BLASTX nr result

ID: Atractylodes21_contig00004357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00004357
         (1546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273133.1| PREDICTED: geranylgeranyl diphosphate reduct...   651   0.0  
ref|XP_002521639.1| geranylgeranyl hydrogenase, putative [Ricinu...   634   e-179
ref|XP_002312852.1| predicted protein [Populus trichocarpa] gi|2...   626   e-177
ref|XP_002328221.1| predicted protein [Populus trichocarpa] gi|2...   616   e-174
ref|XP_003519480.1| PREDICTED: geranylgeranyl diphosphate reduct...   604   e-170

>ref|XP_002273133.1| PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic [Vitis
            vinifera]
          Length = 466

 Score =  651 bits (1680), Expect = 0.0
 Identities = 319/445 (71%), Positives = 365/445 (82%)
 Frame = +2

Query: 56   HPLHSLTVNSKPPISPSYRFTPFPKLIISATSTSNKPISGRRLRXXXXXXXXXXXXXXXX 235
            H L SL  +S P    +  F+      +  +S SN P+SGR+LR                
Sbjct: 19   HHLSSLFSSSLPFSIKTNPFSTSKPSSLIISSISNPPLSGRKLRAAVIGGGPAGSSAAET 78

Query: 236  XXXXXVETFLFERSPTGAKPCGGAIPLCMLDEFSIPPELIDRKVTHMKIISPSNLTVDFG 415
                 +ETFLFERSP  +KPCGGAIPLCML+EFSIPPEL+DR+VT MKIISPSNLTVDFG
Sbjct: 79   LAAGGIETFLFERSPASSKPCGGAIPLCMLEEFSIPPELVDRRVTRMKIISPSNLTVDFG 138

Query: 416  KTLKPNEFISMLRREVMDSYLRSRAESKGATLLKALVTKLDVPTSPNQPYIIHYTVNNTI 595
            KTLKPNE+I+MLRREV+DS+LR RAES GAT + ALVT LD+P+SP  PY+IHY    + 
Sbjct: 139  KTLKPNEYIAMLRREVLDSFLRRRAESAGATAITALVTSLDLPSSPASPYVIHYNAGGSR 198

Query: 596  KSLSVDVVVGADGANSRVAKSIHAGDYACAIAFQERIRLPDDKMEYYQNLAEMYVGNDVS 775
             SL+VDVV+GADGANSRVAKSI AGDY+CAIAFQERI+LP++KMEYYQ+LAEMYVGNDVS
Sbjct: 199  HSLAVDVVIGADGANSRVAKSIKAGDYSCAIAFQERIKLPEEKMEYYQDLAEMYVGNDVS 258

Query: 776  PDFYGWVFPKCDHVAVGTGTVCSKPNIKQYQQGIRSRVLPKIAGGTVIKVEAHPIPEHPR 955
            PDFY WVFPKCDHVAVGTGTVCSK NIK YQ+GIR RV PKI+GG VIKVEAHPIPEHPR
Sbjct: 259  PDFYAWVFPKCDHVAVGTGTVCSKQNIKLYQRGIRERVEPKISGGKVIKVEAHPIPEHPR 318

Query: 956  PVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEAIVKASEGGQRMIGESDLKREY 1135
            PVR+RGRVALVGDAAGYVTKCSGEGIYFAAKSG+MC EAI+KASEGG RMI E DL+REY
Sbjct: 319  PVRIRGRVALVGDAAGYVTKCSGEGIYFAAKSGKMCAEAILKASEGGLRMISEEDLRREY 378

Query: 1136 LKQWDSKYITTFRFLDLLQHVFYGSNAAREALVELCGDEYVQRMTFESYLYKKLANGERW 1315
            LK+WD KY+ T+R LDLL  VFYGSNAAREALVELCG+EYVQRMTFESYLYK+LA G+ W
Sbjct: 379  LKEWDGKYLVTYRLLDLLHRVFYGSNAAREALVELCGNEYVQRMTFESYLYKRLAEGDGW 438

Query: 1316 QDLKMVTNTIGSLVRCKLVGKGMEA 1390
            +D KMV NT GSL+RCK+VG+ ++A
Sbjct: 439  EDAKMVFNTFGSLIRCKIVGRDVQA 463


>ref|XP_002521639.1| geranylgeranyl hydrogenase, putative [Ricinus communis]
            gi|223539151|gb|EEF40746.1| geranylgeranyl hydrogenase,
            putative [Ricinus communis]
          Length = 451

 Score =  634 bits (1636), Expect = e-179
 Identities = 315/435 (72%), Positives = 360/435 (82%), Gaps = 2/435 (0%)
 Frame = +2

