BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00004288
         (3233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523081.1| ATP-dependent RNA helicase, putative [Ricinu...  1142   0.0  
emb|CBI36846.3| unnamed protein product [Vitis vinifera]             1123   0.0  
ref|XP_002267435.2| PREDICTED: zinc finger CCCH domain-containin...  1118   0.0  
ref|XP_003591531.1| Zinc finger CCCH domain-containing protein [...  1074   0.0  
ref|NP_182290.1| zinc finger CCCH domain-containing protein 31 [...  1052   0.0  

>ref|XP_002523081.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223537643|gb|EEF39266.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1025

 Score = 1142 bits (2955), Expect = 0.0
 Identities = 589/1030 (57%), Positives = 720/1030 (69%), Gaps = 14/1030 (1%)
 Frame = -3

Query: 3192 MAVPSNSTDFQSSSEN-------FRNLPIMSIRSKIVEKIMENRVTLIVGETGCGKSSQV 3034
            MA  S+ST   SSS +       F +LPIMS+R KIVEK++ENRVTLIVG+TGCGKSSQV
Sbjct: 1    MAESSSSTSSCSSSRSSPFLQREFASLPIMSLRQKIVEKVLENRVTLIVGDTGCGKSSQV 60

Query: 3033 PQFLLGENIEPIICTQPRRFXXXXXXXXXXXARNCIIGGEVGYHIGHSKVMSASSKIVFK 2854
            PQFLL EN+EPI+CTQPRRF           ARNC +GGEVGYHIGH K +S  SKIVFK
Sbjct: 61   PQFLLEENMEPILCTQPRRFAVVAVAKMVAKARNCELGGEVGYHIGHLKHLSERSKIVFK 120

Query: 2853 TAGVLLEEMREKGLNALKYKVIILDEVHERSVESDLVLVCVKQFMIKNSGLRVVLMSATA 2674
            TAGVL +EMREKGLNALKYKVIILDEVHERS+ESDLVLVCVKQF+++N+ LRVVLMSATA
Sbjct: 121  TAGVLSDEMREKGLNALKYKVIILDEVHERSIESDLVLVCVKQFLLRNNDLRVVLMSATA 180

Query: 2673 DITRYKEYFRDLGRGERVEVLAIPSSSQHTLYQRRVSYLEQVVDXXXXXXXXXXLKYCSG 2494
            D  RY++YF+DLGRGERVEVLAIPSS+Q  L+QRRVSYLEQ +            KYCSG
Sbjct: 181  DFGRYRDYFKDLGRGERVEVLAIPSSNQQALFQRRVSYLEQEITCSQVLAT----KYCSG 236

Query: 2493 SDPVSSEAIMNDEVHKLIYNLVLHIHKNEPDMEKSILIFLPTYHALEQQWLSLSRFSSAF 2314
              P    A +  EVHKLI++LV+HIH NEPD+EK IL+FLPTYH L QQW  L    S F
Sbjct: 237  PSPAMVSADIKPEVHKLIHDLVMHIHDNEPDIEKGILVFLPTYHDLLQQWYLLKPLGSCF 296

Query: 2313 KIHILHSSIDTEQALNAMRISQSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVYWDAN 2134
            K+HILH SIDTEQAL AM+I +SHRKVILATNIAESSVTIPKVAYVIDSCRSLQV+WD  
Sbjct: 297  KVHILHGSIDTEQALLAMKIWKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDGT 356

Query: 2133 RKTESSEIVWVSESQAEQRRGRTGRTCDGEVYRLVCESFFGQLEKYEAPSILKLSLRQQV 1954
            RK + +E+VWVS+SQA+QR+GRTGRTCDG++YRLV  SFF +L++YE+P+IL+LSLRQQV
Sbjct: 357  RKKDYAELVWVSKSQADQRKGRTGRTCDGQIYRLVTRSFFNKLQEYESPAILRLSLRQQV 416

Query: 1953 LLTTCAESRAINDPKVLLQKVMDPPRPSVVDDALELLVHIRALEKTSLRGRHEPSFYGRX 1774
            L+  CAES+AINDP+VLLQK +DPP P V++DAL LLVHI+AL++TS RGR+EP+FYGR 
Sbjct: 417  LMVCCAESKAINDPRVLLQKTLDPPDPRVIEDALNLLVHIKALDRTSARGRYEPTFYGRL 476

Query: 1773 XXXXXXXFDASMLILKFAEAGMLREGIIIGILMDTQPLPIIRPFGQEALFSKFTDNYYNQ 1594
                   FDAS ++LKF + G+LREGI+IGILMD QP PI+ PFG+E LF+++  +YY  
Sbjct: 477  LASFPLSFDASFIVLKFGDVGLLREGILIGILMDIQPQPILHPFGEEHLFAEYAYHYYGG 536

Query: 1593 DDKLTGLMGRKEVIFMANFCAFQFWQHTFQDNLRLEQLKQFLKFDEKADTQISSLKMEEE 1414
            D      +GRKE+I M N CA++FWQ  F+D  RLE LK+   FDE         K+EEE
Sbjct: 537  DCNNMVRIGRKEMILMGNLCAYKFWQRVFKDRHRLEHLKRLSTFDEMKAVTSLLPKIEEE 596

