BLASTX nr result

ID: Atractylodes21_contig00004223 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00004223
         (1312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB86262.1| unknown [Solanum tuberosum]                            437   e-120
ref|XP_002285426.1| PREDICTED: heterogeneous nuclear ribonucleop...   341   3e-91
ref|XP_002513501.1| heterogeneous nuclear ribonucleoprotein, put...   340   4e-91
ref|XP_004142112.1| PREDICTED: heterogeneous nuclear ribonucleop...   328   2e-87
ref|XP_002313339.1| predicted protein [Populus trichocarpa] gi|2...   324   3e-86

>gb|ABB86262.1| unknown [Solanum tuberosum]
          Length = 364

 Score =  437 bits (1125), Expect = e-120
 Identities = 228/370 (61%), Positives = 272/370 (73%), Gaps = 11/370 (2%)
 Frame = -1

Query: 1204 MFYRGKYVDVGDGREMGLKRQRVIDQGXXXXXXXXXXXXXXXXXXXXYV------NQPPA 1043
            M+YRG Y+D GD REMG KRQR++DQG                             QPP 
Sbjct: 1    MYYRGNYMDSGDAREMGFKRQRIMDQGSSYYATPPGSSYMYNPPPPPPPPSYSYHGQPPP 60

Query: 1042 FPVVRLRGLPFDCSEADIAEFFHGLDIVDVLFVHRHGKFAGEVYCVLGYAFQVEYALQRN 863
            FPVVRLRGLPFDCSE +IA+F HGLD+VDVL VH+ G+F GE YCVLGY  QV++ALQRN
Sbjct: 61   FPVVRLRGLPFDCSETEIADFLHGLDVVDVLLVHKGGRFTGEAYCVLGYPLQVDFALQRN 120

Query: 862  RQNIGRRYVEVFRSKRQEYYKAIANEVXXXXXXXXXXXXXXXSKASDSGRDNAEHTGVLR 683
            RQNIGRRYVEVFRSK++EYYKAIANEV               ++++D  +   EHTGVL 
Sbjct: 121  RQNIGRRYVEVFRSKKEEYYKAIANEV-----YDSRGGSVPRARSADESKTLPEHTGVLW 175

Query: 682  LRGLPFSANRDDIVDFFNDSVLSEDSIYFTVNSEGRATGEAFVKFASPEDSRAAMVKDGM 503
            LRGLPFSA+++DI+DFF D  L E SI+ T   EGR TGEAFV+FAS +DSRAAM KD M
Sbjct: 176  LRGLPFSASKEDIIDFFKDFELPEKSIHITATFEGRPTGEAFVEFASADDSRAAMAKDRM 235

Query: 502  SLGSRYIELFPSTLEEWEDAASRGRANVPKPCD-----EETTVLRMRGLPFSAGKDDIID 338
            ++G+RYIELF S+ EE E+A SRGR  + KP D     E T++LRMRGLPFSAGKDDI+D
Sbjct: 236  TIGNRYIELFASSSEELEEAVSRGRV-LEKPVDGRDPNEVTSILRMRGLPFSAGKDDIMD 294

Query: 337  FFKEFTLSEDSIHMTFNSEGRPTGEALVEFASLDDSKAALAKDRMTLGSRYIELFMSSPE 158
            FFK+F L+ED+IH+TF S+GRPTGEA VEFAS DD+KAALAKDRMTLGSRY+ELF SS E
Sbjct: 295  FFKDFALTEDAIHVTFLSDGRPTGEAFVEFASTDDAKAALAKDRMTLGSRYVELFPSSIE 354

Query: 157  ELRDAVSRGR 128
            ++  A+SRGR
Sbjct: 355  DMNHAISRGR 364


>ref|XP_002285426.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Vitis
            vinifera]
          Length = 258

 Score =  341 bits (874), Expect = 3e-91
 Identities = 172/259 (66%), Positives = 201/259 (77%)
 Frame = -1