Query: 89   PPISPSYRFTPFPKLIISATSTSNKPISGRRLRXXXXXXXXXXXXXXXXXXXXXVETFLF 268
            P  +P+ + T F    +S TS     ISGR+LR                     +ETFLF
Sbjct: 17   PLYTPTSKSTFFKPQTLSITSA----ISGRKLRAAVIGGGPAGSSAAEALAAGGIETFLF 72

Query: 269  ERSPTGAKPCGGAIPLCMLDEFSIPPELIDRKVTHMKIISPSNLTVDFG-KTLKPNEFIS 445
            ERS + AKPCGGAIPLCMLDEF+IP  LIDR VT MKI+SPSNLTVDFG KTLKP+E I 
Sbjct: 73   ERSTSTAKPCGGAIPLCMLDEFNIPLNLIDRHVTRMKIVSPSNLTVDFGSKTLKPHESIP 132

Query: 446  MLRREVMDSYLRSRAESKGATLLKALVTKLDVPTSPNQPYIIHYTVNNTIKS-LSVDVVV 622
            MLRREV+DS+LRSR +SKGATL++ LV  +D+P+ P +PYIIH+ +NN IK  L+VDVV+
Sbjct: 133  MLRREVLDSFLRSRVQSKGATLIQGLVMHIDIPSLPKEPYIIHHIINNNIKGELAVDVVI 192

Query: 623  GADGANSRVAKSIHAGDYACAIAFQERIRLPDDKMEYYQNLAEMYVGNDVSPDFYGWVFP 802
            GADGANSRVAKSI+AG+Y+CAIAFQERIRLPDDKMEYY++LAEMYVG+DVSPDFY WVFP
Sbjct: 193  GADGANSRVAKSINAGNYSCAIAFQERIRLPDDKMEYYKDLAEMYVGDDVSPDFYAWVFP 252

Query: 803  KCDHVAVGTGTVCSKPNIKQYQQGIRSRVLPKIAGGTVIKVEAHPIPEHPRPVRVRGRVA 982
            KCDHVAVGTGTVCSK NIK +Q+GIR RV  KI GG VIKVEAHPIPEHPRP RVRGRVA
Sbjct: 253  KCDHVAVGTGTVCSKQNIKVFQRGIRERVRDKIKGGKVIKVEAHPIPEHPRPTRVRGRVA 312

Query: 983  LVGDAAGYVTKCSGEGIYFAAKSGRMCGEAIVKASEGGQRMIGESDLKREYLKQWDSKYI 1162
            LVGDAAGYVTKCSGEGIYFAAKSGRMCGE IVKASEGG++M+ E DLKREYL++WD+KY+
Sbjct: 313  LVGDAAGYVTKCSGEGIYFAAKSGRMCGEGIVKASEGGEKMVSEEDLKREYLREWDNKYV 372

Query: 1163 TTFRFLDLLQHVFYGSNAAREALVELCGDEYVQRMTFESYLYKKLANGERWQDLKMVTNT 1342
             TFRFLDLLQ VFYGSN  REALVELCGDEYVQRMTF+SYLYKKLA G+RW+D+KMV NT
Sbjct: 373  NTFRFLDLLQRVFYGSNVGREALVELCGDEYVQRMTFDSYLYKKLAGGDRWEDVKMVLNT 432

Query: 1343 IGSLVRCKLVGKGME 1387
             GSLVRC++VG+ ME
Sbjct: 433  FGSLVRCRIVGREME 447


>ref|XP_002312852.1| predicted protein [Populus trichocarpa] gi|222849260|gb|EEE86807.1|
            predicted protein [Populus trichocarpa]
          Length = 454

 Score =  626 bits (1614), Expect = e-177
 Identities = 314/452 (69%), Positives = 364/452 (80%), Gaps = 2/452 (0%)
 Frame = +2

Query: 41   AAAITHPLHSLTVNSKPPISPSYRFTPFPKLIISATSTSNKPISGRRLRXXXXXXXXXXX 220
            A A+TH LH         I    +  P PK + + T+TS+ P+SGR+LR           
Sbjct: 3    ALALTHNLHFTPTLPLKAIKQHQQ--PKPKTL-TITATSSSPLSGRKLRAAVIGGGPAGS 59

Query: 221  XXXXXXXXXXVETFLFERSPTGAKPCGGAIPLCMLDEFSIPPELIDRKVTHMKIISPSNL 400
                      VETFLFERSP+ AKPCGGAIPLCM+DEFSIP  LIDR VT MKIISPSNL
Sbjct: 60   SAAEALAAGGVETFLFERSPSTAKPCGGAIPLCMIDEFSIPLHLIDRHVTRMKIISPSNL 119

Query: 401  TVDFG-KTLKPNEFISMLRREVMDSYLRSRAESKGATLLKALVTKLDVPTS-PNQPYIIH 574
            TVDFG KTLK +EFI MLRREV+DS+LRSRA+S GA  +  LVT ++VP    ++PY+IH
Sbjct: 120  TVDFGSKTLKSHEFIPMLRREVLDSFLRSRAQSNGAQFITGLVTDIEVPDFLSSKPYVIH 179

