BLASTX nr result

ID: Atractylodes21_contig00004272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00004272
         (918 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268896.2| PREDICTED: E3 ubiquitin-protein ligase UPL1-...   423   e-116
ref|XP_002522774.1| E3 ubiquitin protein ligase upl2, putative [...   385   e-105
ref|XP_002298873.1| predicted protein [Populus trichocarpa] gi|2...   362   5e-98
ref|XP_003524816.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-...   361   1e-97
ref|XP_004166446.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   355   6e-96

>ref|XP_002268896.2| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Vitis vinifera]
          Length = 4116

 Score =  423 bits (1088), Expect = e-116
 Identities = 219/307 (71%), Positives = 248/307 (80%), Gaps = 1/307 (0%)
 Frame = +1

Query: 1    VSELGTSDADVLRDLGATFREILWQQSMCCDSKIDEKQSVESKPEXXXXXXXXXXXXXXX 180
            VSELGT+DADVL+DLG  +REILWQ S+CCDSK+DEK++V+ +PE               
Sbjct: 1240 VSELGTADADVLKDLGKVYREILWQISLCCDSKVDEKKNVDLEPEGTDSATSNAA----- 1294

Query: 181  XXTFGRDVDGVTIPVVRYMNPVSIRNSSHPHSGVEREFLSVVRTNEGFSRRSRHGLSRIR 360
                GR+ D    PVVRYMNPVS+R++SHP  G ER+FLS+VR+ EG +RRSRHGL+RIR
Sbjct: 1295 ----GRESDDDGTPVVRYMNPVSVRSTSHPQWGGERQFLSMVRSGEGLNRRSRHGLTRIR 1350

Query: 361  GGRTGRHLEALQIDSEPLNNTEMTSSQDLKRKSPEVLVLENLNKLASTLRSFFIALVKGF 540
            GGRTGRHLEAL  DSE   N   TSSQDLK+KSP+VLV ENLNKLASTLRSFF ALVKGF
Sbjct: 1351 GGRTGRHLEALNFDSEASANMPETSSQDLKKKSPDVLVSENLNKLASTLRSFFTALVKGF 1410

Query: 541  TSPNRRRGETGSLSAASKSIGTALAKVFLEALSFPGYTTSAGLDTSLSLKCRYLGKVVDH 720
            TSPNRRR ++G+LS+ASKS+GTALAKVFLEALSF GY++S GLD SLS+KCRYLGKVVD 
Sbjct: 1411 TSPNRRRADSGTLSSASKSLGTALAKVFLEALSFSGYSSSNGLDLSLSVKCRYLGKVVDD 1470

Query: 721  IAALTFDNRRRTCYTVMINNFYVQGTFKELLNTFEATSQLLWTLPYSASTSGIDLEK-SE 897
            IA LTFD RRRTCYT M+NNFYV GTFKELL TFEATSQLLWTLPYS  T GID EK  E
Sbjct: 1471 IAVLTFDGRRRTCYTAMVNNFYVHGTFKELLTTFEATSQLLWTLPYSVPTQGIDNEKVGE 1530

Query: 898  GSKLSHS 918
            GSKLSHS
Sbjct: 1531 GSKLSHS 1537


>ref|XP_002522774.1| E3 ubiquitin protein ligase upl2, putative [Ricinus communis]
            gi|223538012|gb|EEF39625.1| E3 ubiquitin protein ligase
            upl2, putative [Ricinus communis]
          Length = 3691

 Score =  385 bits (989), Expect = e-105
 Identities = 201/308 (65%), Positives = 241/308 (78%), Gaps = 2/308 (0%)
 Frame = +1

Query: 1    VSELGTSDADVLRDLGATFREILWQQSMCCDSKIDEKQSVESKPEXXXXXXXXXXXXXXX 180
            VSELGTSDAD+L+DLG T+REI+WQ S+C DSK+DEK+  + + E               
Sbjct: 877  VSELGTSDADILKDLGKTYREIVWQISLCNDSKVDEKRHADQETESADASSSN------- 929

Query: 181  XXTFGRDVDG-VTIPVVRYMNPVSIRNSSHPHSGVEREFLSVVRTNEGFSRRSRHGLSRI 357
                GR+ D    IPVVRY+NPVSIRN +    G EREFLSV+R+ EG  RR+RHG++RI
Sbjct: 930  --VVGRESDDDANIPVVRYLNPVSIRNGTQSFWGGEREFLSVLRSGEGLHRRTRHGIARI 987