Query: 1413 WCXXXXXXXXXXXXXXXIYESVLSSVHRYRPKFLATSNGVPTYYASNEFQHTCLLMVEQK 1234
            WC               IYE +LSS+HR+RP+FL   +G+PTYY   EF H CLL  +Q 
Sbjct: 597  WCSFHNLVWSSLHQVSEIYEDILSSLHRFRPRFLGKCDGLPTYYDPYEFGHVCLLKSQQN 656

Query: 1233 EXXXXXXXXXXXXXNPICEIKKCIALPFVDANGFNKNLVAFRLANSVKEIRRCYLEG--- 1063
            E              P  EIKKC A+PFVD+  F    VA +L   VKE+ +        
Sbjct: 657  E-DIVVVAADDEHQEPSSEIKKCCAVPFVDSGHFQTINVAEKLLTIVKEVNKLCTGNDSS 715

Query: 1062 -ISGNLEGISGNQQNSD-SYNGVEVSQCRYFVSGACNKGSQCFYSHSLDAKRPVCKFFLS 889
             ++G+  G      N D S+   E   C YFV+G+CNKGSQC +SHSL AK+P C++F +
Sbjct: 716  YVNGDPSGNDAGYVNEDVSHVNEEAPLCVYFVNGSCNKGSQCSFSHSLQAKKPACRYFFT 775

Query: 888  LQGCRNGNSCYFXXXXXXXXXXXSGRGVCVXXXXXXXXXXXXXLFPNPEDGCVLLLDDFD 709
            LQGCRNG SC F                C              LFP   DGC+LLL+D D
Sbjct: 776  LQGCRNGESCSF-SHDIGSSVSSCSPAPCPPEDDDVNAVSLLQLFPTSSDGCILLLEDSD 834

Query: 708  IQFSTNFARFYDPSSIVCTT--SAVKSSDASLTDIRILWGLSHPYETIIPKAAKNTIPWD 535
            + FS NFA FYDPS I+ TT  S    +D SL  +RILW    P  TII KA +N IPW 
Sbjct: 835  LHFSLNFACFYDPSKIISTTCMSETSLNDPSLNGVRILWEFRDPCRTIISKAGRNLIPWS 894

Query: 534  EVKCVVWIPMFGNDVENRDEEKDLIKTFFQYLAIRIMGDALYEVQVILVMNNLLFAQLQV 355
            EVKC++W P F +  EN + +K L++ FF YLA RI+ D+LYE+++I+ MNN+ FAQLQV
Sbjct: 895  EVKCILWFPSFASQSENLEGQKILVQNFFDYLASRIIADSLYELRIIITMNNVRFAQLQV 954

Query: 354  ESLGRENFFYLRESFAFDEYSFGKLSDTFSTKRPMLVSKAVVYAFDLHPPIDVHFDDYAA 175
            E LGRE+FF+L ESF FDE SFG+L+D   T++PM  SKA+ Y FDL PP D+ FDDYAA
Sbjct: 955  EKLGRESFFFLGESFPFDEASFGELADGVRTRKPMPASKAISYVFDLQPPTDIQFDDYAA 1014

Query: 174  VFHNKLHNIS 145
              H  LH+++
Sbjct: 1015 TLHKCLHDVN 1024


>emb|CBI36846.3| unnamed protein product [Vitis vinifera]
          Length = 1007

 Score = 1123 bits (2904), Expect = 0.0
 Identities = 589/1020 (57%), Positives = 722/1020 (70%), Gaps = 7/1020 (0%)
 Frame = -3

Query: 3192 MAVPSNSTDFQSSSENFRNLPIMSIRSKIVEKIMENRVTLIVGETGCGKSSQVPQFLLGE 3013
            MA  S+S +    S +F  LP+M++R KIVEKIMENRVTLIVGETGCGKSSQVPQFLL E
Sbjct: 1    MAESSSSCESSDYSADFSTLPVMALRKKIVEKIMENRVTLIVGETGCGKSSQVPQFLLEE 60

Query: 3012 NIEPIICTQPRRFXXXXXXXXXXXARNCIIGGEVGYHIGHSKVMSASSKIVFKTAGVLLE 2833
            N+ PI+CTQPRRF           ARN  +GGEVGYHIGHSK++S  SKIVFKTAGVLL+
Sbjct: 61   NMAPILCTQPRRFAVVAVARMVAKARNSEVGGEVGYHIGHSKLLSERSKIVFKTAGVLLD 120

Query: 2832 EMREKGLNALKYKVIILDEVHERSVESDLVLVCVKQFMIKNSGLRVVLMSATADITRYKE 2653
            EMREKG  AL+YKVIILDEVHERSVESDLVLVCVKQFM+++  LRVVLMSATADI RY++
Sbjct: 121  EMREKGSKALEYKVIILDEVHERSVESDLVLVCVKQFMLRDYDLRVVLMSATADIARYRD 180

