BLASTX nr result

ID: Atractylodes21_contig00004258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00004258
         (708 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319745.1| chromodomain protein [Populus trichocarpa] g...   144   1e-32
ref|XP_002273726.1| PREDICTED: chromo domain protein LHP1 [Vitis...   137   2e-30
ref|XP_002325456.1| chromo domain protein [Populus trichocarpa] ...   135   6e-30
ref|NP_001234750.1| chromo domain protein LHP1 [Solanum lycopers...   134   1e-29
ref|XP_002523971.1| Heterochromatin protein, putative [Ricinus c...   133   3e-29

>ref|XP_002319745.1| chromodomain protein [Populus trichocarpa]
           gi|222858121|gb|EEE95668.1| chromodomain protein
           [Populus trichocarpa]
          Length = 438

 Score =  144 bits (364), Expect = 1e-32
 Identities = 88/240 (36%), Positives = 132/240 (55%), Gaps = 15/240 (6%)
 Frame = -2

Query: 707 VRRRRIRKGEKQYLIKWRGWPESANTWEPVENLMSCSDVIDAFEEXXXXXXXXXXXXXXX 528
           +RR+R+RKG+ QYLIKWRGWPE+ANTWEP+ENL SCSDVIDAFEE               
Sbjct: 99  IRRKRVRKGQLQYLIKWRGWPETANTWEPLENLQSCSDVIDAFEESLRSGRSSRK----- 153

Query: 527 XSVASTXXXXXXXXXXXXXXSPAATDDIPAVKITIVEEPLSVPSVHSS------------ 384
                                 +A  ++  V+++I ++ L    +++S            
Sbjct: 154 ---RKRKHGAPHTPSKKKQPRSSAVYNVMDVEVSIADKHLPSAPLNNSLLADLPSPSQFI 210

Query: 383 ---NGTENNVGGTSNNATANQSNETGSLMISPQIGERRERNEFDVKLTDLKVASSSNQEN 213
              +G E++ G  +N  T+ Q++E GS+  S  I ER+E NE+D KL++L     +   N
Sbjct: 211 GLGHGGESS-GDVNNIKTSKQTDENGSINGSKHIFERKEDNEYDPKLSELIGTIPNIDVN 269

Query: 212 MSEFAIHIHDDRAAEEVNPIDIRAPNGIPKVDGTEFTRVSPRIGARRRKSGAVKRFKQES 33
            ++F IH  +++A+E     D    NG+PKVD  +  + S   GA++RKSG+VKRFK++S
Sbjct: 270 TNKFTIHFQEEKASE-----DNGIANGLPKVDYVDLVQNSRCTGAKKRKSGSVKRFKKDS 324


>ref|XP_002273726.1| PREDICTED: chromo domain protein LHP1 [Vitis vinifera]
           gi|296090196|emb|CBI40015.3| unnamed protein product
           [Vitis vinifera]
          Length = 424

 Score =  137 bits (346), Expect = 2e-30
 Identities = 91/234 (38%), Positives = 122/234 (52%), Gaps = 2/234 (0%)
 Frame = -2

Query: 707 VRRRRIRKGEKQYLIKWRGWPESANTWEPVENLMSCSDVIDAFEEXXXXXXXXXXXXXXX 528
           +RRRR+RKG+ QYLIKWRGWPE+ANTWEP+ENL +CSDVIDAFE+               
Sbjct: 101 IRRRRVRKGQLQYLIKWRGWPENANTWEPLENLQACSDVIDAFEDRLRSKRNRSSRKRKR 160

Query: 527 XSVASTXXXXXXXXXXXXXXSPAATDDIPAVKITIVEEPLSVPSVHSSNGTE-NNVGGTS 351
            S  S                 +   ++  V   I +E L    V++    +   V G  
Sbjct: 161 KSGGSAQTLPKKKQQR------SGASNVRGVHFRINDEHLLSTHVNTLGHADIEGVNGAV 214

Query: 350 NNA-TANQSNETGSLMISPQIGERRERNEFDVKLTDLKVASSSNQENMSEFAIHIHDDRA 174
           NN     +SNE GS  +S QI +R E N+ D KL +L+    SN+ N ++F I   + +A
Sbjct: 215 NNVEMTKESNENGSGDVSLQIPQREEDNDSDPKLIELR---GSNEGNANKFKIQFQEVKA 271

Query: 173 AEEVNPIDIRAPNGIPKVDGTEFTRVSPRIGARRRKSGAVKRFKQESNSALGND 12
            E   P+     NG  KV+  E  + S R GARRRKSG+VKRF ++      ND
Sbjct: 272 LEGDCPM-----NGHSKVERVEMDQSSRRTGARRRKSGSVKRFTKDLAPCEPND 320


>ref|XP_002325456.1| chromo domain protein [Populus trichocarpa]
           gi|222862331|gb|EEE99837.1| chromo domain protein
           [Populus trichocarpa]
          Length = 435

 Score =  135 bits (341), Expect = 6e-30
 Identities = 86/232 (37%), Positives = 123/232 (53%), Gaps = 7/232 (3%)
 Frame = -2

Query: 707 VRRRRIRKGEKQYLIKWRGWPESANTWEPVENLMSCSDVIDAFEEXXXXXXXXXXXXXXX 528
           +RR+R+RKG+ QYLIKWRGWPE+ANTWEP+ENL SC+DVIDAFEE               
Sbjct: 99  IRRKRVRKGQLQYLIKWRGWPETANTWEPLENLQSCADVIDAFEESLQSGKSFRKRKRKH 158

