BLASTX nr result

ID: Atractylodes21_contig00004072 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00004072
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529921.1| imidazole glycerol phosphate synthase subuni...    84   1e-14
ref|XP_002279105.1| PREDICTED: imidazole glycerol phosphate synt...    83   3e-14
ref|XP_002299945.1| predicted protein [Populus trichocarpa] gi|2...    82   4e-14
ref|XP_002313301.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13
ref|XP_004165871.1| PREDICTED: imidazole glycerol phosphate synt...    77   1e-12

>ref|XP_002529921.1| imidazole glycerol phosphate synthase subunit hisf, putative
           [Ricinus communis] gi|223530598|gb|EEF32475.1| imidazole
           glycerol phosphate synthase subunit hisf, putative
           [Ricinus communis]
          Length = 595

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 52/100 (52%), Positives = 62/100 (62%), Gaps = 10/100 (10%)
 Frame = -3

Query: 271 LKMEAATLGSS---QFTTVSGSIGSRR-------LPLKFHRNIISFKYPTKLSVRASAVR 122
           ++MEAA   SS   + T +  S  S         LP   ++N   FK P  LSVRAS+  
Sbjct: 1   MQMEAAPFSSSYSSKLTNLPSSSSSSSPSYSLISLPNNLYKNRSKFKPPRNLSVRASST- 59

Query: 121 GDDSAVTLLDYGAGNVQSIRNAIRYLGLDIKDVQTPEDIL 2
             DS VTLLDYGAGNV+S+RNAIRYLG  IKDVQ+P DIL
Sbjct: 60  -SDSVVTLLDYGAGNVRSVRNAIRYLGFQIKDVQSPADIL 98


>ref|XP_002279105.1| PREDICTED: imidazole glycerol phosphate synthase hisHF,
           chloroplastic [Vitis vinifera]
           gi|297737461|emb|CBI26662.3| unnamed protein product
           [Vitis vinifera]
          Length = 588

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 54/97 (55%), Positives = 60/97 (61%), Gaps = 9/97 (9%)
 Frame = -3

Query: 265 MEAAT-LGSSQFTTVSGSIGSRRLPLK--------FHRNIISFKYPTKLSVRASAVRGDD 113
           MEAA  L SSQ    S S  S   P          FHR  + FK  T LS+R S     D
Sbjct: 1   MEAAPPLASSQSRFFSSSFSSSSSPSSTPFILHRNFHRTNLKFKSRT-LSIRCSGAT--D 57

Query: 112 SAVTLLDYGAGNVQSIRNAIRYLGLDIKDVQTPEDIL 2
           + VTLLDYGAGNV+S+RNAIR+LG DIKDVQTPEDIL
Sbjct: 58  NVVTLLDYGAGNVRSVRNAIRFLGFDIKDVQTPEDIL 94


>ref|XP_002299945.1| predicted protein [Populus trichocarpa] gi|222847203|gb|EEE84750.1|
           predicted protein [Populus trichocarpa]
          Length = 584

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 55/95 (57%), Positives = 62/95 (65%), Gaps = 7/95 (7%)
 Frame = -3

Query: 265 MEAATLG---SSQFTTVSGSIGSRRLPLK--FHRNII--SFKYPTKLSVRASAVRGDDSA 107
           MEAA      +S F T S S  S  + L   F RN +   FK P  LSVRAS    DDS 
Sbjct: 1   MEAAPFTPPPTSSFKTPSISSSSSLIYLSKNFSRNHLPSKFKSPRNLSVRAS---NDDSV 57

Query: 106 VTLLDYGAGNVQSIRNAIRYLGLDIKDVQTPEDIL 2
           VTLLDYGAGNV+S+RNAIR+LG  IKDVQTP+DIL
Sbjct: 58  VTLLDYGAGNVRSVRNAIRHLGFQIKDVQTPKDIL 92


>ref|XP_002313301.1| predicted protein [Populus trichocarpa] gi|222849709|gb|EEE87256.1|
           predicted protein [Populus trichocarpa]
          Length = 583

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 50/94 (53%), Positives = 60/94 (63%), Gaps = 6/94 (6%)
 Frame = -3

Query: 265 MEAATLGSSQFTTVSGSIGSRRLPLKF----HRNIISFKYPTK--LSVRASAVRGDDSAV 104
           MEAA   S   T  + SI S    +      +RN   FK+ ++  LSVRAS    DDS V
Sbjct: 1   MEAAPFTSPSSTCKTSSISSSSSLISLSKISYRNHSPFKFKSRRNLSVRAS---NDDSVV 57

Query: 103 TLLDYGAGNVQSIRNAIRYLGLDIKDVQTPEDIL 2
           TLLDYGAGNV+S+RNAI +LG  IKDVQTP+DIL
Sbjct: 58  TLLDYGAGNVRSVRNAILHLGFQIKDVQTPKDIL 91


>ref|XP_004165871.1| PREDICTED: imidazole glycerol phosphate synthase hisHF,
           chloroplastic-like [Cucumis sativus]
          Length = 593

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 40/63 (63%), Positives = 48/63 (76%)
 Frame = -3

Query: 190 KFHRNIISFKYPTKLSVRASAVRGDDSAVTLLDYGAGNVQSIRNAIRYLGLDIKDVQTPE 11
           ++  + +  K   K +VRAS   G DS VTLLDYGAGNV+S+RNAIRYLG +IKDVQTPE
Sbjct: 39  RYKTHNLKVKSSGKFAVRASF--GSDSVVTLLDYGAGNVRSVRNAIRYLGFEIKDVQTPE 96

Query: 10  DIL 2
           DIL
Sbjct: 97  DIL 99


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