Query: 2652 YFRDLGRGERVEVLAIPSSSQHTLYQRRVSYLEQVVDXXXXXXXXXXLKYCSGSDPVSSE 2473
            YF+DLGRGERVEVLAIP+SSQ T +QR+VSYLEQV +           +Y SG  P    
Sbjct: 181  YFKDLGRGERVEVLAIPNSSQKTFFQRKVSYLEQVTELLGINSELST-RYLSGPSPSMDN 239

Query: 2472 AIMNDEVHKLIYNLVLHIHKNEPDMEKSILIFLPTYHALEQQWLSLSRFSSAFKIHILHS 2293
            A +  EVHKLI++LVL IHKNE D+EKSIL+FLPTY +LEQQW  L   SS FKIHILH 
Sbjct: 240  ADIKPEVHKLIHDLVLKIHKNELDIEKSILVFLPTYQSLEQQWYLLKPLSSCFKIHILHR 299

Query: 2292 SIDTEQALNAMRISQSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVYWDANRKTESSE 2113
            SIDTEQAL AM+I +SHRKVILATNIAESSVTIPKVAYVIDSCRSLQV+WD+NRK E+SE
Sbjct: 300  SIDTEQALMAMKIWKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDSNRKKEASE 359

Query: 2112 IVWVSESQAEQRRGRTGRTCDGEVYRLVCESFFGQLEKYEAPSILKLSLRQQVLLTTCAE 1933
            + WVS+SQAEQRRGRTGRTCDG+V+RLV  SFF +L+ YE P+IL+LSLRQQVLL  CAE
Sbjct: 360  LTWVSKSQAEQRRGRTGRTCDGQVFRLVTGSFFNKLQDYEPPAILRLSLRQQVLLICCAE 419

Query: 1932 SRAINDPKVLLQKVMDPPRPSVVDDALELLVHIRALEKTSLRGRHEPSFYGRXXXXXXXX 1753
             RAINDPKVLLQK +DPP P VV+DAL  LV I ALEKT  RGR+EPSFYGR        
Sbjct: 420  PRAINDPKVLLQKALDPPDPVVVEDALRFLVRINALEKTLPRGRYEPSFYGRLLASFSLS 479

Query: 1752 FDASMLILKFAEAGMLREGIIIGILMDTQPLPIIRPFGQEALFSKFTDNYYNQDDKLTGL 1573
            FDAS+LILKF + GMLREGI++GILMD QPLPI+ PFG+E L +++TD Y++ D   + L
Sbjct: 480  FDASVLILKFGDIGMLREGILLGILMDIQPLPILHPFGKENLSAQYTDCYFHGDSDKSVL 539

Query: 1572 MGRKEVIFMANFCAFQFWQHTFQDNLRLEQLKQFLKFDEKADT--QISSLKMEEEWCXXX 1399
             G++EV F+AN  AFQFWQ  F+D  RLE+LK+ LK DE   T  Q+   K+EEEWC   
Sbjct: 540  TGKREVAFIANLSAFQFWQRVFKDKHRLERLKKILKLDEMDTTQKQLPLAKIEEEWCTFH 599

Query: 1398 XXXXXXXXXXXXIYESVLSSVHRYRPKFLATSNGVPTYYASNEFQHTCLLMVEQKEXXXX 1219
                        IYE VL+SVHR+RPKFL  S+G P+YY   EF+HTCL+          
Sbjct: 600  MLVQSSLNHVSEIYEDVLNSVHRFRPKFLVKSDGPPSYYEPYEFEHTCLI------TQLP 653

Query: 1218 XXXXXXXXXNPICEIKKCIALPFVDANGFNKNLVAFRLANSVKEIRRCYLEGISGNLEGI 1039
                      P  E +KC+A+PFV  N F  +++A ++A  +KEIR  Y E  S N   +
Sbjct: 654  DGDTDDDQFEPPSEARKCLAVPFVSPNQFQNDIIAEKMALVIKEIRVQYTEKNSSNQHKV 713

Query: 1038 SGNQQNSDSYNGVEVSQCRYFVSGACNKGSQCFYSHSL---DAKRPVCKFFLSLQGCRNG 868
                      N  + S CR+FV+G+CN+G++C +SHSL   + K P CKFF SLQGCRNG
Sbjct: 714  ---------VNDGKASPCRFFVNGSCNRGNKCPFSHSLPVNEVKGPTCKFFFSLQGCRNG 764

Query: 867  NSCYFXXXXXXXXXXXSGRGVCVXXXXXXXXXXXXXLFPNPEDGCVLLLDDFDIQFSTNF 688
            +SC+F           SG G C+              FPN   G VL+LDD D+ F+ N 
Sbjct: 765  DSCFFSHDLDPSVSEFSGSGECLPEDGDADAVLLLQFFPNALGGRVLVLDDTDLHFTINL 824

Query: 687  ARFYDPSSIVCTTSA--VKSSDASLTDIRILWGLSHPYETIIPKAAKNTIPWDEVKCVVW 514
            A  ++P  I+ TT    +   D SLT ++ILWGL  PY+ II    +N IPW+EV+C++W
Sbjct: 825  AHKFNPFKIISTTCLPNISICDPSLTAVKILWGLREPYKAIISTEGENPIPWNEVECILW 884