Query: 1204 MFYRGKYVDVGDGREMGLKRQRVIDQGXXXXXXXXXXXXXXXXXXXXYVNQPPAFPVVRL 1025
            MFYRGKY D  DGR+MG KRQR+ DQG                    Y+ QPP FPVVRL
Sbjct: 1    MFYRGKYADGLDGRDMGPKRQRITDQGSSFYGGSPGSNFMYNASPYSYIGQPPPFPVVRL 60

Query: 1024 RGLPFDCSEADIAEFFHGLDIVDVLFVHRHGKFAGEVYCVLGYAFQVEYALQRNRQNIGR 845
            RGLPFDCSEAD+AEFFH LDIVDVLFVH++G+F GE +CVLGY  QVE+ALQRNRQN+GR
Sbjct: 61   RGLPFDCSEADVAEFFHSLDIVDVLFVHKNGRFTGEAFCVLGYPLQVEFALQRNRQNMGR 120

Query: 844  RYVEVFRSKRQEYYKAIANEVXXXXXXXXXXXXXXXSKASDSGRDNAEHTGVLRLRGLPF 665
            RYVEVFRSKRQEYYKAIANEV               +K++D G+++AEHTGVLRLRGLPF
Sbjct: 121  RYVEVFRSKRQEYYKAIANEV-SDTRGGSPRRTAPKAKSNDEGKESAEHTGVLRLRGLPF 179

Query: 664  SANRDDIVDFFNDSVLSEDSIYFTVNSEGRATGEAFVKFASPEDSRAAMVKDGMSLGSRY 485
            SA+++DI+DFF D VLSEDSI+ TVNSEGR TGEAFV+F + EDS+AAM KD M+LGSRY
Sbjct: 180  SASKEDIMDFFKDFVLSEDSIHMTVNSEGRPTGEAFVEFTNAEDSKAAMAKDRMTLGSRY 239

Query: 484  IELFPSTLEEWEDAASRGR 428
            IELFPS+LEE ++A +RGR
Sbjct: 240  IELFPSSLEELDEAVARGR 258



 Score =  184 bits (468), Expect = 3e-44
 Identities = 108/205 (52%), Positives = 135/205 (65%), Gaps = 17/205 (8%)
 Frame = -1

Query: 691 VLRLRGLPFSANRDDIVDFFNDSVLSEDSIYFTVNSEGRATGEAFVKFASPEDSRAAMVK 512
           V+RLRGLPF  +  D+ +FF+   L    + F V+  GR TGEAF     P     A+ +
Sbjct: 57  VVRLRGLPFDCSEADVAEFFHS--LDIVDVLF-VHKNGRFTGEAFCVLGYPLQVEFALQR 113

Query: 511 DGMSLGSRYIELFPSTLEEW------EDAASRG---RANVPKPCD--------EETTVLR 383
           +  ++G RY+E+F S  +E+      E + +RG   R   PK           E T VLR
Sbjct: 114 NRQNMGRRYVEVFRSKRQEYYKAIANEVSDTRGGSPRRTAPKAKSNDEGKESAEHTGVLR 173

Query: 382 MRGLPFSAGKDDIIDFFKEFTLSEDSIHMTFNSEGRPTGEALVEFASLDDSKAALAKDRM 203
           +RGLPFSA K+DI+DFFK+F LSEDSIHMT NSEGRPTGEA VEF + +DSKAA+AKDRM
Sbjct: 174 LRGLPFSASKEDIMDFFKDFVLSEDSIHMTVNSEGRPTGEAFVEFTNAEDSKAAMAKDRM 233

Query: 202 TLGSRYIELFMSSPEELRDAVSRGR 128
           TLGSRYIELF SS EEL +AV+RGR
Sbjct: 234 TLGSRYIELFPSSLEELDEAVARGR 258


>ref|XP_002513501.1| heterogeneous nuclear ribonucleoprotein, putative [Ricinus communis]
            gi|223547409|gb|EEF48904.1| heterogeneous nuclear
            ribonucleoprotein, putative [Ricinus communis]
          Length = 260

