BLASTX nr result

ID: Atractylodes21_contig00004270 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00004270
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268896.2| PREDICTED: E3 ubiquitin-protein ligase UPL1-...   144   7e-33
ref|XP_002522774.1| E3 ubiquitin protein ligase upl2, putative [...   133   2e-29
ref|XP_002298873.1| predicted protein [Populus trichocarpa] gi|2...   124   6e-27
ref|XP_003531107.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-...   120   1e-25
ref|XP_002316781.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25

>ref|XP_002268896.2| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Vitis vinifera]
          Length = 4116

 Score =  144 bits (363), Expect = 7e-33
 Identities = 73/92 (79%), Positives = 85/92 (92%)
 Frame = +3

Query: 6    SVSVGPSIAVAFKNFSPHHSASLARALCSFVREHLKLTNELLISLGGMQLAQVEDAKRTK 185
            SVSVG SI+VAF+NFSP HSASLARA+C F+REHLKLTNELL+S+GG QLA+VE+AK+TK
Sbjct: 1155 SVSVGQSISVAFRNFSPQHSASLARAVCLFLREHLKLTNELLLSVGGAQLAEVENAKQTK 1214

Query: 186  VLRCLSSLEGILSLSNSLAKGTTNVVSELGTS 281
            VL+CL+SLEGILSLSN L KGTT VVSELGT+
Sbjct: 1215 VLKCLASLEGILSLSNFLLKGTTTVVSELGTA 1246


>ref|XP_002522774.1| E3 ubiquitin protein ligase upl2, putative [Ricinus communis]
            gi|223538012|gb|EEF39625.1| E3 ubiquitin protein ligase
            upl2, putative [Ricinus communis]
          Length = 3691

 Score =  133 bits (334), Expect = 2e-29
 Identities = 68/92 (73%), Positives = 79/92 (85%)
 Frame = +3

Query: 6    SVSVGPSIAVAFKNFSPHHSASLARALCSFVREHLKLTNELLISLGGMQLAQVEDAKRTK 185
            S S+G SI++AFKNFS  HSASL+RA+CSF+REHLK TNELL+S+GG QLA VE A +TK
Sbjct: 792  SASIGQSISIAFKNFSQQHSASLSRAVCSFLREHLKATNELLVSVGGTQLATVESANQTK 851

Query: 186  VLRCLSSLEGILSLSNSLAKGTTNVVSELGTS 281
            VLR L+SLEG+LSLSN L KGTT VVSELGTS
Sbjct: 852  VLRYLASLEGMLSLSNFLLKGTTTVVSELGTS 883


>ref|XP_002298873.1| predicted protein [Populus trichocarpa] gi|222846131|gb|EEE83678.1|
            predicted protein [Populus trichocarpa]
          Length = 3728

 Score =  124 bits (312), Expect = 6e-27
 Identities = 64/92 (69%), Positives = 75/92 (81%)
 Frame = +3

Query: 6    SVSVGPSIAVAFKNFSPHHSASLARALCSFVREHLKLTNELLISLGGMQLAQVEDAKRTK 185
            S  +G  I+VAFKNFSP HSASLAR++C+F+REHLK TNELL+S+GG  LA VE A + K
Sbjct: 792  STPIGQIISVAFKNFSPQHSASLARSVCAFLREHLKSTNELLVSIGGAHLAVVESANQAK 851

Query: 186  VLRCLSSLEGILSLSNSLAKGTTNVVSELGTS 281
            VLR LSSLEGILSLSN L KG + VVSELGT+
Sbjct: 852  VLRYLSSLEGILSLSNFLLKGNSTVVSELGTA 883


>ref|XP_003531107.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Glycine max]
          Length = 3713

 Score =  120 bits (300), Expect = 1e-25
 Identities = 63/92 (68%), Positives = 75/92 (81%)
 Frame = +3

Query: 6    SVSVGPSIAVAFKNFSPHHSASLARALCSFVREHLKLTNELLISLGGMQLAQVEDAKRTK 185
            S+SVG SI+VAFKNFSP H  SLARA+CSF+REHLK TNE+L  +GG QLA VE AK+TK
Sbjct: 792  SISVGQSISVAFKNFSPQHYVSLARAVCSFLREHLKSTNEILDLVGGTQLALVESAKQTK 851

Query: 186  VLRCLSSLEGILSLSNSLAKGTTNVVSELGTS 281
            VL+ L+SLE +L+LS  L KG+T VVSEL TS
Sbjct: 852  VLKYLASLEAVLTLSVFLLKGSTTVVSELSTS 883


>ref|XP_002316781.1| predicted protein [Populus trichocarpa] gi|222859846|gb|EEE97393.1|
            predicted protein [Populus trichocarpa]
          Length = 3663

 Score =  120 bits (300), Expect = 1e-25
 Identities = 63/92 (68%), Positives = 73/92 (79%)
 Frame = +3

Query: 6    SVSVGPSIAVAFKNFSPHHSASLARALCSFVREHLKLTNELLISLGGMQLAQVEDAKRTK 185
            S S+G  I+VAFKNFS  HSASLARA+C+F+REHLK TNELL+S+ G  L  VE AK+ K
Sbjct: 792  STSIGQIISVAFKNFSHQHSASLARAVCAFLREHLKSTNELLVSVAGTHLGVVESAKQAK 851

Query: 186  VLRCLSSLEGILSLSNSLAKGTTNVVSELGTS 281
            VLR LSSLEGILSLSN L KG +  VSELGT+
Sbjct: 852  VLRYLSSLEGILSLSNFLLKGNSTFVSELGTA 883


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