Query: 513  IPMFGNDVENRDEEKDLIKTFFQYLAIRIMGDALYEVQVILVMNNLLFAQLQVESLGREN 334
             P F +   N + +K+LI+ FF+ LA+RI+ DA+Y+VQVIL M N+ F+QLQVE LGR+ 
Sbjct: 885  FPNFESYGGNLEGQKNLIQKFFECLAVRILADAMYQVQVILTMKNIRFSQLQVEKLGRDC 944

Query: 333  FFYLRESFAFDEYSFGKLSDTFSTKRPMLVSKAVVYAFDLHPPIDVHFDDYAAVFHNKLH 154
            FF+L+ SF FDE SFG+L+D  +TK+PMLVS+A  Y F+L PP D+ F DYA  F+ +LH
Sbjct: 945  FFFLKCSFPFDESSFGELTDKVTTKKPMLVSRATSYVFNLQPPTDILFGDYATAFNKRLH 1004


>ref|XP_002267435.2| PREDICTED: zinc finger CCCH domain-containing protein 31 [Vitis
            vinifera]
          Length = 1014

 Score = 1118 bits (2893), Expect = 0.0
 Identities = 587/1020 (57%), Positives = 721/1020 (70%), Gaps = 7/1020 (0%)
 Frame = -3

Query: 3192 MAVPSNSTDFQSSSENFRNLPIMSIRSKIVEKIMENRVTLIVGETGCGKSSQVPQFLLGE 3013
            MA  S+S +    S +F  LP+M++R KIVEKIMENRVTLIVGETGCGKSSQVPQFLL E
Sbjct: 1    MAESSSSCESSDYSADFSTLPVMALRKKIVEKIMENRVTLIVGETGCGKSSQVPQFLLEE 60

Query: 3012 NIEPIICTQPRRFXXXXXXXXXXXARNCIIGGEVGYHIGHSKVMSASSKIVFKTAGVLLE 2833
            N+ PI+CTQPRRF           ARN  +GGEVGYHIGHSK++S  SKIVFKTAGVLL+
Sbjct: 61   NMAPILCTQPRRFAVVAVARMVAKARNSEVGGEVGYHIGHSKLLSERSKIVFKTAGVLLD 120

Query: 2832 EMREKGLNALKYKVIILDEVHERSVESDLVLVCVKQFMIKNSGLRVVLMSATADITRYKE 2653
            EMREKG  AL+YKVIILDEVHERSVESDLVLVCVKQFM+++  LRVVLMSATADI RY++
Sbjct: 121  EMREKGSKALEYKVIILDEVHERSVESDLVLVCVKQFMLRDYDLRVVLMSATADIARYRD 180

Query: 2652 YFRDLGRGERVEVLAIPSSSQHTLYQRRVSYLEQVVDXXXXXXXXXXLKYCSGSDPVSSE 2473
            YF+DLGRGERVEVLAIP+SSQ T +QR+VSYLEQV +           +Y SG  P    
Sbjct: 181  YFKDLGRGERVEVLAIPNSSQKTFFQRKVSYLEQVTELLGINSELST-RYLSGPSPSMDN 239

Query: 2472 AIMNDEVHKLIYNLVLHIHKNEPDMEKSILIFLPTYHALEQQWLSLSRFSSAFKIHILHS 2293
            A +  EVHKLI++LVL IHKNE D+EKSIL+FLPTY +LEQQW  L   SS FKIHILH 
Sbjct: 240  ADIKPEVHKLIHDLVLKIHKNELDIEKSILVFLPTYQSLEQQWYLLKPLSSCFKIHILHR 299

Query: 2292 SIDTEQALNAMRISQSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVYWDANRKTESSE 2113
            SIDTEQAL AM+I +SHRKVILATNIAESSVTIPKVAYVIDSCRSLQV+WD+NRK E+SE
Sbjct: 300  SIDTEQALMAMKIWKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDSNRKKEASE 359

Query: 2112 IVWVSESQAEQRRGRTGRTCDGEVYRLVCESFFGQLEKYEAPSILKLSLRQQVLLTTCAE 1933
            + WVS+SQAEQRRGRTGRTCDG+V+RLV  SFF +L+ YE P+IL+LSLRQQVLL  CAE
Sbjct: 360  LTWVSKSQAEQRRGRTGRTCDGQVFRLVTGSFFNKLQDYEPPAILRLSLRQQVLLICCAE 419

Query: 1932 SRAINDPKVLLQKVMDPPRPSVVDDALELLVHIRALEKTSLRGRHEPSFYGRXXXXXXXX 1753
             RAINDPKVLLQK +DPP P VV+DAL  LV I ALEKT  RGR+EPSFYGR        
Sbjct: 420  PRAINDPKVLLQKALDPPDPVVVEDALRFLVRINALEKTLPRGRYEPSFYGRLLASFSLS 479

