BLASTX nr result

ID: Atractylodes21_contig00004326 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00004326
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522828.1| DNA binding protein, putative [Ricinus commu...    60   1e-07
gb|AEI83428.1| bHLH transcription factor 1 [Camellia sinensis]         57   2e-06
ref|XP_004151962.1| PREDICTED: transcription factor ILR3-like [C...    56   3e-06
ref|XP_004151959.1| PREDICTED: transcription factor ILR3-like [C...    56   3e-06
gb|ACG60665.1| basic helix-loop-helix protein [Nicotiana tabacum]      56   3e-06

>ref|XP_002522828.1| DNA binding protein, putative [Ricinus communis]
           gi|223537912|gb|EEF39526.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 235

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 27/46 (58%), Positives = 34/46 (73%)
 Frame = -3

Query: 143 MVSPENTNWIYDYGLIEDTAVPVGSFLTPACGSSWPMQAAMNGSSS 6
           MVSPENTNW+ +YGLI+D  VP  +F  P  G SWP+Q  +NGSS+
Sbjct: 1   MVSPENTNWLIEYGLIDDIPVPDANFSVPVTGFSWPVQ-TLNGSSN 45


>gb|AEI83428.1| bHLH transcription factor 1 [Camellia sinensis]
          Length = 235

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 23/40 (57%), Positives = 30/40 (75%)
 Frame = -3

Query: 143 MVSPENTNWIYDYGLIEDTAVPVGSFLTPACGSSWPMQAA 24
           MVSPE+TNW++DYGLIED +VP  +F  P  G  WP+ A+
Sbjct: 1   MVSPEHTNWLFDYGLIEDISVPDPNFSAPTSGFCWPLNAS 40


>ref|XP_004151962.1| PREDICTED: transcription factor ILR3-like [Cucumis sativus]
          Length = 235

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/44 (59%), Positives = 31/44 (70%)
 Frame = -3

Query: 143 MVSPENTNWIYDYGLIEDTAVPVGSFLTPACGSSWPMQAAMNGS 12
           MVSPEN NW++DYGLIED  VP G+F   +   SWP+Q   NGS
Sbjct: 1   MVSPENPNWLFDYGLIEDIPVPDGNFPVTSSSFSWPIQ-PFNGS 43


>ref|XP_004151959.1| PREDICTED: transcription factor ILR3-like [Cucumis sativus]
          Length = 234

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/44 (59%), Positives = 31/44 (70%)
 Frame = -3

Query: 143 MVSPENTNWIYDYGLIEDTAVPVGSFLTPACGSSWPMQAAMNGS 12
           MVSPEN NW++DYGLIED  VP G+F   +   SWP+Q   NGS
Sbjct: 1   MVSPENPNWLFDYGLIEDIPVPDGNFPVTSSSFSWPIQ-PFNGS 43


>gb|ACG60665.1| basic helix-loop-helix protein [Nicotiana tabacum]
          Length = 233

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/44 (61%), Positives = 33/44 (75%)
 Frame = -3

Query: 143 MVSPENTNWIYDYGLIEDTAVPVGSFLTPACGSSWPMQAAMNGS 12
           MVSPENTNW+YDYG  E++AVP  +F   A G +WPMQ  +NGS
Sbjct: 1   MVSPENTNWLYDYG-FEESAVPDSNFSATASGFNWPMQ-NLNGS 42


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