Query: 358  RGGRTGRHLEALQIDSEPLNNTEMTSSQDLKRKSPEVLVLENLNKLASTLRSFFIALVKG 537
            RGGRTG+HL++L IDSE   N   TSSQD+K++SP+VLVLENLNKLAST RSFF ALVKG
Sbjct: 988  RGGRTGQHLDSLHIDSEAPPNVPETSSQDVKKRSPDVLVLENLNKLASTSRSFFTALVKG 1047

Query: 538  FTSPNRRRGETGSLSAASKSIGTALAKVFLEALSFPGYTTSAGLDTSLSLKCRYLGKVVD 717
            FTSPNRRR + GSLS+ASK++GTALAK+FLEAL+F GY+TS GLD SLS+KCRYLGK++D
Sbjct: 1048 FTSPNRRRADVGSLSSASKTLGTALAKIFLEALNFSGYSTS-GLDMSLSVKCRYLGKIMD 1106

Query: 718  HIAALTFDNRRRTCYTVMINNFYVQGTFKELLNTFEATSQLLWTLPYSASTSGIDLEKS- 894
             +AALTFD+RRRTCYT M+NNFYV G FKELL TFEATSQLLWTLP+   T   D EK+ 
Sbjct: 1107 DMAALTFDSRRRTCYTAMVNNFYVHGAFKELLTTFEATSQLLWTLPHPFPTPSADNEKAV 1166

Query: 895  EGSKLSHS 918
            EG+KLSHS
Sbjct: 1167 EGNKLSHS 1174


>ref|XP_002298873.1| predicted protein [Populus trichocarpa] gi|222846131|gb|EEE83678.1|
            predicted protein [Populus trichocarpa]
          Length = 3728

 Score =  362 bits (930), Expect = 5e-98
 Identities = 196/308 (63%), Positives = 231/308 (75%), Gaps = 2/308 (0%)
 Frame = +1

Query: 1    VSELGTSDADVLRDLGATFREILWQQSMCCDSKIDEKQSVESKPEXXXXXXXXXXXXXXX 180
            VSELGT+DADVL+DLG  +REI+WQ S+  DSK+DEK+  E + E               
Sbjct: 877  VSELGTADADVLKDLGNAYREIVWQVSLYNDSKVDEKRCAEQETESADVSSSN------- 929

Query: 181  XXTFGRDVDG-VTIPVVRYMNPVSIRNSSHPHSGVEREFLSVVRTNEGFSRRSRHGLSRI 357
                GR+ D    +PVVRYMNPVSIRN S    G EREFLSV+R+ EG  RRSRHGL+RI
Sbjct: 930  --AVGRESDDDANVPVVRYMNPVSIRNGSQSLWGGEREFLSVIRSGEGLHRRSRHGLARI 987

Query: 358  RGGRTGRHLEALQIDSEPLNNTEMTSSQDLKRKSPEVLVLENLNKLASTLRSFFIALVKG 537
            RGGRTGRHL+AL +DSE  ++   TS   LKR++P+    E LNKLAS LR+FF ALVKG
Sbjct: 988  RGGRTGRHLDALSVDSEIPSDEPETSLPKLKRRTPD----EILNKLASILRTFFSALVKG 1043

Query: 538  FTSPNRRRGETGSLSAASKSIGTALAKVFLEALSFPGYTTSAGLDTSLSLKCRYLGKVVD 717
            FT PNRRR + GSLSAASK++GT LAK+FLEALSF GY+T+ GLDTSLS+KCRYLGKVVD
Sbjct: 1044 FTLPNRRRADVGSLSAASKTLGTTLAKIFLEALSFSGYSTT-GLDTSLSVKCRYLGKVVD 1102

Query: 718  HIAALTFDNRRRTCYTVMINNFYVQGTFKELLNTFEATSQLLWTLPYSASTSGIDLEKS- 894
             +AALTFD+RRRTCY  M+NNFYV GTF+ELL TFEATSQLLWTLPY   T  +D EK+ 
Sbjct: 1103 DMAALTFDSRRRTCYAAMVNNFYVHGTFRELLTTFEATSQLLWTLPYPFPTPSVDQEKAG 1162

Query: 895  EGSKLSHS 918
            EG+ LSHS
Sbjct: 1163 EGNNLSHS 1170


>ref|XP_003524816.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Glycine max]
          Length = 3739

 Score =  361 bits (927), Expect = 1e-97
 Identities = 195/308 (63%), Positives = 227/308 (73%), Gaps = 2/308 (0%)
 Frame = +1

Query: 1    VSELGTSDADVLRDLGATFREILWQQSMCCDSKIDEKQSVESKPEXXXXXXXXXXXXXXX 180
            VSEL T DADVL+DLG T++E++WQ S+C DSK + K++ + +PE               
Sbjct: 877  VSELSTLDADVLKDLGKTYKEVIWQISLCNDSKAEGKKNADQEPEVAQVPPSTAVERESD 936