 Score =  340 bits (873), Expect = 4e-91
 Identities = 171/261 (65%), Positives = 202/261 (77%)
 Frame = -1

Query: 1210 NKMFYRGKYVDVGDGREMGLKRQRVIDQGXXXXXXXXXXXXXXXXXXXXYVNQPPAFPVV 1031
            ++MFYRG+Y D GDGREMG KRQR++DQG                    YV QPP FPVV
Sbjct: 2    DRMFYRGRYPDGGDGREMGAKRQRLVDQGPSYYGTSPGPSFMYNPPPYGYVAQPPPFPVV 61

Query: 1030 RLRGLPFDCSEADIAEFFHGLDIVDVLFVHRHGKFAGEVYCVLGYAFQVEYALQRNRQNI 851
            RLRGLPFDC+E D+AEFFHGLDIVDVLFVH+ GKF GE +CVLG   QV++ALQ+NRQN+
Sbjct: 62   RLRGLPFDCTETDVAEFFHGLDIVDVLFVHKGGKFTGEAFCVLGCPLQVDFALQKNRQNM 121

Query: 850  GRRYVEVFRSKRQEYYKAIANEVXXXXXXXXXXXXXXXSKASDSGRDNAEHTGVLRLRGL 671
            GRRYVEVFRSKRQ+YYKAIANEV               +K+ D G+D+AEHTGVLRLRGL
Sbjct: 122  GRRYVEVFRSKRQDYYKAIANEV--SDARGGSPRRAPRAKSYDEGKDSAEHTGVLRLRGL 179

Query: 670  PFSANRDDIVDFFNDSVLSEDSIYFTVNSEGRATGEAFVKFASPEDSRAAMVKDGMSLGS 491
            PFSA +DDI++FF D VLSEDS++ T+NSEGR TGEAFV+FAS EDS+AAM KD M+LGS
Sbjct: 180  PFSAGKDDIMEFFKDFVLSEDSVHITMNSEGRPTGEAFVEFASAEDSKAAMAKDRMTLGS 239

Query: 490  RYIELFPSTLEEWEDAASRGR 428
            RYIELFPS++EE E+A +RGR
Sbjct: 240  RYIELFPSSIEELEEAVTRGR 260



 Score =  186 bits (473), Expect = 9e-45
 Identities = 107/204 (52%), Positives = 133/204 (65%), Gaps = 16/204 (7%)
 Frame = -1

Query: 691 VLRLRGLPFSANRDDIVDFFNDSVLSEDSIYFTVNSEGRATGEAFVKFASPEDSRAAMVK 512
           V+RLRGLPF     D+ +FF+   L    + F V+  G+ TGEAF     P     A+ K
Sbjct: 60  VVRLRGLPFDCTETDVAEFFHG--LDIVDVLF-VHKGGKFTGEAFCVLGCPLQVDFALQK 116

Query: 511 DGMSLGSRYIELFPSTLEEWEDA----ASRGRANVP------------KPCDEETTVLRM 380
           +  ++G RY+E+F S  +++  A     S  R   P            K   E T VLR+
Sbjct: 117 NRQNMGRRYVEVFRSKRQDYYKAIANEVSDARGGSPRRAPRAKSYDEGKDSAEHTGVLRL 176

Query: 379 RGLPFSAGKDDIIDFFKEFTLSEDSIHMTFNSEGRPTGEALVEFASLDDSKAALAKDRMT 200
           RGLPFSAGKDDI++FFK+F LSEDS+H+T NSEGRPTGEA VEFAS +DSKAA+AKDRMT
Sbjct: 177 RGLPFSAGKDDIMEFFKDFVLSEDSVHITMNSEGRPTGEAFVEFASAEDSKAAMAKDRMT 236

