BLASTX nr result

ID: Atractylodes21_contig00004099 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00004099
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein...    75   6e-12
emb|CAN78503.1| hypothetical protein VITISV_023071 [Vitis vinifera]    75   6e-12
emb|CBI23315.3| unnamed protein product [Vitis vinifera]               74   1e-11
ref|XP_002300142.1| f-box family protein [Populus trichocarpa] g...    64   1e-08
ref|XP_002894201.1| hypothetical protein ARALYDRAFT_314380 [Arab...    62   5e-08

>ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein At5g02930-like [Vitis
           vinifera]
          Length = 610

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 39/94 (41%), Positives = 58/94 (61%)
 Frame = -2

Query: 322 LSRLPSTENAIRTGTLSKRWKYLWTSVPTLIFEHKYDKRPQSDIVLFVSKTLIQCRQLKL 143
           LS LP  +  + T  LSKRW++LWT VP L+F  +   R     V  + KTL+  +  ++
Sbjct: 88  LSFLPM-KYVVATSILSKRWQFLWTMVPNLVFRFR---RRDEHFVNSIDKTLVLHQNSQI 143

Query: 142 RKFVVSIEYDIRFESLVNMWIRYAMIRNVEELDL 41
           +KF++   Y  +F+S VN+WIR+A  +NVEEL L
Sbjct: 144 KKFLIDFTYQSQFQSSVNVWIRHATRKNVEELHL 177


>emb|CAN78503.1| hypothetical protein VITISV_023071 [Vitis vinifera]
          Length = 891

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 39/94 (41%), Positives = 58/94 (61%)
 Frame = -2

Query: 322 LSRLPSTENAIRTGTLSKRWKYLWTSVPTLIFEHKYDKRPQSDIVLFVSKTLIQCRQLKL 143
           LS LP  +  + T  LSKRW++LWT VP L+F  +   R     V  + KTL+  +  ++
Sbjct: 88  LSFLPM-KYVVATSILSKRWQFLWTMVPNLVFRFR---RRDEHFVNSIDKTLVLHQNSQI 143

Query: 142 RKFVVSIEYDIRFESLVNMWIRYAMIRNVEELDL 41
           +KF++   Y  +F+S VN+WIR+A  +NVEEL L
Sbjct: 144 KKFLIDFTYQSQFQSSVNVWIRHATRKNVEELHL 177


>emb|CBI23315.3| unnamed protein product [Vitis vinifera]
          Length = 340

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 35/84 (41%), Positives = 53/84 (63%)
 Frame = -2

Query: 292 IRTGTLSKRWKYLWTSVPTLIFEHKYDKRPQSDIVLFVSKTLIQCRQLKLRKFVVSIEYD 113
           + T  LSKRW++LWT VP L+F  +   R     V  + KTL+  +  +++KF++   Y 
Sbjct: 5   VATSILSKRWQFLWTMVPNLVFRFR---RRDEHFVNSIDKTLVLHQNSQIKKFLIDFTYQ 61

Query: 112 IRFESLVNMWIRYAMIRNVEELDL 41
            +F+S VN+WIR+A  +NVEEL L
Sbjct: 62  SQFQSSVNVWIRHATRKNVEELHL 85


>ref|XP_002300142.1| f-box family protein [Populus trichocarpa]
           gi|222847400|gb|EEE84947.1| f-box family protein
           [Populus trichocarpa]
          Length = 481

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
 Frame = -2

Query: 322 LSRLPSTENAIRTGTLSKRWKYLWTSVPTLIFEHKYDKRPQSD-IVLFVSKTLIQCRQLK 146
           LS LP+ ++AI+T  LSKRW  +WT VP LIF  +     +++   +FV K L+     K
Sbjct: 59  LSFLPA-DDAIKTCILSKRWDSIWTLVPNLIFRRECSCSQEAENFAVFVDKALMHYCSPK 117

Query: 145 LRKFVVSIEYDIRFESLVNMWIRYAMIRNVEELDL 41
           ++KF+V  E+   F++ V+ W+ +A+   VEEL L
Sbjct: 118 VKKFLVEFEFTECFKAQVDSWVDFAVRLKVEELCL 152


>ref|XP_002894201.1| hypothetical protein ARALYDRAFT_314380 [Arabidopsis lyrata subsp.
           lyrata] gi|297340043|gb|EFH70460.1| hypothetical protein
           ARALYDRAFT_314380 [Arabidopsis lyrata subsp. lyrata]
          Length = 353

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 37/97 (38%), Positives = 51/97 (52%)
 Frame = -2

Query: 322 LSRLPSTENAIRTGTLSKRWKYLWTSVPTLIFEHKYDKRPQSDIVLFVSKTLIQCRQLKL 143
           LS +P T+ AIRT  LSKRW+++W+  P+L F+  Y     S     + KTL      K+
Sbjct: 40  LSLIP-TKYAIRTSILSKRWRHVWSETPSLCFDDCYKVDADS-----IDKTLAHYMSRKI 93

Query: 142 RKFVVSIEYDIRFESLVNMWIRYAMIRNVEELDLSLG 32
             F +   Y +      N WI++AM RNVE L L  G
Sbjct: 94  MNFQLCTTYGVNLP--YNEWIKFAMSRNVENLFLDFG 128


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