Query: 1752 FDASMLILKFAEAGMLREGIIIGILMDTQPLPIIRPFGQEALFSKFTDNYYNQDDKLTGL 1573
            FDAS+LILKF + GMLREGI++GILMD QPLPI+ PFG+E L +++TD Y++ D   + L
Sbjct: 480  FDASVLILKFGDIGMLREGILLGILMDIQPLPILHPFGKENLSAQYTDCYFHGDSDKSVL 539

Query: 1572 MGRKEVIFMANFCAFQFWQHTFQDNLRLEQLKQFLKFDEKADT--QISSLKMEEEWCXXX 1399
             G++EV F+AN  AFQFWQ  F+D  RLE+LK+ LK DE   T  Q+   K+EEEWC   
Sbjct: 540  TGKREVAFIANLSAFQFWQRVFKDKHRLERLKKILKLDEMDTTQKQLPLAKIEEEWCTFH 599

Query: 1398 XXXXXXXXXXXXIYESVLSSVHRYRPKFLATSNGVPTYYASNEFQHTCLLMVEQKEXXXX 1219
                        IYE VL+SVHR+RPKFL  S+G P+YY   EF+HTCL+          
Sbjct: 600  MLVQSSLNHVSEIYEDVLNSVHRFRPKFLVKSDGPPSYYEPYEFEHTCLI------TQLP 653

Query: 1218 XXXXXXXXXNPICEIKKCIALPFVDANGFNKNLVAFRLANSVKEIRRCYLEGISGNLEGI 1039
                      P  E +KC+A+PFV  N F  +++A ++A  +KE+       +    E  
Sbjct: 654  DGDTDDDQFEPPSEARKCLAVPFVSPNQFQNDIIAEKMALVIKEVLLSCASLVVQYTEKN 713

Query: 1038 SGNQQNSDSYNGVEVSQCRYFVSGACNKGSQCFYSHSL---DAKRPVCKFFLSLQGCRNG 868
            S NQ      N  + S CR+FV+G+CN+G++C +SHSL   + K P CKFF SLQGCRNG
Sbjct: 714  SSNQHK--VVNDGKASPCRFFVNGSCNRGNKCPFSHSLPVNEVKGPTCKFFFSLQGCRNG 771

Query: 867  NSCYFXXXXXXXXXXXSGRGVCVXXXXXXXXXXXXXLFPNPEDGCVLLLDDFDIQFSTNF 688
            +SC+F           SG G C+              FPN   G VL+LDD D+ F+ N 
Sbjct: 772  DSCFFSHDLDPSVSEFSGSGECLPEDGDADAVLLLQFFPNALGGRVLVLDDTDLHFTINL 831

Query: 687  ARFYDPSSIVCTTSA--VKSSDASLTDIRILWGLSHPYETIIPKAAKNTIPWDEVKCVVW 514
            A  ++P  I+ TT    +   D SLT ++ILWGL  PY+ II    +N IPW+EV+C++W
Sbjct: 832  AHKFNPFKIISTTCLPNISICDPSLTAVKILWGLREPYKAIISTEGENPIPWNEVECILW 891

Query: 513  IPMFGNDVENRDEEKDLIKTFFQYLAIRIMGDALYEVQVILVMNNLLFAQLQVESLGREN 334
             P F +   N + +K+LI+ FF+ LA+RI+ DA+Y+VQVIL M N+ F+QLQVE LGR+ 
Sbjct: 892  FPNFESYGGNLEGQKNLIQKFFECLAVRILADAMYQVQVILTMKNIRFSQLQVEKLGRDC 951

Query: 333  FFYLRESFAFDEYSFGKLSDTFSTKRPMLVSKAVVYAFDLHPPIDVHFDDYAAVFHNKLH 154
            FF+L+ SF FDE SFG+L+D  +TK+PMLVS+A  Y F+L PP D+ F DYA  F+ +LH
Sbjct: 952  FFFLKCSFPFDESSFGELTDKVTTKKPMLVSRATSYVFNLQPPTDILFGDYATAFNKRLH 1011


>ref|XP_003591531.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
            gi|355480579|gb|AES61782.1| Zinc finger CCCH
            domain-containing protein [Medicago truncatula]
          Length = 1035

 Score = 1074 bits (2777), Expect = 0.0
 Identities = 567/1014 (55%), Positives = 699/1014 (68%), Gaps = 15/1014 (1%)
 Frame = -3

Query: 3144 FRNLPIMSIRSKIVEKIMENRVTLIVGETGCGKSSQVPQFLLGENIEPIICTQPRRFXXX 2965
            F +LP+MS+R KI++KI +NRVTLI+GETGCGKSSQ+PQFLL EN+ PI+CT PRRF   
Sbjct: 27   FSHLPVMSMRKKIIDKIQQNRVTLIIGETGCGKSSQIPQFLLEENMTPILCTLPRRFAVV 86

Query: 2964 XXXXXXXXARNCIIGGEVGYHIGHSKVMSASSKIVFKTAGVLLEEMREKGLNALKYKVII 2785
                    ARNC +G EVGYHIGHS+  SASS+IVFKTAGVLL+EM+EKGL ALKYKVII
Sbjct: 87   SVAKMVAKARNCQLGEEVGYHIGHSRHFSASSEIVFKTAGVLLDEMQEKGLTALKYKVII 146