Query: 199 LGSRYIELFMSSPEELRDAVSRGR 128
           LGSRYIELF SS EEL +AV+RGR
Sbjct: 237 LGSRYIELFPSSIEELEEAVTRGR 260


>ref|XP_004142112.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Cucumis
            sativus] gi|449502606|ref|XP_004161690.1| PREDICTED: LOW
            QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein
            F-like [Cucumis sativus]
          Length = 260

 Score =  328 bits (840), Expect = 2e-87
 Identities = 165/259 (63%), Positives = 195/259 (75%)
 Frame = -1

Query: 1204 MFYRGKYVDVGDGREMGLKRQRVIDQGXXXXXXXXXXXXXXXXXXXXYVNQPPAFPVVRL 1025
            MFYRG Y D GDGREMG KRQR++DQG                    YVNQPP FPVVRL
Sbjct: 3    MFYRGSYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVNQPPPFPVVRL 62

Query: 1024 RGLPFDCSEADIAEFFHGLDIVDVLFVHRHGKFAGEVYCVLGYAFQVEYALQRNRQNIGR 845
            RGLPFDC E D+ EFFHGLDIVD+LFVH++GKF GE +CVLGY  QV++ALQRNRQN+GR
Sbjct: 63   RGLPFDCMETDVVEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGR 122

Query: 844  RYVEVFRSKRQEYYKAIANEVXXXXXXXXXXXXXXXSKASDSGRDNAEHTGVLRLRGLPF 665
            RYVE+FRS RQEYYKA+ANEV               SK +D  +D+AEHTGVLRLRGLP+
Sbjct: 123  RYVEIFRSNRQEYYKAVANEV-FDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPY 181

Query: 664  SANRDDIVDFFNDSVLSEDSIYFTVNSEGRATGEAFVKFASPEDSRAAMVKDGMSLGSRY 485
            SA +DDI+DFF    LSEDSI+ T+NSEGR +GEAFV+F++ +DS+AAM KD M+LGSRY
Sbjct: 182  SAGKDDILDFFKGFNLSEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRY 241

Query: 484  IELFPSTLEEWEDAASRGR 428
            IELFPS+ EE ++A SRGR
Sbjct: 242  IELFPSSHEELDEAISRGR 260



 Score =  181 bits (459), Expect = 4e-43
 Identities = 106/205 (51%), Positives = 134/205 (65%), Gaps = 17/205 (8%)
 Frame = -1

Query: 691 VLRLRGLPFSANRDDIVDFFNDSVLSEDSIYFTVNSEGRATGEAFVKFASPEDSRAAMVK 512
           V+RLRGLPF     D+V+FF+   L    I F V+  G+ TGE F     P     A+ +
Sbjct: 59  VVRLRGLPFDCMETDVVEFFHG--LDIVDILF-VHKNGKFTGEGFCVLGYPLQVDFALQR 115

Query: 511 DGMSLGSRYIELFPSTLEEWEDAAS------RG---RANVP--------KPCDEETTVLR 383
           +  ++G RY+E+F S  +E+  A +      RG   R + P        K   E T VLR
Sbjct: 116 NRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLR 175

Query: 382 MRGLPFSAGKDDIIDFFKEFTLSEDSIHMTFNSEGRPTGEALVEFASLDDSKAALAKDRM 203
           +RGLP+SAGKDDI+DFFK F LSEDSIH+T NSEGRP+GEA VEF++  DSKAA++KDRM
Sbjct: 176 LRGLPYSAGKDDILDFFKGFNLSEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRM 235

Query: 202 TLGSRYIELFMSSPEELRDAVSRGR 128
           TLGSRYIELF SS EEL +A+SRGR
Sbjct: 236 TLGSRYIELFPSSHEELDEAISRGR 260


>ref|XP_002313339.1| predicted protein [Populus trichocarpa] gi|222849747|gb|EEE87294.1|
            predicted protein [Populus trichocarpa]
          Length = 253

