BLASTX nr result

ID: Atractylodes21_contig00004100 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00004100
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_199838.2| FBD domain-containing protein [Arabidopsis thal...    58   7e-07
dbj|BAB09398.1| unnamed protein product [Arabidopsis thaliana]         58   7e-07
sp|Q9FGR8.2|FBD19_ARATH RecName: Full=Putative FBD-associated F-...    58   7e-07
ref|NP_200450.1| putative FBD-associated F-box protein [Arabidop...    57   2e-06
ref|XP_002271158.2| PREDICTED: putative F-box/LRR-repeat protein...    55   5e-06

>ref|NP_199838.2| FBD domain-containing protein [Arabidopsis thaliana]
           gi|332008537|gb|AED95920.1| FBD domain-containing
           protein [Arabidopsis thaliana]
          Length = 381

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
 Frame = -2

Query: 231 ILSRLPSTKSAIRTGTLSKRWKYLWTSVPTLIFCDSANNPPLSNFVSFVDKTLI--QCPQ 58
           +LS LP+ K  + T  LSKRW++LW  VP L++ DS  N     F  FVD++L   + P 
Sbjct: 15  VLSLLPNVKDVVVTMVLSKRWQFLWMMVPKLVYDDSYQNLEYGKFSRFVDRSLFMRKAPG 74

Query: 57  LKIRKFKVSMRC 22
           ++   FK+   C
Sbjct: 75  IETLHFKLGQNC 86


>dbj|BAB09398.1| unnamed protein product [Arabidopsis thaliana]
          Length = 423

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
 Frame = -2

Query: 231 ILSRLPSTKSAIRTGTLSKRWKYLWTSVPTLIFCDSANNPPLSNFVSFVDKTLI--QCPQ 58
           +LS LP+ K  + T  LSKRW++LW  VP L++ DS  N     F  FVD++L   + P 
Sbjct: 15  VLSLLPNVKDVVVTMVLSKRWQFLWMMVPKLVYDDSYQNLEYGKFSRFVDRSLFMRKAPG 74

Query: 57  LKIRKFKVSMRC 22
           ++   FK+   C
Sbjct: 75  IETLHFKLGQNC 86


>sp|Q9FGR8.2|FBD19_ARATH RecName: Full=Putative FBD-associated F-box protein At5g50270
          Length = 408

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
 Frame = -2

Query: 231 ILSRLPSTKSAIRTGTLSKRWKYLWTSVPTLIFCDSANNPPLSNFVSFVDKTLI--QCPQ 58
           +LS LP+ K  + T  LSKRW++LW  VP L++ DS  N     F  FVD++L   + P 
Sbjct: 15  VLSLLPNVKDVVVTMVLSKRWQFLWMMVPKLVYDDSYQNLEYGKFSRFVDRSLFMRKAPG 74

Query: 57  LKIRKFKVSMRC 22
           ++   FK+   C
Sbjct: 75  IETLHFKLGQNC 86


>ref|NP_200450.1| putative FBD-associated F-box protein [Arabidopsis thaliana]
           gi|75262702|sp|Q9FM92.1|FBD22_ARATH RecName:
           Full=Putative FBD-associated F-box protein At5g56390
           gi|10177838|dbj|BAB11267.1| unnamed protein product
           [Arabidopsis thaliana] gi|332009376|gb|AED96759.1|
           putative FBD-associated F-box protein [Arabidopsis
           thaliana]
          Length = 428

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
 Frame = -2

Query: 231 ILSRLPSTKSAIRTGTLSKRWKYLWTSVPTLIFCDSANNPPLSNFVSFVDKTLI--QCPQ 58
           ILS LP+ K  + T  LSKRW+YLW  VP+L++ DS  +     F  FVD++L   + P 
Sbjct: 15  ILSLLPNAKDVVATMVLSKRWRYLWMMVPSLVYDDSYQDIDYGRFSRFVDRSLALHKAPV 74

Query: 57  LKIRKFKVSMRC 22
           +    FK+   C
Sbjct: 75  IDTLHFKLGHIC 86


>ref|XP_002271158.2| PREDICTED: putative F-box/LRR-repeat protein At3g18150-like [Vitis
           vinifera]
          Length = 665

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
 Frame = -2

Query: 231 ILSRLPSTKSAIRTGTLSKRWKYLWTSVPTLIFCDSANNPPLSNFVSFVDKT-LIQCPQL 55
           ILS LP   +AIRTG LSKR+ Y W S P L+F D  +   + +F++FV++  L+  P  
Sbjct: 48  ILSFLPMD-AAIRTGVLSKRFAYKWASTPNLVF-DQDSEWEIDDFITFVNRALLLHDPNC 105

Query: 54  KIRKFKVSMRC 22
           K++KF + M C
Sbjct: 106 KVQKFTIYMDC 116


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