Query: 2784 LDEVHERSVESDLVLVCVKQFMIKNSGLRVVLMSATADITRYKEYFRDLGRGERVEVLAI 2605
            LDEVHERSVESDLVLVCVKQF++KN+ LRVVLMSATADI+RY++YFRDLGRGERVEVLAI
Sbjct: 147  LDEVHERSVESDLVLVCVKQFLLKNNDLRVVLMSATADISRYRDYFRDLGRGERVEVLAI 206

Query: 2604 PSSSQHTLYQRRVSYLE-----------QVVDXXXXXXXXXXLKYCSGSDPVSSEAIMND 2458
            PSS+Q+ L+QR VSYL+           QV +           KY S  +P  S A +  
Sbjct: 207  PSSNQNMLFQRSVSYLDQALIMVLIFFSQVAETLGITSEIMHSKYSSCLNPSISNAYIKS 266

Query: 2457 EVHKLIYNLVLHIHKNEPDMEKSILIFLPTYHALEQQWLSLSRFSSAFKIHILHSSIDTE 2278
            E+H LI+ LVLHIH+NEPD+EKSIL+FLPTY++LEQQW  L    S F++HILH SIDTE
Sbjct: 267  ELHSLIHELVLHIHENEPDIEKSILVFLPTYYSLEQQWRLLKPLESTFRVHILHGSIDTE 326

Query: 2277 QALNAMRISQSHRK--VILATNIAESSVTIPKVAYVIDSCRSLQVYWDANRKTESSEIVW 2104
            QAL  M+I +SHRK  VILATNIAESSVTIPKVAYVIDSCRSLQVYWD +RK + S +VW
Sbjct: 327  QALMTMKIWKSHRKVVVILATNIAESSVTIPKVAYVIDSCRSLQVYWDKSRKKDCSALVW 386

Query: 2103 VSESQAEQRRGRTGRTCDGEVYRLVCESFFGQLEKYEAPSILKLSLRQQVLLTTCAESRA 1924
            VS+SQA+QR GRTGRTCDG+VYRLV  SF+  LE +E P ILKLSLR Q+L + CA S+A
Sbjct: 387  VSKSQAKQRSGRTGRTCDGQVYRLVPGSFYNDLEDHETPVILKLSLRLQILSSCCAGSKA 446

Query: 1923 INDPKVLLQKVMDPPRPSVVDDALELLVHIRALEKTSLRGRHEPSFYGRXXXXXXXXFDA 1744
            INDPKVLLQK +DPP P +V+DAL LLV + ALEKT  RGR+EP+FYGR        FD+
Sbjct: 447  INDPKVLLQKALDPPDPQIVEDALSLLVQMGALEKTPTRGRYEPTFYGRLLASFSLSFDS 506

Query: 1743 SMLILKFAEAGMLREGIIIGILMDTQPLPIIRPFGQEALFSKFTDNYYNQDDKLTGLMGR 1564
            S+L+LKF + GM+REGI++GI+MDTQPLPII PFG++ LF+K+ D YY      T L GR
Sbjct: 507  SVLVLKFGDIGMIREGILLGIMMDTQPLPIIHPFGEDELFAKYIDCYYGD---RTILAGR 563

Query: 1563 KEVIFMANFCAFQFWQHTFQDNLRLEQLKQFLKFDEKADTQISSLKMEEEWCXXXXXXXX 1384
            KE+ FMANFCAFQFWQH F+D  RLE LKQ LK D+        LK+EE+WC        
Sbjct: 564  KEMEFMANFCAFQFWQHIFKDKYRLEHLKQVLKSDDVYPDTHLMLKLEEDWCFFHNLYQS 623

Query: 1383 XXXXXXXIYESVLSSVHRYRPKFLATSNGVPTYYASNEFQHTCLLMVEQKEXXXXXXXXX 1204
                   IY  +L ++HR+RPKFL++ +G+  YY   EF HTCL    Q +         
Sbjct: 624  SLHQMSEIYNDILYTIHRFRPKFLSSFHGLVPYYDPYEFSHTCLFK-SQPDGHSDVVSVD 682

Query: 1203 XXXXNPICEIKKCIALPFVDANGFNKNLVAFRLANSVKEIRRCYLEGISGNLEGISGNQQ 1024
                 P  + KKC+A+P+V  N  N   VA   A  VKE R  Y +  S +      +  
Sbjct: 683  EEGFEPSNQTKKCVAVPYVTLNHLNSYEVAKMFAAIVKETRAQYPDDSSSH-PPEDADVG 741

Query: 1023 NSDSYNGVEVSQCRYFVSGACNKGSQCFYSHSLDAKRPVCKFFLSLQGCRNGNSCYFXXX 844
            N   Y   EVS C YF+ G+C++G+ C +SH+L AKRP CKFF SLQGCRNG SC F   
Sbjct: 742  NFHVYG--EVSPCVYFMRGSCSRGNSCSFSHTLQAKRPQCKFFFSLQGCRNGGSCLFSHD 799

