BLASTX nr result

ID: Atractylodes21_contig00004192 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00004192
         (225 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523968.1| interferon-induced GTP-binding protein mx, p...    64   2e-08
ref|XP_002468149.1| hypothetical protein SORBIDRAFT_01g040460 [S...    60   2e-07
ref|XP_003561799.1| PREDICTED: uncharacterized protein LOC100838...    60   2e-07
ref|XP_002888139.1| dynamin family protein [Arabidopsis lyrata s...    59   4e-07
ref|XP_002304086.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07

>ref|XP_002523968.1| interferon-induced GTP-binding protein mx, putative [Ricinus
           communis] gi|223536695|gb|EEF38336.1| interferon-induced
           GTP-binding protein mx, putative [Ricinus communis]
          Length = 667

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/39 (76%), Positives = 34/39 (87%)
 Frame = -2

Query: 119 VIHSPLVSSYNDKIRPILDAVDKLRRLKVTQEGIPLPTI 3
           VIH P+VSSYND+IRP+LDAVDKLR L V +EGI LPTI
Sbjct: 26  VIHVPIVSSYNDRIRPLLDAVDKLRHLMVMKEGIQLPTI 64


>ref|XP_002468149.1| hypothetical protein SORBIDRAFT_01g040460 [Sorghum bicolor]
           gi|241922003|gb|EER95147.1| hypothetical protein
           SORBIDRAFT_01g040460 [Sorghum bicolor]
          Length = 647

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/42 (69%), Positives = 34/42 (80%)
 Frame = -2

Query: 128 AGEVIHSPLVSSYNDKIRPILDAVDKLRRLKVTQEGIPLPTI 3
           A  V  S + +SYND+IRP+LDAVD+LR LKVTQEGI LPTI
Sbjct: 26  ASGVTASAIAASYNDQIRPVLDAVDRLRHLKVTQEGIQLPTI 67


>ref|XP_003561799.1| PREDICTED: uncharacterized protein LOC100838755 [Brachypodium
           distachyon]
          Length = 1404

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/42 (69%), Positives = 34/42 (80%)
 Frame = -2

Query: 128 AGEVIHSPLVSSYNDKIRPILDAVDKLRRLKVTQEGIPLPTI 3
           A  V  S + +SYND+IRP+LDAVD+LR LKVTQEGI LPTI
Sbjct: 756 ASVVTGSAIAASYNDQIRPLLDAVDRLRHLKVTQEGIQLPTI 797


>ref|XP_002888139.1| dynamin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333980|gb|EFH64398.1| dynamin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 659

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/44 (63%), Positives = 34/44 (77%)
 Frame = -2

Query: 134 NNAGEVIHSPLVSSYNDKIRPILDAVDKLRRLKVTQEGIPLPTI 3
           N A   I +P+VSSYND+IRP+LD VD+LR L V +EGI LPTI
Sbjct: 26  NKAVVPIEAPIVSSYNDRIRPLLDTVDRLRNLNVMREGIQLPTI 69


>ref|XP_002304086.1| predicted protein [Populus trichocarpa] gi|222841518|gb|EEE79065.1|
           predicted protein [Populus trichocarpa]
          Length = 667

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/39 (69%), Positives = 34/39 (87%)
 Frame = -2

Query: 119 VIHSPLVSSYNDKIRPILDAVDKLRRLKVTQEGIPLPTI 3
           V H P+VSS+N++IRP+LDAVDKLR L+V +EGI LPTI
Sbjct: 25  VSHVPIVSSFNERIRPLLDAVDKLRHLQVMKEGIQLPTI 63


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