BLASTX nr result

ID: Atractylodes21_contig00004240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00004240
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002608204.1| ribosomal protein L2 [Carica papaya] gi|1705...   137   9e-31
ref|YP_002608368.1| ribosomal protein L2 [Vitis vinifera] gi|209...   133   1e-29
ref|YP_173485.1| ribosomal protein L2 [Nicotiana tabacum]             129   2e-28
dbj|BAD83551.2| ribosomal protein L2 (mitochondrion) [Nicotiana ...   129   2e-28
ref|YP_003587229.1| ribosomal protein L2 [Citrullus lanatus] gi|...   129   3e-28

>ref|YP_002608204.1| ribosomal protein L2 [Carica papaya] gi|170522383|gb|ACB20493.1|
           ribosomal protein L2 (mitochondrion) [Carica papaya]
          Length = 335

 Score =  137 bits (345), Expect = 9e-31
 Identities = 68/121 (56%), Positives = 87/121 (71%), Gaps = 7/121 (5%)
 Frame = -2

Query: 383 FVPRMKDDVKGNESLSLNEIRKWDEDSIVWAHKMKREAAVSWQSFRQQEMLGLGGVAEHN 204
           F PRMK+ V+G  + SL E+RKW   SI+WAH++KR+AA+SWQSFR+QE LGL G AEHN
Sbjct: 206 FAPRMKEKVRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWQSFRRQETLGLVGAAEHN 265

Query: 203 KSK-------LKPKAMNKERSDEKFTVDRAPVTYILATHQMKVGKMVMNCDSSKRSQNEL 45
           +SK       L  K + +   D    VDRAPVTYI+A+HQ++ GKMVMNCD SK S ++L
Sbjct: 266 ESKPKTDQGSLPAKPIGERPKDRACKVDRAPVTYIIASHQLEAGKMVMNCDWSKPSTSDL 325

Query: 44  L 42
           L
Sbjct: 326 L 326


>ref|YP_002608368.1| ribosomal protein L2 [Vitis vinifera] gi|209954165|emb|CAQ77612.1|
           ribosomal protein L2 [Vitis vinifera]
           gi|239764759|gb|ACS15228.1| ribosomal protein L2 [Vitis
           vinifera]
          Length = 334

 Score =  133 bits (335), Expect = 1e-29
 Identities = 66/120 (55%), Positives = 87/120 (72%), Gaps = 6/120 (5%)
 Frame = -2

Query: 383 FVPRMKDDVKGNESLSLNEIRKWDEDSIVWAHKMKREAAVSWQSFRQQEMLGLGGVAEHN 204
           F PRM++ ++G  + SL E+RKW   SI+WAH++KR+AA+SWQSFR+QE LGL G AEHN
Sbjct: 206 FAPRMREKLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWQSFRRQETLGLVGAAEHN 265

Query: 203 KSKLK------PKAMNKERSDEKFTVDRAPVTYILATHQMKVGKMVMNCDSSKRSQNELL 42
           +SK K       K + +   D    VDRAPVTYI+A+HQ++ GKMVMNCD SK S ++LL
Sbjct: 266 ESKPKTDQGFYSKPIGEGPKDGACKVDRAPVTYIIASHQLEAGKMVMNCDWSKPSTSDLL 325


>ref|YP_173485.1| ribosomal protein L2 [Nicotiana tabacum]
          Length = 331

 Score =  129 bits (324), Expect = 2e-28
 Identities = 65/121 (53%), Positives = 85/121 (70%), Gaps = 7/121 (5%)
 Frame = -2

Query: 383 FVPRMKDDVKGNESLSLNEIRKWDEDSIVWAHKMKREAAVSWQSFRQQEMLGLGGVAEHN 204
           F PRM++ V+G  + SL EIRKW   SI+W H++KR+AA+SWQSFR+QE LGL G +E N
Sbjct: 202 FAPRMREKVRGKNTFSLCEIRKWRTHSILWVHRIKRKAALSWQSFRRQETLGLVGASERN 261

Query: 203 KSK-------LKPKAMNKERSDEKFTVDRAPVTYILATHQMKVGKMVMNCDSSKRSQNEL 45
           +SK       L  K + +   D    VDRAPVTYI+A+HQ++ GKMVMNCD SK S ++L
Sbjct: 262 ESKPKTDQGSLPAKPIGEGLKDGTCKVDRAPVTYIIASHQLEAGKMVMNCDWSKPSTSDL 321

Query: 44  L 42
           L
Sbjct: 322 L 322


>dbj|BAD83551.2| ribosomal protein L2 (mitochondrion) [Nicotiana tabacum]
          Length = 331

 Score =  129 bits (324), Expect = 2e-28
 Identities = 65/121 (53%), Positives = 85/121 (70%), Gaps = 7/121 (5%)
 Frame = -2

Query: 383 FVPRMKDDVKGNESLSLNEIRKWDEDSIVWAHKMKREAAVSWQSFRQQEMLGLGGVAEHN 204
           F PRM++ V+G  + SL EIRKW   SI+W H++KR+AA+SWQSFR+QE LGL G +E N
Sbjct: 202 FAPRMREKVRGKNTFSLCEIRKWRTHSILWVHRIKRKAALSWQSFRRQETLGLVGASERN 261

Query: 203 KSK-------LKPKAMNKERSDEKFTVDRAPVTYILATHQMKVGKMVMNCDSSKRSQNEL 45
           +SK       L  K + +   D    VDRAPVTYI+A+HQ++ GKMVMNCD SK S ++L
Sbjct: 262 ESKPKTDQGSLPAKPIGEGLKDGTCKVDRAPVTYIIASHQLEAGKMVMNCDWSKPSTSDL 321

Query: 44  L 42
           L
Sbjct: 322 L 322


>ref|YP_003587229.1| ribosomal protein L2 [Citrullus lanatus]
           gi|259156783|gb|ACV96645.1| ribosomal protein L2
           [Citrullus lanatus]
          Length = 332

 Score =  129 bits (323), Expect = 3e-28
 Identities = 64/121 (52%), Positives = 86/121 (71%), Gaps = 7/121 (5%)
 Frame = -2

Query: 383 FVPRMKDDVKGNESLSLNEIRKWDEDSIVWAHKMKREAAVSWQSFRQQEMLGLGGVAEHN 204
           F PRM+D ++G  + SL E+RKW   SI+WAH++KR+AA+SW+SFR+QE LGL G AEHN
Sbjct: 203 FAPRMRDKLRGKNTFSLCEVRKWRTHSILWAHRIKRKAALSWRSFRRQETLGLVGGAEHN 262

Query: 203 KSK-------LKPKAMNKERSDEKFTVDRAPVTYILATHQMKVGKMVMNCDSSKRSQNEL 45
           +SK       L  K + +   D    V+RAPVTY++A HQ++ GKMVMNCD SK S ++L
Sbjct: 263 ESKPETDQGSLPAKPIGEGPKDGACKVNRAPVTYLIACHQLEAGKMVMNCDWSKPSTSDL 322

Query: 44  L 42
           L
Sbjct: 323 L 323


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