BLASTX nr result

ID: Atractylodes21_contig00004176 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00004176
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515688.1| 60S ribosomal protein L8, putative [Ricinus ...   171   7e-41
ref|XP_002526326.1| 60S ribosomal protein L8, putative [Ricinus ...   169   2e-40
gb|AEX91926.1| ribosomal protein L2, partial [Aegiceras cornicul...   168   5e-40
ref|XP_002283149.1| PREDICTED: 60S ribosomal protein L8 [Vitis v...   167   6e-40
ref|XP_002281476.1| PREDICTED: 60S ribosomal protein L8 [Vitis v...   167   6e-40

>ref|XP_002515688.1| 60S ribosomal protein L8, putative [Ricinus communis]
           gi|223545125|gb|EEF46635.1| 60S ribosomal protein L8,
           putative [Ricinus communis]
          Length = 261

 Score =  171 bits (432), Expect = 7e-41
 Identities = 89/129 (68%), Positives = 95/129 (73%), Gaps = 12/129 (9%)
 Frame = +1

Query: 1   HTHHRKGPARFRTLTSAN------AMVTSRVLSPRTSMILDVV------HLLHQKELFIA 144
           HTHHRKGPARFR+L           +VT  +  P     L  V         HQKELF+A
Sbjct: 19  HTHHRKGPARFRSLDFGERNGYLKGVVTDIIHDPGRGAPLAKVTFRHPFRYKHQKELFVA 78

Query: 145 AEGMYTGQFVLCGKKANLMVGNVLPLRSIPEGAVVCNVEHHVGDRGSFSSASGDYAIVIS 324
           AEGMYTGQFV CGKKANLMVGNVLPLRSIPEGAVVCNVEHHVGDRGSF+  SGDYAIVIS
Sbjct: 79  AEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHVGDRGSFARCSGDYAIVIS 138

Query: 325 HNPDNGTSR 351
           HNPDNGT+R
Sbjct: 139 HNPDNGTTR 147


>ref|XP_002526326.1| 60S ribosomal protein L8, putative [Ricinus communis]
           gi|223534353|gb|EEF36062.1| 60S ribosomal protein L8,
           putative [Ricinus communis]
          Length = 261

 Score =  169 bits (429), Expect = 2e-40
 Identities = 88/129 (68%), Positives = 95/129 (73%), Gaps = 12/129 (9%)
 Frame = +1

Query: 1   HTHHRKGPARFRTLTSAN------AMVTSRVLSPRTSMILDVV------HLLHQKELFIA 144
           HTHHRKGPARFR+L           +VT  +  P     L  V         HQKELF+A
Sbjct: 19  HTHHRKGPARFRSLDFGERNGYLKGVVTDIIHDPGRGAPLAKVTFRHPFRYKHQKELFVA 78

Query: 145 AEGMYTGQFVLCGKKANLMVGNVLPLRSIPEGAVVCNVEHHVGDRGSFSSASGDYAIVIS 324
           AEGMYTGQFV CGKKANLMVGNVLPLRSIPEGAVVCNVEHHVGDRG+F+  SGDYAIVIS
Sbjct: 79  AEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHVGDRGAFARCSGDYAIVIS 138

Query: 325 HNPDNGTSR 351
           HNPDNGT+R
Sbjct: 139 HNPDNGTTR 147


>gb|AEX91926.1| ribosomal protein L2, partial [Aegiceras corniculatum]
          Length = 195

 Score =  168 bits (425), Expect = 5e-40
 Identities = 88/129 (68%), Positives = 94/129 (72%), Gaps = 12/129 (9%)
 Frame = +1

Query: 1   HTHHRKGPARFRTLTSAN------AMVTSRVLSPRTSMILDVV------HLLHQKELFIA 144
           HTHHRKGPAR R+L           ++T  +  P     L  V         HQKELF+A
Sbjct: 4   HTHHRKGPARLRSLDFGERNGYTKGVITEIIHDPGRGAPLARVTFRHPFRYKHQKELFVA 63

Query: 145 AEGMYTGQFVLCGKKANLMVGNVLPLRSIPEGAVVCNVEHHVGDRGSFSSASGDYAIVIS 324
           AEGMYTGQFV CGKKANLMVGNVLPLRSIPEGAVVCNVEHHVGDRG F+ ASGDYAIVIS
Sbjct: 64  AEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARASGDYAIVIS 123

Query: 325 HNPDNGTSR 351
           HNPDNGTSR
Sbjct: 124 HNPDNGTSR 132


>ref|XP_002283149.1| PREDICTED: 60S ribosomal protein L8 [Vitis vinifera]
          Length = 260

 Score =  167 bits (424), Expect = 6e-40
 Identities = 87/129 (67%), Positives = 95/129 (73%), Gaps = 12/129 (9%)
 Frame = +1

Query: 1   HTHHRKGPARFRTLTSAN------AMVTSRVLSPRTSMILDVV------HLLHQKELFIA 144
           HTHHRKGPARFR+L           +VT  +  P     L  V         HQKELF+A
Sbjct: 19  HTHHRKGPARFRSLDFGERNGYLKGVVTDIIHDPGRGAPLARVTFRHPFRYKHQKELFVA 78

Query: 145 AEGMYTGQFVLCGKKANLMVGNVLPLRSIPEGAVVCNVEHHVGDRGSFSSASGDYAIVIS 324
           AEGMYTGQFV CGKKANL+VGNVLP+RSIPEGAVVCNVEHHVGDRG F+ ASGDYAIV+S
Sbjct: 79  AEGMYTGQFVYCGKKANLVVGNVLPVRSIPEGAVVCNVEHHVGDRGVFARASGDYAIVVS 138

Query: 325 HNPDNGTSR 351
           HNPDNGTSR
Sbjct: 139 HNPDNGTSR 147


>ref|XP_002281476.1| PREDICTED: 60S ribosomal protein L8 [Vitis vinifera]
           gi|147864499|emb|CAN80494.1| hypothetical protein
           VITISV_021173 [Vitis vinifera]
          Length = 260

 Score =  167 bits (424), Expect = 6e-40
 Identities = 87/129 (67%), Positives = 95/129 (73%), Gaps = 12/129 (9%)
 Frame = +1

Query: 1   HTHHRKGPARFRTLTSAN------AMVTSRVLSPRTSMILDVV------HLLHQKELFIA 144
           HTHHRKGPARFR+L           +VT  +  P     L  V         HQKELF+A
Sbjct: 19  HTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVTFRHPFRYKHQKELFVA 78

Query: 145 AEGMYTGQFVLCGKKANLMVGNVLPLRSIPEGAVVCNVEHHVGDRGSFSSASGDYAIVIS 324
           AEGMYTGQFV CGKKANL+VGNVLPLRSIPEGAVVCNVEHHVGDRG F+ ASGDY+IV+S
Sbjct: 79  AEGMYTGQFVYCGKKANLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARASGDYSIVVS 138

Query: 325 HNPDNGTSR 351
           HNPDNGTSR
Sbjct: 139 HNPDNGTSR 147


Top