BLASTX nr result
ID: Atractylodes21_contig00004306
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes21_contig00004306 (738 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002274178.1| PREDICTED: glycine-rich RNA-binding protein ... 183 4e-44 ref|XP_004142081.1| PREDICTED: glycine-rich RNA-binding protein ... 177 2e-42 ref|XP_002531336.1| RNA binding protein, putative [Ricinus commu... 172 8e-41 ref|XP_003625508.1| RNA binding protein [Medicago truncatula] gi... 166 5e-39 ref|NP_001237071.1| uncharacterized protein LOC100306326 [Glycin... 166 6e-39 >ref|XP_002274178.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera] gi|297741476|emb|CBI32608.3| unnamed protein product [Vitis vinifera] Length = 140 Score = 183 bits (464), Expect = 4e-44 Identities = 91/141 (64%), Positives = 108/141 (76%) Frame = +3 Query: 105 MAFSSAFRRILNGXXXXXXXXXXXXRFSSTLTAPKLFISGLNRNTTDEKLREAFAPFGQL 284 MAF+S+FRR+L G RF+ST+T+PKLF+SGL+R TTDEKL+EAF+PFGQL Sbjct: 1 MAFASSFRRVLTGSSTILQSQFSPARFNSTVTSPKLFVSGLSRLTTDEKLKEAFSPFGQL 60 Query: 285 VEAKVIMDRATQRSKGFAFVTYASIDEAEKAREGMNAKFLDGWVIFVDPAKPKEYRXXXX 464 +EAKVI DR + RSKGF FVTY +++EAEKAREGMNAKFLDGWVIFVDPAKP+E R Sbjct: 61 LEAKVITDRVSGRSKGFGFVTYTTLEEAEKAREGMNAKFLDGWVIFVDPAKPREPRPPPQ 120 Query: 465 XXXXXXXXFGFKTNKTIGWCG 527 GF+TNKTIGWCG Sbjct: 121 QEPESSET-GFRTNKTIGWCG 140 >ref|XP_004142081.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like [Cucumis sativus] Length = 146 Score = 177 bits (449), Expect = 2e-42 Identities = 96/147 (65%), Positives = 106/147 (72%), Gaps = 6/147 (4%) Frame = +3 Query: 105 MAFSSAFRRILNGXXXXXXXXXXXX------RFSSTLTAPKLFISGLNRNTTDEKLREAF 266 MAF S RR+LNG R SSTLT+PKLFISGL+R TTDEKLREAF Sbjct: 1 MAFFSTVRRVLNGSSSSSSSSSILRSQWNAVRLSSTLTSPKLFISGLSRLTTDEKLREAF 60 Query: 267 APFGQLVEAKVIMDRATQRSKGFAFVTYASIDEAEKAREGMNAKFLDGWVIFVDPAKPKE 446 + FGQLV+AKV+ DRAT RSKGFAFVTY++IDEAEKARE MNAKFLDGWVIFVDPAKP+E Sbjct: 61 SSFGQLVDAKVVTDRATGRSKGFAFVTYSTIDEAEKAREEMNAKFLDGWVIFVDPAKPRE 120 Query: 447 YRXXXXXXXXXXXXFGFKTNKTIGWCG 527 R FG +TNKTIGWCG Sbjct: 121 PR-PPPQPQSETSEFGIRTNKTIGWCG 146 >ref|XP_002531336.1| RNA binding protein, putative [Ricinus communis] gi|223529058|gb|EEF31043.1| RNA binding protein, putative [Ricinus communis] Length = 144 Score = 172 bits (435), Expect = 8e-41 Identities = 91/144 (63%), Positives = 105/144 (72%), Gaps = 3/144 (2%) Frame = +3 Query: 105 MAFSSAFRRILNGXXXXXXXXXXXX--RFSSTLTAPKLFISGLNRNTTDEKLREAFAPFG 278 MAFSS RR L G RF STLT P+LF+SGL+R TTDEKL+EAF+PFG Sbjct: 1 MAFSSIIRRGLFGSSSSLPASPALFLTRFHSTLTCPRLFVSGLSRLTTDEKLKEAFSPFG 60 Query: 279 QLVEAKVIMDRATQRSKGFAFVTYASIDEAEKAREGMNAKFLDGWVIFVDPAKPKEYR-X 455 QLV+AKVI+DRA+ RSKGF F+TYA+I+EAEKAREGMNAKFLDGWVIFVDPAKP+E R Sbjct: 61 QLVDAKVIIDRASGRSKGFGFITYATIEEAEKAREGMNAKFLDGWVIFVDPAKPREQRLP 120 Query: 456 XXXXXXXXXXXFGFKTNKTIGWCG 527 G+K N+TIGWCG Sbjct: 121 PPPPPQPETSETGYKINRTIGWCG 144 >ref|XP_003625508.1| RNA binding protein [Medicago truncatula] gi|355500523|gb|AES81726.1| RNA binding protein [Medicago truncatula] Length = 141 Score = 166 bits (420), Expect = 5e-39 Identities = 88/142 (61%), Positives = 102/142 (71%), Gaps = 1/142 (0%) Frame = +3 Query: 105 MAFSSAFRRIL-NGXXXXXXXXXXXXRFSSTLTAPKLFISGLNRNTTDEKLREAFAPFGQ 281 MAF F R+L + R +STLT+PKLFISGL+R TTDEKL EAF+PFGQ Sbjct: 1 MAFFFGFHRLLRHSQSPLVSSHFTSIRLNSTLTSPKLFISGLSRLTTDEKLTEAFSPFGQ 60 Query: 282 LVEAKVIMDRATQRSKGFAFVTYASIDEAEKAREGMNAKFLDGWVIFVDPAKPKEYRXXX 461 L+EAKVI DR + RSKGFAFV+Y++I+EAEKAREGMNAKFLDGWVIFVDPAKP+E R Sbjct: 61 LLEAKVITDRGSGRSKGFAFVSYSTIEEAEKAREGMNAKFLDGWVIFVDPAKPREPRPPQ 120 Query: 462 XXXXXXXXXFGFKTNKTIGWCG 527 GF NKT+GWCG Sbjct: 121 QSQSQPSQT-GFTVNKTVGWCG 141 >ref|NP_001237071.1| uncharacterized protein LOC100306326 [Glycine max] gi|255628209|gb|ACU14449.1| unknown [Glycine max] Length = 139 Score = 166 bits (419), Expect = 6e-39 Identities = 89/141 (63%), Positives = 101/141 (71%) Frame = +3 Query: 105 MAFSSAFRRILNGXXXXXXXXXXXXRFSSTLTAPKLFISGLNRNTTDEKLREAFAPFGQL 284 MAF S +R+L R SSTLT+PKLF+SGL R T DEKL+EAF+ FGQL Sbjct: 1 MAFMSGVQRLLR-RTPLVHSHYASIRLSSTLTSPKLFVSGLCRLTIDEKLKEAFSSFGQL 59 Query: 285 VEAKVIMDRATQRSKGFAFVTYASIDEAEKAREGMNAKFLDGWVIFVDPAKPKEYRXXXX 464 VEAKVI+DRA+ RSKGFAFVTY +I+EAEKAREGMNAKFLDGWVIFVDPAKP+E R Sbjct: 60 VEAKVIIDRASGRSKGFAFVTYTTIEEAEKAREGMNAKFLDGWVIFVDPAKPREPRPPQQ 119 Query: 465 XXXXXXXXFGFKTNKTIGWCG 527 GF NKT+GWCG Sbjct: 120 SQSQPSET-GFTVNKTVGWCG 139