Query: 575  YTVNNTIKSLSVDVVVGADGANSRVAKSIHAGDYACAIAFQERIRLPDDKMEYYQNLAEM 754
            +T+NN  +SL+VD++VGADGANSRVAK I+AG+Y CAIAFQERI+LPD+KMEYY NLAEM
Sbjct: 180  HTINNCKRSLAVDLIVGADGANSRVAKIINAGNYRCAIAFQERIKLPDEKMEYYHNLAEM 239

Query: 755  YVGNDVSPDFYGWVFPKCDHVAVGTGTVCSKPNIKQYQQGIRSRVLPKIAGGTVIKVEAH 934
            YVGNDVSPDFY WVFPKCDHVAVGTGT C++ +IK YQ+GIR RV  KI GG VIKVEAH
Sbjct: 240  YVGNDVSPDFYAWVFPKCDHVAVGTGTACARRDIKVYQRGIRERVKEKIKGGRVIKVEAH 299

Query: 935  PIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEAIVKASEGGQRMIGE 1114
            PIPE PRP RVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEAIVKASEGG+RM+ E
Sbjct: 300  PIPEQPRPRRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEAIVKASEGGERMVSE 359

Query: 1115 SDLKREYLKQWDSKYITTFRFLDLLQHVFYGSNAAREALVELCGDEYVQRMTFESYLYKK 1294
             DL+REYL++WD+KY+ TFRFLDLLQ VFYGSN  REALVELCGDEYVQRMTF+SYLYKK
Sbjct: 360  EDLRREYLREWDNKYVNTFRFLDLLQRVFYGSNVGREALVELCGDEYVQRMTFDSYLYKK 419

Query: 1295 LANGERWQDLKMVTNTIGSLVRCKLVGKGMEA 1390
            +A+G+RW D+K+V NT GS +RCK+VG+ MEA
Sbjct: 420  MASGDRWDDVKLVLNTFGSFMRCKVVGREMEA 451


>ref|XP_002328221.1| predicted protein [Populus trichocarpa]
            gi|224147708|ref|XP_002336528.1| predicted protein
            [Populus trichocarpa] gi|222835866|gb|EEE74287.1|
            predicted protein [Populus trichocarpa]
            gi|222837736|gb|EEE76101.1| predicted protein [Populus
            trichocarpa]
          Length = 451

 Score =  616 bits (1589), Expect = e-174
 Identities = 313/447 (70%), Positives = 360/447 (80%), Gaps = 5/447 (1%)
 Frame = +2

Query: 65   HSLTVNSKPPIS---PSYRFTPFPKLIISATSTSNKPISGRRLRXXXXXXXXXXXXXXXX 235
            H+L     PP+    P  +  P   L I+ATS     ISGR+LR                
Sbjct: 8    HNLLFAPTPPLKTLKPHQKPKPH-NLTITATS-----ISGRKLRAAVIGGGPAGSSAAEA 61

Query: 236  XXXXXVETFLFERSPTGAKPCGGAIPLCMLDEFSIPPELIDRKVTHMKIISPSNLTVDFG 415
                 VETFLFERSP+ AKPCGGAIPLCM+DEFSIP  L+DR VT MKIISPSNLTVDFG
Sbjct: 62   LAAGGVETFLFERSPSTAKPCGGAIPLCMIDEFSIPLHLVDRHVTRMKIISPSNLTVDFG 121

Query: 416  -KTLKPNEFISMLRREVMDSYLRSRAESKGATLLKALVTKLDVPTS-PNQPYIIHYTVNN 589
             +TLK +EFI MLRREV+DS+LRSRA+S GA  +  LVT ++VP    ++PY+IH+T+NN
Sbjct: 122  SRTLKSHEFIPMLRREVLDSFLRSRAQSNGAHFITGLVTDIEVPDFFSSKPYVIHHTINN 181

Query: 590  TIKSLSVDVVVGADGANSRVAKSIHAGDYACAIAFQERIRLPDDKMEYYQNLAEMYVGND 769
              +SL+VD++VGADGANSRVAK I AG+Y+CAIAFQERI+LPD+KMEYY +LAEMYVGND
Sbjct: 182  RKQSLAVDLIVGADGANSRVAKIIDAGNYSCAIAFQERIKLPDEKMEYYHDLAEMYVGND 241

Query: 770  VSPDFYGWVFPKCDHVAVGTGTVCSKPNIKQYQQGIRSRVLPKIAGGTVIKVEAHPIPEH 949
            VSPDFY WVFPKCDHVAVGTGTVC++ NIK YQ+GIR RV  KI GG VIKVEAHPIPEH
Sbjct: 242  VSPDFYAWVFPKCDHVAVGTGTVCARQNIKVYQRGIRERVREKIKGGKVIKVEAHPIPEH 301