Query: 527 XSVASTXXXXXXXXXXXXXXSPA----ATDDIPAVKIT---IVEEPLSVPSVHSSNGTEN 369
               +                      A   +P+  ++   + + P  +  + S  G E+
Sbjct: 159 GGPHTQSKKKQSRSSTSYNVLDVEISIADKHLPSAPLSSSLLGDLPSPLQFISSDPGGES 218

Query: 368 NVGGTSNNATANQSNETGSLMISPQIGERRERNEFDVKLTDLKVASSSNQENMSEFAIHI 189
           N G  +N  T  Q +E GS+  S  I  R+E NE+D KL++L+    +   N +  AIH 
Sbjct: 219 N-GEANNVKTFKQIDENGSMNGSKHIFPRKEDNEYDPKLSELRGTIPNIDVNTNNLAIHF 277

Query: 188 HDDRAAEEVNPIDIRAPNGIPKVDGTEFTRVSPRIGARRRKSGAVKRFKQES 33
            +++  E          NG+PKVD  +  + S R GAR+RKSG+VKRFK++S
Sbjct: 278 QEEKTLEGNG-----LANGLPKVD-YDPVQNSQRTGARKRKSGSVKRFKKDS 323


>ref|NP_001234750.1| chromo domain protein LHP1 [Solanum lycopersicum]
           gi|75306057|sp|Q944N1.2|LHP1_SOLLC RecName: Full=Chromo
           domain protein LHP1; AltName: Full=Protein LIKE
           HETEROCHROMATIN PROTEIN 1; AltName: Full=Sl LHP1
           gi|66854107|gb|AAL25116.2|AF428244_1 heterochromatin
           protein 1-like protein [Solanum lycopersicum]
          Length = 399

 Score =  134 bits (338), Expect = 1e-29
 Identities = 88/237 (37%), Positives = 120/237 (50%), Gaps = 5/237 (2%)
 Frame = -2

Query: 707 VRRRRIRKGEKQYLIKWRGWPESANTWEPVENLMSCSDVIDAFEEXXXXXXXXXXXXXXX 528
           VRRRR  KG+  YLIKWRGWPESANTWEP  NL SC+D+IDA+EE               
Sbjct: 98  VRRRRTVKGKVYYLIKWRGWPESANTWEPETNLSSCTDIIDAYEESLKSGKLRRRKRKF- 156

Query: 527 XSVASTXXXXXXXXXXXXXXSPAATDDIPAVKITIVEEPLSVPSVHSSNGTE--NNVGGT 354
                               +P AT + PAVK+ I+EEP   P ++    T+  ++ G  
Sbjct: 157 ----GATQTHPMIKQQRRFSAPVATYNGPAVKVRIIEEPTPSPPLNVLKATDLVDSNGSE 212

Query: 353 SNNATANQSNETGSLMISPQIGERRERNEFDVKLTDLKVASSSNQENMSEFAIHIHDDRA 174
            N+      N  G  +        RE+NE ++KL++LK A+S+N                
Sbjct: 213 LNSKVDEVVNGNGLRL--------REQNELNLKLSELKGATSTNG--------------- 249

Query: 173 AEEVNPIDIRA---PNGIPKVDGTEFTRVSPRIGARRRKSGAVKRFKQESNSALGND 12
               NP+DI      NG PKV+G EF +     GA++RKSG V+RFK+E+ SA+ +D
Sbjct: 250 ----NPVDISGNGLTNGFPKVNGAEFYQSDRCTGAKKRKSGCVRRFKRETTSAVKDD 302


>ref|XP_002523971.1| Heterochromatin protein, putative [Ricinus communis]
           gi|223536698|gb|EEF38339.1| Heterochromatin protein,
           putative [Ricinus communis]
          Length = 462

 Score =  133 bits (335), Expect = 3e-29
 Identities = 84/235 (35%), Positives = 127/235 (54%), Gaps = 10/235 (4%)
 Frame = -2

Query: 707 VRRRRIRKGEKQYLIKWRGWPESANTWEPVENLMSCSDVIDAFEEXXXXXXXXXXXXXXX 528
           +RR+R+RKG+ QYLIKWRGWPE+ANTWEP+ENL SCSDVIDAFEE               
Sbjct: 124 IRRKRVRKGQLQYLIKWRGWPEAANTWEPLENLQSCSDVIDAFEE-SLRSGKSSRKRKRK 182

Query: 527 XSVASTXXXXXXXXXXXXXXSPAATDDIPAVKITIVEEPLSVPSVHSSNGTEN------- 369
             V +T                +A  ++  + I +V++ L   S+++    ++       
Sbjct: 183 YGVTNT-------QPKKKQSRSSAGYNVTGLDINVVDKLLPSASLNNKTSADSLTGSGHQ 235

Query: 368 --NVGGTSNNATANQSNETGSLMISPQIGERRERNEFDVKLTDLK-VASSSNQENMSEFA 198
             N G  S      +++E G +  S Q  ++ E NE+D KL++L+ + S+++    ++  
Sbjct: 236 GENNGDVSIVKIIKKADENGYINGSKQTLDKNEDNEYDPKLSELRGIVSTNDVSADNKLL 295

Query: 197 IHIHDDRAAEEVNPIDIRAPNGIPKVDGTEFTRVSPRIGARRRKSGAVKRFKQES 33
           I+  +D       P      NG+PKVD  +  + S R GA+RRKSG+VKRFK+ES
Sbjct: 296 INFQEDNTPGSDGP-----RNGLPKVDYADAVQNSRRTGAKRRKSGSVKRFKKES 345


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