Query: 843  XXXXXXXXSGRGVCVXXXXXXXXXXXXXLFPNPEDGCVLLLDDFDIQFSTNFARFYDPSS 664
                      + +C              LFP   +  +L+LDD D+ FS+ FA  YDPS 
Sbjct: 800  VDRPAVSAR-KNICRPEDNAMNSASLLNLFPKSSNRSILILDDTDLHFSSCFACHYDPSK 858

Query: 663  IVCTTSAVKS--SDASLTDIRILWGLSHPYETIIPKAAKNTIPWDEVKCVVWIPMFGNDV 490
            I+ TTS  ++  ++ SLT +RILWGL HPY+TII KA ++ IPW+EV+CV+W P F +  
Sbjct: 859  IISTTSLSETTFTEPSLTGVRILWGLYHPYQTIIAKAGRSLIPWNEVQCVLWFPCFDSYG 918

Query: 489  ENRDEEKDLIKTFFQYLAIRIMGDALYEVQVILVMNNLLFAQLQVESLGRENFFYLRESF 310
            E+ D +K  ++ FFQYLA RI+ D L EVQVI+ MNN+ F+QLQVE L R+ FF L ESF
Sbjct: 919  EDLDGKKKALQNFFQYLAFRILADDLQEVQVIITMNNIRFSQLQVEKLARDCFFILTESF 978

Query: 309  AFDEYSFGKLSDTFSTKRPMLVSKAVVYAFDLHPPIDVHFDDYAAVFHNKLHNI 148
            AFDE SFG L D+ + +RPM+VS+++ Y F L PP D    DY A     LH I
Sbjct: 979  AFDEISFGILHDSVTNRRPMVVSRSISYVFSLQPPTDELCGDYVATMKRHLHKI 1032


>ref|NP_182290.1| zinc finger CCCH domain-containing protein 31 [Arabidopsis thaliana]
            gi|75317978|sp|O22243.2|C3H31_ARATH RecName: Full=Zinc
            finger CCCH domain-containing protein 31; Short=AtC3H31
            gi|3738282|gb|AAC63624.1| putative ATP-dependent RNA
            helicase A [Arabidopsis thaliana]
            gi|225898609|dbj|BAH30435.1| hypothetical protein
            [Arabidopsis thaliana] gi|330255781|gb|AEC10875.1| zinc
            finger CCCH domain-containing protein 31 [Arabidopsis
            thaliana]
          Length = 1015

 Score = 1052 bits (2721), Expect = 0.0
 Identities = 536/1023 (52%), Positives = 708/1023 (69%), Gaps = 7/1023 (0%)
 Frame = -3

Query: 3198 LAMAVPSNSTDFQSS----SENFRNLPIMSIRSKIVEKIMENRVTLIVGETGCGKSSQVP 3031
            +A++ P++S+    S    S NF +LPIM+++ +I++KI+ENRVTLIVGE GCGKSSQVP
Sbjct: 1    MAVSSPTSSSSSSESLPLPSSNFASLPIMAMKRRIIDKILENRVTLIVGEPGCGKSSQVP 60

Query: 3030 QFLLGENIEPIICTQPRRFXXXXXXXXXXXARNCIIGGEVGYHIGHSKVMSASSKIVFKT 2851
            QFLL  N+ PI+CTQPRRF           +RN  +GGE+GYHIGHSK+++  SKI+FKT
Sbjct: 61   QFLLEANMAPILCTQPRRFAVVAVAKMVAKSRNSDLGGEIGYHIGHSKILTEGSKILFKT 120

Query: 2850 AGVLLEEMREKGLNALKYKVIILDEVHERSVESDLVLVCVKQFMIKNSGLRVVLMSATAD 2671
            AGVLL+EM +KGLNALKYKVIILDEVHERSVESDLVLVCVKQF++KN+ LRVVLMSATAD
Sbjct: 121  AGVLLDEMLDKGLNALKYKVIILDEVHERSVESDLVLVCVKQFLMKNNDLRVVLMSATAD 180

Query: 2670 ITRYKEYFRDLGRGERVEVLAIPSSSQHTLYQRRVSYLEQVVDXXXXXXXXXXLKYCSGS 2491
            ITRY++YF++LGRGERVEV+AIPS  Q T++QRRV YLEQV              YC G 
Sbjct: 181  ITRYRDYFKELGRGERVEVVAIPSPDQRTIFQRRVLYLEQVAGLLGVSSDLSA--YCPGP 238

Query: 2490 DPVSSEAIMNDEVHKLIYNLVLHIHKNEPDMEKSILIFLPTYHALEQQWLSLSRFSSAFK 2311
             P S++  +  E+  LI++L+L+IH+ EPD+EKSIL+FLPTY++LEQQ+  L  F ++F+
Sbjct: 239  SPSSADTEIKPELQNLIHDLILYIHEKEPDIEKSILVFLPTYYSLEQQYHQLEPFFASFE 298

Query: 2310 IHILHSSIDTEQALNAMRISQSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVYWDANR 2131
            +HILH SIDTEQAL AM+I +S RKVILATNIAESSVTIPKVAYVIDSCRSLQV+WD +R
Sbjct: 299  VHILHRSIDTEQALAAMKICRSRRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDPSR 358