 Score =  324 bits (831), Expect = 3e-86
 Identities = 166/259 (64%), Positives = 197/259 (76%)
 Frame = -1

Query: 1204 MFYRGKYVDVGDGREMGLKRQRVIDQGXXXXXXXXXXXXXXXXXXXXYVNQPPAFPVVRL 1025
            MFYRG      DGREMG KRQR+ D+G                    Y +QPP FPVVRL
Sbjct: 1    MFYRG----YPDGREMGAKRQRIADKGPSFYANSPGSSFMYNAPPNGYASQPPHFPVVRL 56

Query: 1024 RGLPFDCSEADIAEFFHGLDIVDVLFVHRHGKFAGEVYCVLGYAFQVEYALQRNRQNIGR 845
            RGLPFDC+E D+AEFFHGLDIVDVLFVH+ GKF+GE +CVLGY  QV++ALQ+NRQN+GR
Sbjct: 57   RGLPFDCTETDVAEFFHGLDIVDVLFVHKGGKFSGEAFCVLGYPLQVDFALQKNRQNMGR 116

Query: 844  RYVEVFRSKRQEYYKAIANEVXXXXXXXXXXXXXXXSKASDSGRDNAEHTGVLRLRGLPF 665
            RYVEVFRSKRQ+YYK IANEV               +K+ D G+D+AEHTGVLRLRGLPF
Sbjct: 117  RYVEVFRSKRQDYYKTIANEV--SESRGSPRRNIPRAKSYDEGKDSAEHTGVLRLRGLPF 174

Query: 664  SANRDDIVDFFNDSVLSEDSIYFTVNSEGRATGEAFVKFASPEDSRAAMVKDGMSLGSRY 485
            SA++DDI++FF D VLSEDSI+ T+NSEGR TGEAFV+FA+ EDS+AAM KD M+LGSRY
Sbjct: 175  SASKDDIMEFFKDFVLSEDSIHITMNSEGRPTGEAFVEFANAEDSKAAMAKDRMTLGSRY 234

Query: 484  IELFPSTLEEWEDAASRGR 428
            IELFPS++EE ++A SRGR
Sbjct: 235  IELFPSSVEESDEAVSRGR 253



 Score =  186 bits (473), Expect = 9e-45
 Identities = 109/207 (52%), Positives = 137/207 (66%), Gaps = 16/207 (7%)
 Frame = -1

Query: 700 HTGVLRLRGLPFSANRDDIVDFFNDSVLSEDSIYFTVNSEGRATGEAFVKFASPEDSRAA 521
           H  V+RLRGLPF     D+ +FF+   L    + F V+  G+ +GEAF     P     A
Sbjct: 50  HFPVVRLRGLPFDCTETDVAEFFHG--LDIVDVLF-VHKGGKFSGEAFCVLGYPLQVDFA 106

Query: 520 MVKDGMSLGSRYIELFPSTLEEW------EDAASRG--RANVP--------KPCDEETTV 389
           + K+  ++G RY+E+F S  +++      E + SRG  R N+P        K   E T V
Sbjct: 107 LQKNRQNMGRRYVEVFRSKRQDYYKTIANEVSESRGSPRRNIPRAKSYDEGKDSAEHTGV 166

Query: 388 LRMRGLPFSAGKDDIIDFFKEFTLSEDSIHMTFNSEGRPTGEALVEFASLDDSKAALAKD 209
           LR+RGLPFSA KDDI++FFK+F LSEDSIH+T NSEGRPTGEA VEFA+ +DSKAA+AKD
Sbjct: 167 LRLRGLPFSASKDDIMEFFKDFVLSEDSIHITMNSEGRPTGEAFVEFANAEDSKAAMAKD 226

Query: 208 RMTLGSRYIELFMSSPEELRDAVSRGR 128
           RMTLGSRYIELF SS EE  +AVSRGR
Sbjct: 227 RMTLGSRYIELFPSSVEESDEAVSRGR 253


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