BLASTX nr result

ID: Atractylodes21_contig00004360 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00004360
         (1287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pen...   374   e-101
emb|CBI17645.3| unnamed protein product [Vitis vinifera]              374   e-101
emb|CAN82640.1| hypothetical protein VITISV_028821 [Vitis vinifera]   374   e-101
ref|XP_002514857.1| pentatricopeptide repeat-containing protein,...   372   e-100
ref|XP_002325903.1| predicted membrane protein [Populus trichoca...   350   6e-94

>ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At3g23330 [Vitis vinifera]
          Length = 1008

 Score =  374 bits (960), Expect = e-101
 Identities = 197/257 (76%), Positives = 215/257 (83%), Gaps = 3/257 (1%)
 Frame = +2

Query: 290  DSTGSIIDLGRRSKVVVQTLKNNVIGDRIDPKVV---LNLDSGLGVVDAFFASLSMILVS 460
            ++ GS++DLGRRSK+V++ L+    GD+ DP  +   L+LDSGLGV DAFFASLSMI+VS
Sbjct: 35   ETNGSVLDLGRRSKIVLEDLEVETTGDKKDPDSISLDLSLDSGLGVFDAFFASLSMIIVS 94

Query: 461  EIGDETFIIAALMAMRHPKSIVLSGALSALFVMTILSTGLGRIVPNLISRKHTNSAATVL 640
            EIGDETFIIAALMAMRHPKSIVLSGALSAL VMT+LSTGLGRIVPNLISRKHTNSAATVL
Sbjct: 95   EIGDETFIIAALMAMRHPKSIVLSGALSALIVMTVLSTGLGRIVPNLISRKHTNSAATVL 154

Query: 641  YAFFGLRLLYIAWRSDSKASQXXXXXXXXXXXXSGQGKTAVRQFFSRFCTPIFLESFILT 820
            YAFFGLRLLYIAWRSDSKASQ            SGQGKT+ R+FFSRFCTPIFLESFILT
Sbjct: 155  YAFFGLRLLYIAWRSDSKASQKKEMEEVEEKLESGQGKTSFRRFFSRFCTPIFLESFILT 214

Query: 821  FLAEWGDRSQIATIALATHKNAVGVAVGATIGHTICTSVAVIGGSMLASKISQGTVATVX 1000
            FLAEWGDRSQIATIALATHKNA+GVAVGATIGHTICTS+AV+GGSMLASKISQGTVATV 
Sbjct: 215  FLAEWGDRSQIATIALATHKNAIGVAVGATIGHTICTSLAVVGGSMLASKISQGTVATVG 274

Query: 1001 XXXXXXXXXXXXXXPPL 1051
                          PPL
Sbjct: 275  GLLFLGFSLSSYFYPPL 291


>emb|CBI17645.3| unnamed protein product [Vitis vinifera]
          Length = 291

 Score =  374 bits (960), Expect = e-101
 Identities = 197/257 (76%), Positives = 215/257 (83%), Gaps = 3/257 (1%)
 Frame = +2

Query: 290  DSTGSIIDLGRRSKVVVQTLKNNVIGDRIDPKVV---LNLDSGLGVVDAFFASLSMILVS 460
            ++ GS++DLGRRSK+V++ L+    GD+ DP  +   L+LDSGLGV DAFFASLSMI+VS
Sbjct: 35   ETNGSVLDLGRRSKIVLEDLEVETTGDKKDPDSISLDLSLDSGLGVFDAFFASLSMIIVS 94

Query: 461  EIGDETFIIAALMAMRHPKSIVLSGALSALFVMTILSTGLGRIVPNLISRKHTNSAATVL 640
            EIGDETFIIAALMAMRHPKSIVLSGALSAL VMT+LSTGLGRIVPNLISRKHTNSAATVL
Sbjct: 95   EIGDETFIIAALMAMRHPKSIVLSGALSALIVMTVLSTGLGRIVPNLISRKHTNSAATVL 154

Query: 641  YAFFGLRLLYIAWRSDSKASQXXXXXXXXXXXXSGQGKTAVRQFFSRFCTPIFLESFILT 820
            YAFFGLRLLYIAWRSDSKASQ            SGQGKT+ R+FFSRFCTPIFLESFILT
Sbjct: 155  YAFFGLRLLYIAWRSDSKASQKKEMEEVEEKLESGQGKTSFRRFFSRFCTPIFLESFILT 214

Query: 821  FLAEWGDRSQIATIALATHKNAVGVAVGATIGHTICTSVAVIGGSMLASKISQGTVATVX 1000
            FLAEWGDRSQIATIALATHKNA+GVAVGATIGHTICTS+AV+GGSMLASKISQGTVATV 
Sbjct: 215  FLAEWGDRSQIATIALATHKNAIGVAVGATIGHTICTSLAVVGGSMLASKISQGTVATVG 274

Query: 1001 XXXXXXXXXXXXXXPPL 1051
                          PPL
Sbjct: 275  GLLFLGFSLSSYFYPPL 291


>emb|CAN82640.1| hypothetical protein VITISV_028821 [Vitis vinifera]
          Length = 291

 Score =  374 bits (960), Expect = e-101
 Identities = 197/257 (76%), Positives = 215/257 (83%), Gaps = 3/257 (1%)
 Frame = +2

Query: 290  DSTGSIIDLGRRSKVVVQTLKNNVIGDRIDPKVV---LNLDSGLGVVDAFFASLSMILVS 460
            ++ GS++DLGRRSK+V++ L+    GD+ DP  +   L+LDSGLGV DAFFASLSMI+VS
Sbjct: 35   ETNGSVLDLGRRSKIVLEDLEVETTGDKKDPDSISLDLSLDSGLGVFDAFFASLSMIIVS 94