Query: 950  PRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEAIVKASEGGQRMIGESDLKR 1129
            PRP RVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEAIVKASEGG++MI E DLKR
Sbjct: 302  PRPRRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEAIVKASEGGEKMISEEDLKR 361

Query: 1130 EYLKQWDSKYITTFRFLDLLQHVFYGSNAAREALVELCGDEYVQRMTFESYLYKKLANGE 1309
            EYL++WD KY+ TFRFLDLLQ VFYGS+  REALVELCGDEYVQRMTF+SYLYKKLA G+
Sbjct: 362  EYLREWDRKYVNTFRFLDLLQKVFYGSDVGREALVELCGDEYVQRMTFDSYLYKKLATGD 421

Query: 1310 RWQDLKMVTNTIGSLVRCKLVGKGMEA 1390
            RW D+K+V NT GSL+RCK++G+ MEA
Sbjct: 422  RWGDVKLVLNTFGSLMRCKVLGREMEA 448


>ref|XP_003519480.1| PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic-like
            [Glycine max]
          Length = 448

 Score =  604 bits (1557), Expect = e-170
 Identities = 306/433 (70%), Positives = 346/433 (79%), Gaps = 2/433 (0%)
 Frame = +2

Query: 101  PSYRFTPFPKLIISATSTSNKPISGRRLRXXXXXXXXXXXXXXXXXXXXXVETFLFERSP 280
            P+ +  P+ K   S T  ++K ISGR+LR                     VETFLFER+P
Sbjct: 17   PTSKPKPYLK---SFTIKASKSISGRKLRAAVIGGGPAGSSAAEALASGGVETFLFERNP 73

Query: 281  TG-AKPCGGAIPLCMLDEFSIPPELIDRKVTHMKIISPSNLTVDFGKTLKPNEFISMLRR 457
               AKPCGGAIPLCML+EF IP  LIDR VTHM+I SPSN+ VDFGKTLKP+EFI+MLRR
Sbjct: 74   PSVAKPCGGAIPLCMLEEFDIPNHLIDRHVTHMRIFSPSNIAVDFGKTLKPHEFIAMLRR 133

Query: 458  EVMDSYLRSRAESKGATLLKALVTKLDVPTSPNQPYIIHYTVNNTIK-SLSVDVVVGADG 634
            EV+DS+LRSRA + GAT +  LVT LD+P SP+ PY +HYT N + + SL+VDVV+GADG
Sbjct: 134  EVLDSFLRSRAHAAGATAISGLVTALDLPASPDAPYTVHYTANGSSRRSLAVDVVIGADG 193

Query: 635  ANSRVAKSIHAGDYACAIAFQERIRLPDDKMEYYQNLAEMYVGNDVSPDFYGWVFPKCDH 814
            ANSRVAK+I AGDYACAIAFQERI+LPD+KM YY+NLAEMYVG+DVSPDFY WVFPKCDH
Sbjct: 194  ANSRVAKAIGAGDYACAIAFQERIKLPDEKMAYYENLAEMYVGDDVSPDFYAWVFPKCDH 253

Query: 815  VAVGTGTVCSKPNIKQYQQGIRSRVLPKIAGGTVIKVEAHPIPEHPRPVRVRGRVALVGD 994
            VAVGTGTV SK +IK YQ+GIR RV PKI GG VIKVEAHPIPEHPRPVRVRGRVALVGD
Sbjct: 254  VAVGTGTVRSKKDIKLYQRGIRERVKPKINGGKVIKVEAHPIPEHPRPVRVRGRVALVGD 313

Query: 995  AAGYVTKCSGEGIYFAAKSGRMCGEAIVKASEGGQRMIGESDLKREYLKQWDSKYITTFR 1174
            AAGYVTKCSGEGIYFAAKSGR+CG  +V+ASEGG RMI E DL+REYLK WD++Y  TFR
Sbjct: 314  AAGYVTKCSGEGIYFAAKSGRVCGNGVVRASEGGDRMIDECDLRREYLKPWDAEYANTFR 373

Query: 1175 FLDLLQHVFYGSNAAREALVELCGDEYVQRMTFESYLYKKLANGERWQDLKMVTNTIGSL 1354
            FLDLLQ VFYGSNA REALVELCGDEYVQRMTFESYLYKKLA G      K+  NT+GSL
Sbjct: 374  FLDLLQRVFYGSNACREALVELCGDEYVQRMTFESYLYKKLARGRVLDHAKLFMNTLGSL 433

Query: 1355 VRCKLVGKGMEAF 1393
            VR K+V   ME+F
Sbjct: 434  VRSKVVQTSMESF 446


Top