Query: 2130 KTESSEIVWVSESQAEQRRGRTGRTCDGEVYRLVCESFFGQLEKYEAPSILKLSLRQQVL 1951
            K ++ ++VWVS SQAEQRRGRTGRTCDGEVYRLV  +FF +LE++E PSILKLSLRQQVL
Sbjct: 359  KRDAVQLVWVSRSQAEQRRGRTGRTCDGEVYRLVPSAFFNKLEEHEPPSILKLSLRQQVL 418

Query: 1950 LTTCAESRAINDPKVLLQKVMDPPRPSVVDDALELLVHIRALEKTSLRGRHEPSFYGRXX 1771
               C ESRAIND   LL K MDPP P VVDDAL +L+ I+AL K S RGR+EP+FYGR  
Sbjct: 419  HICCTESRAINDANALLAKAMDPPDPDVVDDALRMLLSIQALRK-SPRGRYEPTFYGRLL 477

Query: 1770 XXXXXXFDASMLILKFAEAGMLREGIIIGILMDTQPLPIIRPFGQEALFSKFTDNYYNQD 1591
                  FDAS+L++KF E GMLR+GI++G+LMDT PLPI  PFG ++LF ++ D+Y+   
Sbjct: 478  ASFPLSFDASILVVKFGEMGMLRQGILLGVLMDTLPLPIHHPFGDDSLFLEYVDHYFGGS 537

Query: 1590 DKLTGLMGRKEVIFMANFCAFQFWQHTFQDNLRLEQLKQFLKFDEKADTQISSLKMEEEW 1411
              ++G  GR+E++ MANFCAFQFWQ  F+D  RLE LKQ L  ++  D ++   ++E+EW
Sbjct: 538  KTISG--GRREMVLMANFCAFQFWQRVFKDKHRLENLKQLLSKEKDKDLKLMFPEIEKEW 595

Query: 1410 CXXXXXXXXXXXXXXXIYESVLSSVHRYRPKFLATSNGVPTYYASNEFQHTCLLMVEQKE 1231
            C               +YE  LSS HR+RP+F+++S+  PTYY   EF HTC +  +  E
Sbjct: 596  CDFHNIAQSSFYHVSELYEDTLSSFHRFRPQFISSSDSQPTYYNPYEFDHTCYIECQPSE 655

Query: 1230 XXXXXXXXXXXXXNPICEIKKCIALPFVDANGFNKNLVAFRLANSVKEIRRCYLEGISGN 1051
                          P  E++KC+++PFV  N F  N +A  +A+ +KEIR       S N
Sbjct: 656  DKYLHSEDVDNNQPP-PEVRKCVSVPFVPPNAFQANAIAENMASIIKEIRTQCTPSESDN 714

Query: 1050 LEGISGNQQNSDSYNGVEVSQCRYFVSGACNKGSQCFYSHSLDAKRPVCKFFLSLQGCRN 871
              G     +  D     E   C YF++G CN+G QC ++H+L + RP CKFF S QGCRN
Sbjct: 715  GHGA---LEPEDYVEYGEAPVCVYFLNGYCNRGGQCTFTHTLQSTRPACKFFASSQGCRN 771

Query: 870  GNSCYFXXXXXXXXXXXSGRGVCVXXXXXXXXXXXXXLFPNPEDGCVLLLDDFDIQFSTN 691
            G SC F                C+             LFP   +GC+L+ DD D+ F+++
Sbjct: 772  GESCLFSHAMRRRTTSYLPPPQCLPEEDGSSTSPLLDLFPTSSEGCILVFDDSDMHFTSS 831

Query: 690  FARFYDPSSIVCTTSAVKS--SDASLTDIRILWGLSHPYETIIPKAAK-NTIPWDEVKCV 520
             A  Y    I+ T+S+ ++   D+SL D RI WGL+HPY+TII KA + N IPW+EVKCV
Sbjct: 832  IANRYPSWRILSTSSSSETLFCDSSLADTRIFWGLNHPYQTIISKAGRENPIPWNEVKCV 891

Query: 519  VWIPMFGNDVENRDEEKDLIKTFFQYLAIRIMGDALYEVQVILVMNNLLFAQLQVESLGR 340
            +W     +  +  +++K +++ FF+++AIR++GD LY+++V+L MNN+ F+ LQVE L R
Sbjct: 892  LWFLNPDSYADTPEKQKTILQNFFEHMAIRLLGDKLYKIRVVLTMNNVRFSLLQVEKLAR 951

Query: 339  ENFFYLRESFAFDEYSFGKLSDTFSTKRPMLVSKAVVYAFDLHPPIDVHFDDYAAVFHNK 160
            E+FF+L ESF  D  SFG   DT + ++PMLVS+ + Y F+LHPP D+ F +Y ++    
Sbjct: 952  ESFFFLGESFPHDSESFGAFQDTLTIQKPMLVSRPISYVFNLHPPSDIQFGNYTSLLRKS 1011

Query: 159  LHN 151
            LHN
Sbjct: 1012 LHN 1014