Query: 461  EIGDETFIIAALMAMRHPKSIVLSGALSALFVMTILSTGLGRIVPNLISRKHTNSAATVL 640
            EIGDETFIIAALMAMRHPKSIVLSGALSAL VMT+LSTGLGRIVPNLISRKHTNSAATVL
Sbjct: 95   EIGDETFIIAALMAMRHPKSIVLSGALSALIVMTVLSTGLGRIVPNLISRKHTNSAATVL 154

Query: 641  YAFFGLRLLYIAWRSDSKASQXXXXXXXXXXXXSGQGKTAVRQFFSRFCTPIFLESFILT 820
            YAFFGLRLLYIAWRSDSKASQ            SGQGKT+ R+FFSRFCTPIFLESFILT
Sbjct: 155  YAFFGLRLLYIAWRSDSKASQKKEMEEVEEKLESGQGKTSFRRFFSRFCTPIFLESFILT 214

Query: 821  FLAEWGDRSQIATIALATHKNAVGVAVGATIGHTICTSVAVIGGSMLASKISQGTVATVX 1000
            FLAEWGDRSQIATIALATHKNA+GVAVGATIGHTICTS+AV+GGSMLASKISQGTVATV 
Sbjct: 215  FLAEWGDRSQIATIALATHKNAIGVAVGATIGHTICTSLAVVGGSMLASKISQGTVATVG 274

Query: 1001 XXXXXXXXXXXXXXPPL 1051
                          PPL
Sbjct: 275  GLLFLGFSLSSYFYPPL 291


>ref|XP_002514857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223545908|gb|EEF47411.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 832

 Score =  372 bits (955), Expect = e-100
 Identities = 203/298 (68%), Positives = 229/298 (76%)
 Frame = +2

Query: 176  GKIMNPRLNYGFVILFLFVFVTASLVSAQDVGGDKDNEDSTGSIIDLGRRSKVVVQTLKN 355
            G + +PRL    +ILF F+ +   L++AQD   + + E+ST SI DLGRR  +V + +  
Sbjct: 2    GFVSSPRL----LILFAFLLLGLPLIAAQDSLVENEKEESTASIKDLGRRGMIVTKDIDG 57

Query: 356  NVIGDRIDPKVVLNLDSGLGVVDAFFASLSMILVSEIGDETFIIAALMAMRHPKSIVLSG 535
            N +       + L++DSGLGV DAF ASLSMI+VSEIGDETFIIAALMAMRHPKSIVLSG
Sbjct: 58   NSVN------LGLHVDSGLGVFDAFIASLSMIIVSEIGDETFIIAALMAMRHPKSIVLSG 111

Query: 536  ALSALFVMTILSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWRSDSKASQXXXX 715
            AL+AL VMT+LSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWRSDSK SQ    
Sbjct: 112  ALTALIVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWRSDSKVSQKKEM 171

Query: 716  XXXXXXXXSGQGKTAVRQFFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNAVGV 895
                    SGQGKT  R+FFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNA+GV
Sbjct: 172  EEVEEKLESGQGKTTFRRFFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNAIGV 231

Query: 896  AVGATIGHTICTSVAVIGGSMLASKISQGTVATVXXXXXXXXXXXXXXXPPL*RQAES 1069
            AVGATIGHTICTS+AV+GGSMLASKISQGTVAT+               PPL  Q+ S
Sbjct: 232  AVGATIGHTICTSLAVVGGSMLASKISQGTVATIGGLLFLGFSLSSYFYPPLFLQSLS 289


>ref|XP_002325903.1| predicted membrane protein [Populus trichocarpa]
            gi|222862778|gb|EEF00285.1| predicted membrane protein
            [Populus trichocarpa]
          Length = 284

 Score =  350 bits (897), Expect = 6e-94
 Identities = 194/290 (66%), Positives = 216/290 (74%), Gaps = 1/290 (0%)
 Frame = +2

Query: 185  MNPRLNYGFVILFLFVFVTASLVSAQDVGGDKDNE-DSTGSIIDLGRRSKVVVQTLKNNV 361
            M  R N  F+IL +   V   L+S       ++NE D + S  DLGRR  VV        
Sbjct: 1    MGFRSNPRFIILVVAAAVLLLLLSLSHTAAAQENEGDESRSFQDLGRRGMVVRNGDDAKS 60

Query: 362  IGDRIDPKVVLNLDSGLGVVDAFFASLSMILVSEIGDETFIIAALMAMRHPKSIVLSGAL 541
             G+       L L+SGLG+ DAFFASLSMILVSEIGDETFIIAALMAMRHPKS VLSGAL
Sbjct: 61   AGNG------LKLESGLGIFDAFFASLSMILVSEIGDETFIIAALMAMRHPKSTVLSGAL 114

Query: 542  SALFVMTILSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWRSDSKASQXXXXXX 721
            +AL VMT+LSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWRSDSK+SQ      
Sbjct: 115  TALIVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWRSDSKSSQKKEMEE 174

Query: 722  XXXXXXSGQGKTAVRQFFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNAVGVAV 901
                  +GQGKT+ R++FSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNA+GVAV
Sbjct: 175  VEEKLEAGQGKTSFRRYFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNAIGVAV 234

Query: 902  GATIGHTICTSVAVIGGSMLASKISQGTVATVXXXXXXXXXXXXXXXPPL 1051
            GAT+GHTICTS+AV+GGS+LASKISQGTVAT+               PPL
Sbjct: 235  GATLGHTICTSLAVVGGSLLASKISQGTVATIGGLLFLCFSLSSYFYPPL 284


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