 (88%), Positives = 165/177 (93%)
 Frame = -1

Query: 532 KITIEGMKMVAEYKLQKKKNDDAEQLPEPAERKQQLSAERVLSVLKRISDEDCMLLGLNP 353
           K+TIEGMKM+AEYK+Q+KK DD EQLPEP ERKQQL+AERVLSVLKRISDEDC+LLGLNP
Sbjct: 96  KLTIEGMKMIAEYKIQRKKTDDPEQLPEPVERKQQLTAERVLSVLKRISDEDCILLGLNP 155

Query: 352 KYARPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPA 173
           KYARPDWMILQVL        PSVMMDTSARSEDDLTHQLAMIIRHNENLR+QERNGAPA
Sbjct: 156 KYARPDWMILQVLPIPPPPVRPSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPA 215

Query: 172 HIISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGK 2
           HII EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGK
Sbjct: 216 HIILEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGK 272


>gb|ACD63084.1| RNA polymerase II largest subunit [Drimys winteri]
          Length = 1010

 Score =  315 bits (808), Expect = 2e-84
 Identities = 157/177 (88%), Positives = 164/177 (92%)
 Frame = -1

Query: 532 KITIEGMKMVAEYKLQKKKNDDAEQLPEPAERKQQLSAERVLSVLKRISDEDCMLLGLNP 353
           K+T+EGMKM+AEYK  KKKNDD EQLPEP ERKQQLSAERVLS+LKRISDEDC LLGL+P
Sbjct: 96  KLTVEGMKMIAEYKATKKKNDDQEQLPEPVERKQQLSAERVLSILKRISDEDCRLLGLDP 155

Query: 352 KYARPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPA 173
           KYARPDWMILQVL        PSVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPA
Sbjct: 156 KYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPA 215

Query: 172 HIISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGK 2
           HIISEFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGK
Sbjct: 216 HIISEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGK 272