BLASTX nr result
ID: Atractylodes21_contig00004400
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes21_contig00004400 (678 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABA46766.1| pre-mRNA splicing factor-like protein [Solanum tu... 282 5e-74 ref|XP_002519893.1| arginine/serine-rich splicing factor, putati... 280 1e-73 ref|XP_003634148.1| PREDICTED: pre-mRNA-splicing factor SF2-like... 276 3e-72 ref|XP_002321360.1| predicted protein [Populus trichocarpa] gi|2... 274 1e-71 ref|XP_003526756.1| PREDICTED: pre-mRNA-splicing factor SF2-like... 273 3e-71 >gb|ABA46766.1| pre-mRNA splicing factor-like protein [Solanum tuberosum] Length = 269 Score = 282 bits (721), Expect = 5e-74 Identities = 139/180 (77%), Positives = 144/180 (80%) Frame = -3 Query: 676 VGNLPLDIREWEVEDLFYKYGRILDIELKIPPRPPCYCFVEFESARDAEDAIRGRDGYNF 497 VGNLP DI+E EVEDLFYKYGRILDIELKIPPRPPCYCFVEFES+RDAEDAIRGRDGYNF Sbjct: 11 VGNLPADIKELEVEDLFYKYGRILDIELKIPPRPPCYCFVEFESSRDAEDAIRGRDGYNF 70 Query: 496 DGCRLRVELAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHSEYRVIVRGLPSSA 317 DGCRLRVELAH HS+YRVI+RGLPSSA Sbjct: 71 DGCRLRVELAHGGRGPSSSSDRRGSYGSSGGGGGGGGRHGISR--HSDYRVIIRGLPSSA 128 Query: 316 SWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYEDMKYAIRKLDDTEFRNPWTKTYI 137 SWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYEDMKYAIRKLDDTEFRNPWT+TYI Sbjct: 129 SWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYEDMKYAIRKLDDTEFRNPWTRTYI 188 >ref|XP_002519893.1| arginine/serine-rich splicing factor, putative [Ricinus communis] gi|223540939|gb|EEF42497.1| arginine/serine-rich splicing factor, putative [Ricinus communis] Length = 264 Score = 280 bits (717), Expect = 1e-73 Identities = 137/180 (76%), Positives = 142/180 (78%) Frame = -3 Query: 676 VGNLPLDIREWEVEDLFYKYGRILDIELKIPPRPPCYCFVEFESARDAEDAIRGRDGYNF 497 VGNLP DIREWEVEDLFYKYGRILDIELKIPPRPPCYCFVEFE+ RDAEDAIRGRDGYNF Sbjct: 11 VGNLPSDIREWEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENTRDAEDAIRGRDGYNF 70 Query: 496 DGCRLRVELAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHSEYRVIVRGLPSSA 317 DGCRLRVELAH HSE+RVIVRGLPSSA Sbjct: 71 DGCRLRVELAHGGRGQSSSDRRGGYGGSGGGGSGSGGRYCISR--HSEFRVIVRGLPSSA 128 Query: 316 SWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYEDMKYAIRKLDDTEFRNPWTKTYI 137 SWQDLKDHMRKAGDVCFAEVSRDS+GTFG+VDYTNYEDMKYAIRKLDDTEFRNPW + YI Sbjct: 129 SWQDLKDHMRKAGDVCFAEVSRDSDGTFGIVDYTNYEDMKYAIRKLDDTEFRNPWARAYI 188 >ref|XP_003634148.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis vinifera] gi|359490739|ref|XP_003634149.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 2 [Vitis vinifera] gi|302143975|emb|CBI23080.3| unnamed protein product [Vitis vinifera] Length = 250 Score = 276 bits (705), Expect = 3e-72 Identities = 134/180 (74%), Positives = 143/180 (79%) Frame = -3 Query: 676 VGNLPLDIREWEVEDLFYKYGRILDIELKIPPRPPCYCFVEFESARDAEDAIRGRDGYNF 497 VGNLP DIRE+E+EDLFYKYGRILD+ELKIPPRPPCYCFVEFE++RDAEDAIRGRDGYNF Sbjct: 11 VGNLPSDIREYEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENSRDAEDAIRGRDGYNF 70 Query: 496 DGCRLRVELAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHSEYRVIVRGLPSSA 317 DGCRLRVELAH HSEYRVIVRGLPSSA Sbjct: 71 DGCRLRVELAHGGRGQSSSSDRRGGHGSGGGGRFGVSR-------HSEYRVIVRGLPSSA 123 Query: 316 SWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYEDMKYAIRKLDDTEFRNPWTKTYI 137 SWQDLKDHMRKAGDVCFAEVSRD++GTFGLVDYTN+EDMKYAIRKLDDTEFRNPW + YI Sbjct: 124 SWQDLKDHMRKAGDVCFAEVSRDADGTFGLVDYTNHEDMKYAIRKLDDTEFRNPWARAYI 183 >ref|XP_002321360.1| predicted protein [Populus trichocarpa] gi|222868356|gb|EEF05487.1| predicted protein [Populus trichocarpa] Length = 240 Score = 274 bits (700), Expect = 1e-71 Identities = 134/180 (74%), Positives = 142/180 (78%) Frame = -3 Query: 676 VGNLPLDIREWEVEDLFYKYGRILDIELKIPPRPPCYCFVEFESARDAEDAIRGRDGYNF 497 VGNLP DIRE E+EDLFYKYGRILD+ELKIPPRPPCYCFVEFE+ARDAEDAIRGRDGYNF Sbjct: 11 VGNLPADIRESEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENARDAEDAIRGRDGYNF 70 Query: 496 DGCRLRVELAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHSEYRVIVRGLPSSA 317 DGCRLRVELAH HSE+RVIVRGLPSSA Sbjct: 71 DGCRLRVELAHGGRGPSSNDRRGGYGGGGGSGGRFGISR------HSEFRVIVRGLPSSA 124 Query: 316 SWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYEDMKYAIRKLDDTEFRNPWTKTYI 137 SWQDLKDHMRKAGDVCFAEVSRDS+GTFG+VDYTN+EDMKYAIRKLDDTEFRNPW + YI Sbjct: 125 SWQDLKDHMRKAGDVCFAEVSRDSDGTFGVVDYTNHEDMKYAIRKLDDTEFRNPWARAYI 184 >ref|XP_003526756.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max] Length = 263 Score = 273 bits (697), Expect = 3e-71 Identities = 133/183 (72%), Positives = 142/183 (77%), Gaps = 3/183 (1%) Frame = -3 Query: 676 VGNLPLDIREWEVEDLFYKYGRILDIELKIPPRPPCYCFVEFESARDAEDAIRGRDGYNF 497 VGNLP DIRE E+EDLFYKYGRI+DIELK+PPRPPCYCFVEF++ARDAEDAIRGRDGYNF Sbjct: 11 VGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAEDAIRGRDGYNF 70 Query: 496 DGCRLRVELAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR---HSEYRVIVRGLP 326 DGCRLRVELAH HSE+RVIVRGLP Sbjct: 71 DGCRLRVELAHGGRGPSSSDRRGYGGGGGGGGGGGGSGAGGGRFGISRHSEFRVIVRGLP 130 Query: 325 SSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYEDMKYAIRKLDDTEFRNPWTK 146 SSASWQDLKDHMRKAGDVCFAEVSRDSEGTFG+VDYTNY+DMKYAIRKLDDTEFRNPW + Sbjct: 131 SSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWAR 190 Query: 145 TYI 137 YI Sbjct: 191 AYI 193