Query: 181  XXTFGRDVDGVTIPVVRYMNPVSIRNSSHPHSGVEREFLSVVRTNEGFSRRSRHGLSRIR 360
                    D   I  VRY NPV  RN SH     EREFLSVVR  E   RRSRHGLSRIR
Sbjct: 937  --------DDSNIQTVRYTNPVFARNGSHSLWSGEREFLSVVRAGESMHRRSRHGLSRIR 988

Query: 361  GGRTGRHLEALQIDSEPLNNT-EMTSSQDLKRKSPEVLVLENLNKLASTLRSFFIALVKG 537
            GGRTGRHLEAL IDSE  ++  E   SQDLK+KSP+VLVLE LNKLASTLRSFF ALVKG
Sbjct: 989  GGRTGRHLEALNIDSEASSSALEAPLSQDLKKKSPDVLVLEILNKLASTLRSFFTALVKG 1048

Query: 538  FTSPNRRRGETGSLSAASKSIGTALAKVFLEALSFPGYTTSAGLDTSLSLKCRYLGKVVD 717
            FTSPNRRR ++GSLS+ASK++G  LA  F EALSF G++T AGL+ SLS+KCRYLGKVVD
Sbjct: 1049 FTSPNRRRADSGSLSSASKTLGAVLATNFFEALSFSGHSTYAGLEMSLSVKCRYLGKVVD 1108

Query: 718  HIAALTFDNRRRTCYTVMINNFYVQGTFKELLNTFEATSQLLWTLPYSASTSGIDL-EKS 894
             +AALTFD+RRR+CYT M+NNFYV GTFKELL TFEATSQLLWTLP S  +S ID+ +K 
Sbjct: 1109 DMAALTFDSRRRSCYTAMVNNFYVHGTFKELLTTFEATSQLLWTLPCSLPSSDIDVGKKG 1168

Query: 895  EGSKLSHS 918
            EG KLSH+
Sbjct: 1169 EGGKLSHN 1176


>ref|XP_004166446.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UPL1-like
            [Cucumis sativus]
          Length = 3692

 Score =  355 bits (912), Expect = 6e-96
 Identities = 187/308 (60%), Positives = 233/308 (75%), Gaps = 2/308 (0%)
 Frame = +1

Query: 1    VSELGTSDADVLRDLGATFREILWQQSMCCDSKIDEKQSVESKPEXXXXXXXXXXXXXXX 180
            +SELG +DAD+L+D+G T+REI+WQ S+   SK D+K+S +  PE               
Sbjct: 876  ISELGIADADILKDIGCTYREIIWQISLDNHSKTDDKKSADQDPESSDATPSN------- 928

Query: 181  XXTFGRDVDGVT-IPVVRYMNPVSIRNSSHPHSGVEREFLSVVRTNEGFSRRSRHGLSRI 357
              T GR+ D  T +PVVRYMNPVS+RN S    G EREFLSVVR++E   RRSRHGL+R+
Sbjct: 929  --TGGRESDDDTNMPVVRYMNPVSLRNGSQTLWGGEREFLSVVRSSESLHRRSRHGLTRL 986

Query: 358  RGGRTGRHLEALQIDSEPLNNTEMTSSQDLKRKSPEVLVLENLNKLASTLRSFFIALVKG 537
            RGGR+GR LE   IDSE     E +S+ +LK+KSPEVLV E LNKL ST+R+FF ALVKG
Sbjct: 987  RGGRSGRQLEPFHIDSEASGILETSSTPELKKKSPEVLVSEILNKLGSTMRAFFTALVKG 1046

Query: 538  FTSPNRRRGETGSLSAASKSIGTALAKVFLEALSFPGYTTSAGLDTSLSLKCRYLGKVVD 717
            FTS NRRR ++GSLS+ASK+IGTAL+K+FL+ALSF G++ S+GLD SL +KCRYLGKVVD
Sbjct: 1047 FTSSNRRRVDSGSLSSASKAIGTALSKIFLDALSFSGHSGSSGLDISLPVKCRYLGKVVD 1106

Query: 718  HIAALTFDNRRRTCYTVMINNFYVQGTFKELLNTFEATSQLLWTLPYSASTSGIDLEK-S 894
             +AALTFD R+RTCY+ M+NNFYV GTFKEL+ TFEATSQLLW+LP+S   S +D E+ +
Sbjct: 1107 DMAALTFDGRKRTCYSAMVNNFYVNGTFKELITTFEATSQLLWSLPFSVQNSAVDHERTN 1166

Query: 895  EGSKLSHS 918
            E S LSHS
Sbjct: 1167 EESNLSHS 1174


Top